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Protein

50S ribosomal protein L15

Gene

rpl15

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15
Alternative name(s):
Hl9
Hmal15
Gene namesi
Name:rpl15
Ordered Locus Names:rrnAC1590
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved2 Publications
ChainiPRO_00001048602 – 16550S ribosomal protein L15Add BLAST164

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Interacts weakly with proteins L18e and L32e.2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC1590

Structurei

Secondary structure

1165
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP12737
SMRiP12737
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP12737

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG00779 Archaea
COG0200 LUCA
HOGENOMiHOG000231263
KOiK02876
OMAiWGRVGQH
OrthoDBiPOG093Z0MMR

Family and domain databases

Gene3Di4.10.990.10, 1 hit
HAMAPiMF_01341 Ribosomal_L15, 1 hit
InterProiView protein in InterPro
IPR027386 50S_Rbsml_prot_L15_N
IPR036227 L18e/L15P_sf
IPR030878 Ribosomal_L15
IPR001196 Ribosomal_L15_CS
IPR021131 Ribosomal_L18e/L15P
PfamiView protein in Pfam
PF00828 Ribosomal_L27A, 1 hit
SUPFAMiSSF52080 SSF52080, 1 hit
PROSITEiView protein in PROSITE
PS00475 RIBOSOMAL_L15, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P12737-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTSKKKRQRG SRTHGGGSHK NRRGAGHRGG RGDAGRDKHE FHNHEPLGKS
60 70 80 90 100
GFKRPQKVQE EAATIDVREI DENVTLLAAD DVAEVEDGGF RVDVRDVVEE
110 120 130 140 150
ADDADYVKVL GAGQVRHELT LIADDFSEGA REKVEGAGGS VELTDLGEER
160
QAEAEETEDA DADEE
Length:165
Mass (Da):17,973
Last modified:January 23, 2007 - v4
Checksum:iAAF4318ADF0D8879
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti2T → D AA sequence (PubMed:3196689).Curated1
Sequence conflicti31 – 32RG → NR AA sequence (PubMed:3196689).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X63127 Genomic DNA Translation: CAA44837.1
AY596297 Genomic DNA Translation: AAV46508.1
X58395 Genomic DNA Translation: CAA41293.1
PIRiS22349 R6HS15
RefSeqiWP_011223737.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV46508; AAV46508; rrnAC1590
GeneIDi3128809
KEGGihma:rrnAC1590
PATRICifig|272569.17.peg.2279

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X63127 Genomic DNA Translation: CAA44837.1
AY596297 Genomic DNA Translation: AAV46508.1
X58395 Genomic DNA Translation: CAA41293.1
PIRiS22349 R6HS15
RefSeqiWP_011223737.1, NC_006396.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40J2-165[»]
1JJ2X-ray2.40K2-165[»]
1K73X-ray3.01M2-165[»]
1K8AX-ray3.00M2-165[»]
1K9MX-ray3.00M2-165[»]
1KC8X-ray3.01M2-165[»]
1KD1X-ray3.00M2-165[»]
1KQSX-ray3.10K2-165[»]
1M1KX-ray3.20M2-165[»]
1M90X-ray2.80M2-165[»]
1N8RX-ray3.00M2-165[»]
1NJIX-ray3.00M2-165[»]
1Q7YX-ray3.20M2-165[»]
1Q81X-ray2.95M2-165[»]
1Q82X-ray2.98M2-165[»]
1Q86X-ray3.00M2-165[»]
1QVFX-ray3.10K2-165[»]
1QVGX-ray2.90K2-165[»]
1S72X-ray2.40L1-165[»]
1VQ4X-ray2.70L1-165[»]
1VQ5X-ray2.60L1-165[»]
1VQ6X-ray2.70L1-165[»]
1VQ7X-ray2.50L1-165[»]
1VQ8X-ray2.20L1-165[»]
1VQ9X-ray2.40L1-165[»]
1VQKX-ray2.30L1-165[»]
1VQLX-ray2.30L1-165[»]
1VQMX-ray2.30L1-165[»]
1VQNX-ray2.40L1-165[»]
1VQOX-ray2.20L1-165[»]
1VQPX-ray2.25L1-165[»]
1W2BX-ray3.50K2-165[»]
1YHQX-ray2.40L1-165[»]
1YI2X-ray2.65L1-165[»]
1YIJX-ray2.60L1-165[»]
1YITX-ray2.80L1-165[»]
1YJ9X-ray2.90L1-165[»]
1YJNX-ray3.00L1-165[»]
1YJWX-ray2.90L1-165[»]
2OTJX-ray2.90L1-165[»]
2OTLX-ray2.70L1-165[»]
2QA4X-ray3.00L1-165[»]
2QEXX-ray2.90L1-165[»]
3CC2X-ray2.40L1-165[»]
3CC4X-ray2.70L1-165[»]
3CC7X-ray2.70L1-165[»]
3CCEX-ray2.75L1-165[»]
3CCJX-ray2.70L1-165[»]
3CCLX-ray2.90L1-165[»]
3CCMX-ray2.55L1-165[»]
3CCQX-ray2.90L1-165[»]
3CCRX-ray3.00L1-165[»]
3CCSX-ray2.95L1-165[»]
3CCUX-ray2.80L1-165[»]
3CCVX-ray2.90L1-165[»]
3CD6X-ray2.75L1-165[»]
3CMAX-ray2.80L1-165[»]
3CMEX-ray2.95L1-165[»]
3CPWX-ray2.70K1-165[»]
3CXCX-ray3.00K2-165[»]
3G4SX-ray3.20L1-165[»]
3G6EX-ray2.70L1-165[»]
3G71X-ray2.85L1-165[»]
3I55X-ray3.11L1-165[»]
3I56X-ray2.90L1-165[»]
3OW2X-ray2.70K2-151[»]
4ADXelectron microscopy6.60L1-165[»]
4V4RX-ray5.90P2-165[»]
4V4SX-ray6.76P2-165[»]
4V4TX-ray6.46P2-165[»]
4V9FX-ray2.40L1-165[»]
ProteinModelPortaliP12737
SMRiP12737
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC1590

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV46508; AAV46508; rrnAC1590
GeneIDi3128809
KEGGihma:rrnAC1590
PATRICifig|272569.17.peg.2279

Phylogenomic databases

eggNOGiarCOG00779 Archaea
COG0200 LUCA
HOGENOMiHOG000231263
KOiK02876
OMAiWGRVGQH
OrthoDBiPOG093Z0MMR

Miscellaneous databases

EvolutionaryTraceiP12737

Family and domain databases

Gene3Di4.10.990.10, 1 hit
HAMAPiMF_01341 Ribosomal_L15, 1 hit
InterProiView protein in InterPro
IPR027386 50S_Rbsml_prot_L15_N
IPR036227 L18e/L15P_sf
IPR030878 Ribosomal_L15
IPR001196 Ribosomal_L15_CS
IPR021131 Ribosomal_L18e/L15P
PfamiView protein in Pfam
PF00828 Ribosomal_L27A, 1 hit
SUPFAMiSSF52080 SSF52080, 1 hit
PROSITEiView protein in PROSITE
PS00475 RIBOSOMAL_L15, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL15_HALMA
AccessioniPrimary (citable) accession number: P12737
Secondary accession number(s): Q5V1U4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: January 23, 2007
Last modified: November 7, 2018
This is version 136 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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