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Protein

50S ribosomal protein L18e

Gene

rpl18e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain II) to which it binds.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18e
Alternative name(s):
Hl29
L19
Gene namesi
Name:rpl18e
Ordered Locus Names:rrnAC0064
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved2 Publications
ChainiPRO_00001327872 – 11650S ribosomal protein L18eAdd BLAST115

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Interacts weakly with proteins L4 and L15. Has been cross-linked to L4.2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC0064

Structurei

Secondary structure

1116
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP12733
SMRiP12733
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP12733

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG00780 Archaea
COG1727 LUCA
HOGENOMiHOG000225300
KOiK02883
OMAiVAAWKFS
OrthoDBiPOG093Z0GOZ

Family and domain databases

HAMAPiMF_00329 Ribosomal_L18e, 1 hit
InterProiView protein in InterPro
IPR036227 L18e/L15P_sf
IPR001196 Ribosomal_L15_CS
IPR000039 Ribosomal_L18e
IPR021131 Ribosomal_L18e/L15P
IPR022947 Ribosomal_L18e_arc
IPR021132 Ribosomal_L18e_CS
PANTHERiPTHR10934 PTHR10934, 1 hit
PfamiView protein in Pfam
PF00828 Ribosomal_L27A, 1 hit
SUPFAMiSSF52080 SSF52080, 1 hit
PROSITEiView protein in PROSITE
PS01106 RIBOSOMAL_L18E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P12733-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSKTNPRLSS LIADLKSAAR SSGGAVWGDV AERLEKPRRT HAEVNLGRIE
60 70 80 90 100
RYAQEDETVV VPGKVLGSGV LQKDVTVAAV DFSGTAETKI DQVGEAVSLE
110
QAIENNPEGS HVRVIR
Length:116
Mass (Da):12,422
Last modified:January 23, 2007 - v2
Checksum:iBFACD702AE94474D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M76567 Genomic DNA Translation: AAA73096.1
AY596297 Genomic DNA Translation: AAV45144.1
M87833 Genomic DNA Translation: AAA73213.1
PIRiA41715 R5HSH9
RefSeqiWP_004516800.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV45144; AAV45144; rrnAC0064
GeneIDi35219456
KEGGihma:rrnAC0064
PATRICifig|272569.17.peg.872

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M76567 Genomic DNA Translation: AAA73096.1
AY596297 Genomic DNA Translation: AAV45144.1
M87833 Genomic DNA Translation: AAA73213.1
PIRiA41715 R5HSH9
RefSeqiWP_004516800.1, NC_006396.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40L2-116[»]
1JJ2X-ray2.40N2-116[»]
1K73X-ray3.01P2-116[»]
1K8AX-ray3.00P2-116[»]
1K9MX-ray3.00P2-116[»]
1KC8X-ray3.01P2-116[»]
1KD1X-ray3.00P2-116[»]
1KQSX-ray3.10N2-116[»]
1M1KX-ray3.20P2-116[»]
1M90X-ray2.80P2-116[»]
1N8RX-ray3.00P2-116[»]
1NJIX-ray3.00P2-116[»]
1Q7YX-ray3.20P2-116[»]
1Q81X-ray2.95P2-116[»]
1Q82X-ray2.98P2-116[»]
1Q86X-ray3.00P2-116[»]
1QVFX-ray3.10N2-116[»]
1QVGX-ray2.90N2-116[»]
1S72X-ray2.40O1-116[»]
1VQ4X-ray2.70O1-116[»]
1VQ5X-ray2.60O1-116[»]
1VQ6X-ray2.70O1-116[»]
1VQ7X-ray2.50O1-116[»]
1VQ8X-ray2.20O1-116[»]
1VQ9X-ray2.40O1-116[»]
1VQKX-ray2.30O1-116[»]
1VQLX-ray2.30O1-116[»]
1VQMX-ray2.30O1-116[»]
1VQNX-ray2.40O1-116[»]
1VQOX-ray2.20O1-116[»]
1VQPX-ray2.25O1-116[»]
1W2BX-ray3.50N2-116[»]
1YHQX-ray2.40O1-116[»]
1YI2X-ray2.65O1-116[»]
1YIJX-ray2.60O1-116[»]
1YITX-ray2.80O1-116[»]
1YJ9X-ray2.90O1-116[»]
1YJNX-ray3.00O1-116[»]
1YJWX-ray2.90O1-116[»]
2OTJX-ray2.90O1-116[»]
2OTLX-ray2.70O1-116[»]
2QA4X-ray3.00O1-116[»]
2QEXX-ray2.90O1-116[»]
3CC2X-ray2.40O1-116[»]
3CC4X-ray2.70O1-116[»]
3CC7X-ray2.70O1-116[»]
3CCEX-ray2.75O1-116[»]
3CCJX-ray2.70O1-116[»]
3CCLX-ray2.90O1-116[»]
3CCMX-ray2.55O1-116[»]
3CCQX-ray2.90O1-116[»]
3CCRX-ray3.00O1-116[»]
3CCSX-ray2.95O1-116[»]
3CCUX-ray2.80O1-116[»]
3CCVX-ray2.90O1-116[»]
3CD6X-ray2.75O1-116[»]
3CMAX-ray2.80O1-116[»]
3CMEX-ray2.95O1-116[»]
3CPWX-ray2.70N1-116[»]
3CXCX-ray3.00N2-116[»]
3G4SX-ray3.20O2-116[»]
3G6EX-ray2.70O2-116[»]
3G71X-ray2.85O2-116[»]
3I55X-ray3.11O1-116[»]
3I56X-ray2.90O1-116[»]
3OW2X-ray2.70N2-116[»]
4ADXelectron microscopy6.60O1-116[»]
4V9FX-ray2.40O1-116[»]
ProteinModelPortaliP12733
SMRiP12733
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC0064

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV45144; AAV45144; rrnAC0064
GeneIDi35219456
KEGGihma:rrnAC0064
PATRICifig|272569.17.peg.872

Phylogenomic databases

eggNOGiarCOG00780 Archaea
COG1727 LUCA
HOGENOMiHOG000225300
KOiK02883
OMAiVAAWKFS
OrthoDBiPOG093Z0GOZ

Miscellaneous databases

EvolutionaryTraceiP12733

Family and domain databases

HAMAPiMF_00329 Ribosomal_L18e, 1 hit
InterProiView protein in InterPro
IPR036227 L18e/L15P_sf
IPR001196 Ribosomal_L15_CS
IPR000039 Ribosomal_L18e
IPR021131 Ribosomal_L18e/L15P
IPR022947 Ribosomal_L18e_arc
IPR021132 Ribosomal_L18e_CS
PANTHERiPTHR10934 PTHR10934, 1 hit
PfamiView protein in Pfam
PF00828 Ribosomal_L27A, 1 hit
SUPFAMiSSF52080 SSF52080, 1 hit
PROSITEiView protein in PROSITE
PS01106 RIBOSOMAL_L18E, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL18E_HALMA
AccessioniPrimary (citable) accession number: P12733
Secondary accession number(s): Q5V5Q8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: January 23, 2007
Last modified: October 10, 2018
This is version 134 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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