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UniProtKB - P0DPB4 (SCHI1_MOUSE)

Entry version 15 (08 May 2019)
Sequence version 1 (22 Nov 2017)
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Protein

Schwannomin-interacting protein 1

Gene

Schip1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Schwannomin-interacting protein 11 Publication
Short name:
SCHIP-11 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Schip1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:1353557 Schip1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Mice lacking all isoforms encoded by both Schip1 and Iqcj-Schip1 are fertile and survive as long as wild-type mice. However, they exhibit mild growth delay associated with ataxia and reduced pain sensitivity. They display decreased thickness of the piriform cortex and partial agenesis of the anterior comissure which could be due to impaired axon elongation and guidance. The morphology of nodes of Ranvier is affected but nerves do not exhibit significant electrophysiological characteristic differences. A reduction in the number of axonal projections in the peripheral nerve system is also observed.2 Publications

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002889281 – 484Schwannomin-interacting protein 1Add BLAST484

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		P0DPB4 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q3TI53 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homooligomer (via coiled coil domain) (By similarity).

Interacts with NF2; the interaction is direct (By similarity).

Interacts with ANK3 (By similarity).

By similarity

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
NF2P352402EBI-1397475,EBI-1014472From Homo sapiens.

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

Protein interaction database and analysis system

More...IntActi		P0DPB4, 1 interactor

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000029346

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P0DPB4

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili421 – 455Sequence analysisAdd BLAST35

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi33 – 67Ser-richAdd BLAST35
Compositional biasi99 – 104Poly-Glu6

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the SCHIP1 family.Curated

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coil

Phylogenomic databases

Ensembl GeneTree

More...GeneTreei		ENSGT00390000011127

Identification of Orthologs from Complete Genome Data

More...OMAi		LYTSCSK

Database of Orthologous Groups

More...OrthoDBi		1290403at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR039045 SCHIP_1
IPR015649 SCHIP_1_C

The PANTHER Classification System

More...PANTHERi		PTHR13103 PTHR13103, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF10148 SCHIP-1, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (6+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 6 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 6 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform Schip1-1 (identifier: P0DPB4-1) [UniParc]FASTAAdd to basket
Also known as: Schip-1a1 Publication

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MERSEQRVRA AWDCDPGKQA DRDYREDGMD LGSDAGSSSS SRASSQSNST 
        60         70         80         90        100
KVTPCSECKS SSSPGGSLDL VSALEDYEEP FPVYQKKVID EWAPEEDGEE 
       110        120        130        140        150
EEEEDDRGYR DDGCPAREPG DVSARIGSSG SGSRSAATTM PSPMPNGNLH 
       160        170        180        190        200
PHDPQDLRHN GNVVVAGRPN ASRVPRRPIQ KTQPPGSRRG GRNRASGGLC 
       210        220        230        240        250
LQPPDGGTRV PEEPPAPPMD WEALEKHLAG LQFREQEVRN QGQARTNSTS 
       260        270        280        290        300
AQKNERESIR QKLALGSFFD DGPGIYTSCS KSGKPSLSAR LQSGMNLQIC 
       310        320        330        340        350
FVNDSGSDKD SDADDSKTET SLDTPLSPMS KQSSSYSDRD TTEEESESLD 
       360        370        380        390        400
DMDFLTRQKK LQAEAKMALA MAKPMAKMQV EVEKQNRKKS PVADLLPHMP 
       410        420        430        440        450
HISECLMKRS LKPTDLRDMT IGQLQVIVND LHSQIESLNE ELVQLLLIRD 
       460        470        480 
ELHTEQDAML VDIEDLTRHA ESQQKHMAEK MPAK
Length:484
Mass (Da):53,306
Last modified:November 22, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD6940356290904EC
GO
Isoform Schip1-2 (identifier: P0DPB4-2) [UniParc] [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-28: Missing.

Show »
Length:456
Mass (Da):49,983
Checksum:iF4A0CECB79EDF3AC
GO
Isoform Schip1-3 (identifier: P0DPB4-3) [UniParc] [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-240: Missing.
     241-250: QGQARTNSTS → MVHQENCSYQ

Show »
Length:244
Mass (Da):27,490
Checksum:i0E710D6280F10CB9
GO
Isoform Schip1-4 (identifier: P0DPB4-4) [UniParc] [UniParc]FASTAAdd to basket
Also known as: Schip-1b1 Publication

The sequence of this isoform differs from the canonical sequence as follows:
     23-250: Missing.

Show »
Length:256
Mass (Da):28,857
Checksum:iA4654471898FE59C
GO
Isoform Iqcj-schip1-1 (identifier: A0A088MLT8-1) [UniParc]FASTAAdd to basket
Also known as: IQCJ-SCHIP-1
The sequence of this isoform can be found in the external entry A0A088MLT8.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Based on a naturally occurring readthrough transcript which produces an IQCJ-SCHIP1 fusion protein.1 Publication
Length:559
Mass (Da):61,917
GO
Isoform Iqcj-schip1-2 (identifier: A0A088MLT8-2) [UniParc]FASTAAdd to basket
The sequence of this isoform can be found in the external entry A0A088MLT8.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Based on a naturally occurring readthrough transcript which produces an IQCJ-SCHIP1 fusion protein.1 Publication
Length:331
Mass (Da):37,467
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
S4R1J0S4R1J0_MOUSE
Schwannomin interacting protein 1 i...
Schip1
261Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0A6YXQ5A0A0A6YXQ5_MOUSE
Schwannomin-interacting protein 1
Schip1
388Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH94348 differs from that shown. Aberrant splicing.Curated
The sequence AAH94348 differs from that shown. Reason: Frameshift at position 389.Curated
The sequence BAB32387 differs from that shown. Probable cloning artifact.Curated
The sequence BAB32387 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti166A → V in AAF34244 (PubMed:10669747).Curated1
Sequence conflicti384K → R in BAB32387 (PubMed:16141072).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0258311 – 240Missing in isoform Schip1-3. 2 PublicationsAdd BLAST240
Alternative sequenceiVSP_0461191 – 28Missing in isoform Schip1-2. 2 PublicationsAdd BLAST28
Alternative sequenceiVSP_04612123 – 250Missing in isoform Schip1-4. 1 PublicationAdd BLAST228
Alternative sequenceiVSP_025834241 – 250QGQARTNSTS → MVHQENCSYQ in isoform Schip1-3. 2 Publications10

