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Entry version 171 (08 May 2019)
Sequence version 2 (25 Oct 2005)
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Protein

Zinc finger protein 27

Gene

Zfp27

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri205 – 227C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri233 – 255C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri261 – 283C2H2-type 3PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri289 – 311C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri317 – 339C2H2-type 5PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri345 – 367C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri401 – 423C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri429 – 451C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri457 – 479C2H2-type 9PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri485 – 507C2H2-type 10PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri513 – 535C2H2-type 11PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri541 – 563C2H2-type 12PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri569 – 591C2H2-type 13PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri597 – 619C2H2-type 14PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri625 – 647C2H2-type 15PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri653 – 675C2H2-type 16PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri681 – 703C2H2-type 17PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri709 – 731C2H2-type 18PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri737 – 759C2H2-type 19PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri765 – 787C2H2-type 20PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri793 – 815C2H2-type 21PROSITE-ProRule annotationAdd BLAST23

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • DNA binding Source: GO_Central
  • metal ion binding Source: UniProtKB-KW

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-MMU-212436 Generic Transcription Pathway

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Zinc finger protein 27
Short name:
Zfp-27
Alternative name(s):
Protein mKR4
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Zfp27
Synonyms:Mkr4, Zfp-27
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 7

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:99174 Zfp27

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000472881 – 819Zinc finger protein 27Add BLAST819

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
P10077

PRoteomics IDEntifications database

More...
PRIDEi
P10077

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
P10077

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
P10077

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000062040 Expressed in 178 organ(s), highest expression level in ureteric bud trunk

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
P10077 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
204653, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000123953

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
P10077

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 75KRABPROSITE-ProRule annotationAdd BLAST75

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri205 – 227C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri233 – 255C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri261 – 283C2H2-type 3PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri289 – 311C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri317 – 339C2H2-type 5PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri345 – 367C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri401 – 423C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri429 – 451C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri457 – 479C2H2-type 9PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri485 – 507C2H2-type 10PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri513 – 535C2H2-type 11PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri541 – 563C2H2-type 12PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri569 – 591C2H2-type 13PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri597 – 619C2H2-type 14PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri625 – 647C2H2-type 15PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri653 – 675C2H2-type 16PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri681 – 703C2H2-type 17PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri709 – 731C2H2-type 18PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri737 – 759C2H2-type 19PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri765 – 787C2H2-type 20PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri793 – 815C2H2-type 21PROSITE-ProRule annotationAdd BLAST23

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1721 Eukaryota
COG5048 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000166306

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000234617

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P10077

KEGG Orthology (KO)

More...
KOi
K09228

Identification of Orthologs from Complete Genome Data

More...
OMAi
LNVHQSI

Database of Orthologous Groups

More...
OrthoDBi
1318335at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
P10077

TreeFam database of animal gene trees

More...
TreeFami
TF343410

Family and domain databases

Conserved Domains Database

More...
CDDi
cd07765 KRAB_A-box, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 19 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 21 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 12 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 21 hits
PS50157 ZINC_FINGER_C2H2_2, 22 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: P10077-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MDVTIDFSRE EWQHLDPAQR SLYRDVVQET YSHLRSVEEL QQIGDQKKTY
60 70 80 90 100
QQIGHKSASD MVFITKTLGA ESCHDYSGVR KVIHVNSYIV LPPKRPRHWD
110 120 130 140 150
PPEDEPKHSS DLQTHDESNG LKRTKRITEY GKISSCINTE HILTGEKLPD
160 170 180 190 200
HNQCGKVLGY KQIPCQYQKI HTGEKSYECA EFGKIFTQKS QLRVHVTSPT
210 220 230 240 250
GEKLYVCVEC GKACSQTSEF LTHQKTHTRE KPYKCGDCGK SFFQVSSLFR
260 270 280 290 300
HRRIHTGEKL YDCSHCGKGF SYNSDLRIHQ KIHTGEKRHG CVDCGKAFTQ
310 320 330 340 350
KSTLRMHQKI HTGERAYVCI ECGQAFIQKT HLVAHRRIHT GEKPYACDGC
360 370 380 390 400
GKAFLSKSQL LVHQRIHSRV RPCVSLDRAK PFSSAPNLLP RKKVQMREKS
410 420 430 440 450
SICAECGKAF TYRSELIIHQ RTHTGEKPYQ CGDCGKAFTQ KSALTVHRRI
460 470 480 490 500
HTGEKSYVCV KCGLAFVQRA HLDAHQVIHT GEKPYQCGHC GKFFTSKSQL
510 520 530 540 550
HVHKRIHTGE KPYVCSNCGK AFANRSNLIT HQKTHTGEKA YVCARCGKAF
560 570 580 590 600
TQRSDLVTHQ RIHTGEKPYG CSTCGKAFTQ KSHLSIHEKI HTGERQYGCR
610 620 630 640 650
DCGKAFNQKS ILIVHQKIHT GEKPHVCAEC GRAFIRKSNF ITHQRIHTGE
660 670 680 690 700
KPYGCTDCGK SFTSKSQLLV HRPIHTGEKP YVCAECGKAF SGRSNLSKHQ
710 720 730 740 750
KTHTGEKPYA CSECGKSFRQ KSELITHHRI HTGEKPYDCG DCGKSFTKKS
760 770 780 790 800
QLQVHQRIHT GEKPYRCAEC GKAFTDRSNL NKHQTTHTGE KPYKCVVCGK
810
GFVQKSVLSI HENVHTSAV
Length:819
Mass (Da):92,894
Last modified:October 25, 2005 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC714C5850E2AA2BB
GO
Isoform 2 (identifier: P10077-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     337-364: Missing.