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
EU163407 mRNA Translation: ABW06760.1
EU163408 mRNA Translation: ABW06761.1
AK021361 mRNA Translation: BAB32387.1 Sequence problems.
AK168005 mRNA Translation: BAE39993.1
AK146930 mRNA Translation: BAE27541.1
AC093360 Genomic DNA No translation available.
AC114675 Genomic DNA No translation available.
AC121306 Genomic DNA No translation available.
AC122913 Genomic DNA No translation available.
AC164401 Genomic DNA No translation available.
BC060529 mRNA Translation: AAH60529.1
BC094348 mRNA Translation: AAH94348.1 Sequence problems.
AF145716 mRNA Translation: AAF34244.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS50926.1
CCDS50927.1 [P0DPB4-4]
CCDS50929.1 [P0DPB4-3]
CCDS71249.1 [P0DPB4-2]

NCBI Reference Sequences

More...RefSeqi		NP_001106891.1, NM_001113420.1 [P0DPB4-4]
NP_001106892.1, NM_001113421.1 [P0DPB4-1]
NP_001268973.1, NM_001282044.1 [P0DPB4-2]
NP_001268974.1, NM_001282045.1 [P0DPB4-2]
NP_038956.2, NM_013928.5 [P0DPB4-3]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000029346; ENSMUSP00000029346; ENSMUSG00000027777 [P0DPB4-1]
ENSMUST00000169909; ENSMUSP00000129152; ENSMUSG00000027777 [P0DPB4-4]
ENSMUST00000170788; ENSMUSP00000126443; ENSMUSG00000027777 [P0DPB4-3]
ENSMUST00000182532; ENSMUSP00000138245; ENSMUSG00000027777 [P0DPB4-2]
ENSMUST00000182719; ENSMUSP00000138207; ENSMUSG00000027777 [P0DPB4-2]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		30953

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:30953

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU163407 mRNA Translation: ABW06760.1
EU163408 mRNA Translation: ABW06761.1
AK021361 mRNA Translation: BAB32387.1 Sequence problems.
AK168005 mRNA Translation: BAE39993.1
AK146930 mRNA Translation: BAE27541.1
AC093360 Genomic DNA No translation available.
AC114675 Genomic DNA No translation available.
AC121306 Genomic DNA No translation available.
AC122913 Genomic DNA No translation available.
AC164401 Genomic DNA No translation available.
BC060529 mRNA Translation: AAH60529.1
BC094348 mRNA Translation: AAH94348.1 Sequence problems.
AF145716 mRNA Translation: AAF34244.1
CCDSiCCDS50926.1
CCDS50927.1 [P0DPB4-4]
CCDS50929.1 [P0DPB4-3]
CCDS71249.1 [P0DPB4-2]
RefSeqiNP_001106891.1, NM_001113420.1 [P0DPB4-4]
NP_001106892.1, NM_001113421.1 [P0DPB4-1]
NP_001268973.1, NM_001282044.1 [P0DPB4-2]
NP_001268974.1, NM_001282045.1 [P0DPB4-2]
NP_038956.2, NM_013928.5 [P0DPB4-3]

3D structure databases

SMRiP0DPB4
ModBaseiSearch...

Protein-protein interaction databases

IntActiP0DPB4, 1 interactor
STRINGi10090.ENSMUSP00000029346

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000029346; ENSMUSP00000029346; ENSMUSG00000027777 [P0DPB4-1]
ENSMUST00000169909; ENSMUSP00000129152; ENSMUSG00000027777 [P0DPB4-4]
ENSMUST00000170788; ENSMUSP00000126443; ENSMUSG00000027777 [P0DPB4-3]
ENSMUST00000182532; ENSMUSP00000138245; ENSMUSG00000027777 [P0DPB4-2]
ENSMUST00000182719; ENSMUSP00000138207; ENSMUSG00000027777 [P0DPB4-2]
GeneIDi30953
KEGGimmu:30953

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		29970
MGIiMGI:1353557 Schip1

Phylogenomic databases

GeneTreeiENSGT00390000011127
OMAiLYTSCSK
OrthoDBi1290403at2759

Miscellaneous databases

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

ExpressionAtlasiP0DPB4 baseline and differential
GenevisibleiQ3TI53 MM

Family and domain databases

InterProiView protein in InterPro
IPR039045 SCHIP_1
IPR015649 SCHIP_1_C
PANTHERiPTHR13103 PTHR13103, 1 hit
PfamiView protein in Pfam
PF10148 SCHIP-1, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSCHI1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P0DPB4
Secondary accession number(s): A8IJC6
, A8IJD0, A8IJD3, F6YL02, F8WI70, Q3TI53, Q52KH1, Q6P9Y8, Q9CX07, Q9JLR0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2017
Last sequence update: November 22, 2017
Last modified: May 8, 2019
This is version 15 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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