Show »
Length:791
Mass (Da):89,824
Checksum:i8FEC81DF36878756
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAA31106 differs from that shown. Reason: Frameshift at position 254.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti59S → N in BAC25981 (PubMed:16141072).Curated1
Sequence conflicti555 – 556DL → EP in AAA37119 (PubMed:3143103).Curated2
Sequence conflicti555 – 556DL → EP in CAA31106 (PubMed:3143103).Curated2
Sequence conflicti572 – 573ST → RP in AAA37119 (PubMed:3143103).Curated2
Sequence conflicti572 – 573ST → RP in CAA31106 (PubMed:3143103).Curated2
Sequence conflicti625H → Q in AAA37119 (PubMed:3143103).Curated1
Sequence conflicti625H → Q in CAA31106 (PubMed:3143103).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_016025337 – 364Missing in isoform 2. 1 PublicationAdd BLAST28

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK028500 mRNA Translation: BAC25981.1
AK135293 mRNA Translation: BAE22479.1
AK147732 mRNA Translation: BAE28102.1
BC059037 mRNA Translation: AAH59037.1
M36515 mRNA Translation: AAA37119.1 Frameshift.
X12593 mRNA Translation: CAA31106.1 Frameshift.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS21076.1 [P10077-1]

Protein sequence database of the Protein Information Resource

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PIRi
S03678

NCBI Reference Sequences

More...
RefSeqi
NP_001032796.1, NM_001037707.1 [P10077-1]
NP_001272726.1, NM_001285797.1 [P10077-1]
NP_001272727.1, NM_001285798.1 [P10077-1]
NP_035884.2, NM_011754.2 [P10077-1]
XP_011248783.1, XM_011250481.2 [P10077-1]
XP_011248784.1, XM_011250482.2 [P10077-1]
XP_017177621.1, XM_017322132.1 [P10077-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000053521; ENSMUSP00000054012; ENSMUSG00000062040 [P10077-1]
ENSMUST00000159920; ENSMUSP00000125232; ENSMUSG00000062040 [P10077-1]
ENSMUST00000161904; ENSMUSP00000124684; ENSMUSG00000062040 [P10077-1]
ENSMUST00000162592; ENSMUSP00000123953; ENSMUSG00000062040 [P10077-1]
ENSMUST00000172448; ENSMUSP00000127677; ENSMUSG00000062040 [P10077-1]

Database of genes from NCBI RefSeq genomes

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GeneIDi
22689

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:22689

UCSC genome browser

More...
UCSCi
uc009gcl.1 mouse [P10077-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK028500 mRNA Translation: BAC25981.1
AK135293 mRNA Translation: BAE22479.1
AK147732 mRNA Translation: BAE28102.1
BC059037 mRNA Translation: AAH59037.1
M36515 mRNA Translation: AAA37119.1 Frameshift.
X12593 mRNA Translation: CAA31106.1 Frameshift.
CCDSiCCDS21076.1 [P10077-1]
PIRiS03678
RefSeqiNP_001032796.1, NM_001037707.1 [P10077-1]
NP_001272726.1, NM_001285797.1 [P10077-1]
NP_001272727.1, NM_001285798.1 [P10077-1]
NP_035884.2, NM_011754.2 [P10077-1]
XP_011248783.1, XM_011250481.2 [P10077-1]
XP_011248784.1, XM_011250482.2 [P10077-1]
XP_017177621.1, XM_017322132.1 [P10077-1]

3D structure databases

SMRiP10077
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi204653, 1 interactor
STRINGi10090.ENSMUSP00000123953

PTM databases

iPTMnetiP10077
PhosphoSitePlusiP10077

Proteomic databases

PaxDbiP10077
PRIDEiP10077

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000053521; ENSMUSP00000054012; ENSMUSG00000062040 [P10077-1]
ENSMUST00000159920; ENSMUSP00000125232; ENSMUSG00000062040 [P10077-1]
ENSMUST00000161904; ENSMUSP00000124684; ENSMUSG00000062040 [P10077-1]
ENSMUST00000162592; ENSMUSP00000123953; ENSMUSG00000062040 [P10077-1]
ENSMUST00000172448; ENSMUSP00000127677; ENSMUSG00000062040 [P10077-1]
GeneIDi22689
KEGGimmu:22689
UCSCiuc009gcl.1 mouse [P10077-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
22689
MGIiMGI:99174 Zfp27

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00940000166306
HOGENOMiHOG000234617
InParanoidiP10077
KOiK09228
OMAiLNVHQSI
OrthoDBi1318335at2759
PhylomeDBiP10077
TreeFamiTF343410

Enzyme and pathway databases

ReactomeiR-MMU-212436 Generic Transcription Pathway

Miscellaneous databases

Protein Ontology

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PROi
PR:P10077

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000062040 Expressed in 178 organ(s), highest expression level in ureteric bud trunk
GenevisibleiP10077 MM

Family and domain databases

CDDicd07765 KRAB_A-box, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 19 hits
SMARTiView protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 21 hits
SUPFAMiSSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 12 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 21 hits
PS50157 ZINC_FINGER_C2H2_2, 22 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiZFP27_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P10077
Secondary accession number(s): Q6PCZ6, Q8CED4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: October 25, 2005
Last modified: May 8, 2019
This is version 171 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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