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UniProtKB - P0DOY8 (RL6_THET8)

Entry version 37 (25 May 2022)
Sequence version 1 (15 Mar 2017)
Previous versions | rss
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Protein

50S ribosomal protein L6

Gene

rplF

Organism
Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
50S ribosomal protein L6UniRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:rplFUniRule annotation
Ordered Locus Names:TTHA1677
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiThermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri300852 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000532 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemoved1 Publication
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001310722 – 18050S ribosomal protein L6Add BLAST179

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

Protein interaction database and analysis system

More...IntActi		P0DOY8, 6 interactors

STRING: functional protein association networks

More...STRINGi		300852.55773059

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1180
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

AlphaFold Protein Structure Database

More...AlphaFoldDBi		P0DOY8

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P0DOY8

Database of comparative protein structure models

More...ModBasei		Search...

Protein Data Bank in Europe - Knowledge Base

More...PDBe-KBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the universal ribosomal protein uL6 family.UniRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		COG0097, Bacteria

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_065464_1_2_0

Identification of Orthologs from Complete Genome Data

More...OMAi		KPDPYKG

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.90.930.12, 2 hits

HAMAP database of protein families

More...HAMAPi		MF_01365_B, Ribosomal_L6_B, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR000702, Ribosomal_L6
IPR020040, Ribosomal_L6_a/b-dom
IPR036789, Ribosomal_L6_a/b-dom_sf
IPR019906, Ribosomal_L6_bac-type

The PANTHER Classification System

More...PANTHERi		PTHR11655, PTHR11655, 1 hit
PTHR11655:SF14, PTHR11655:SF14, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00347, Ribosomal_L6, 2 hits

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF002162, Ribosomal_L6, 1 hit

Protein Motif fingerprint database; a protein domain database

More...PRINTSi		PR00059, RIBOSOMALL6

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF56053, SSF56053, 2 hits

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR03654, L6_bact, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P0DOY8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRIGRLPIP VPKGVSVEVA PGRVKVKGPK GELEVPVSPE MRVVVEEGVV 
        60         70         80         90        100
RVERPSDERR HKSLHGLTRT LIANAVKGVS EGYSKELLIK GIGYRARLVG 
       110        120        130        140        150
RALELTVGFS HPVVVEPPEG ITFEVPEPTR VRVSGIDKQK VGQVAANIRA 
       160        170        180
IRKPSAYHEK GIYYAGEPVR LKPGKAGAKK
Length:180
Mass (Da):19,532
Last modified:March 15, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1913833C0C30E95D
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti19 – 20VA → AV AA sequence (PubMed:11154066).Curated2
Sequence conflicti25K → L AA sequence (PubMed:11154066).Curated1
Sequence conflicti27K → Y AA sequence (PubMed:11154066).Curated1

<p>This subsection of the 'Sequence' section reports information derived from mass spectrometry experiments done on the entire protein or on biologically active derived peptide(s).<p><a href='/help/mass_spectrometry' target='_top'>More...</a></p>Mass spectrometryi

Molecular mass is 19401 Da. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD71500.1

Protein sequence database of the Protein Information Resource

More...PIRi		S15442

NCBI Reference Sequences

More...RefSeqi		WP_011173704.1, NC_006461.1
YP_144943.1, NC_006461.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		BAD71500; BAD71500; BAD71500

Database of genes from NCBI RefSeq genomes

More...GeneIDi		3169807

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ttj:TTHA1677

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD71500.1
PIRiS15442
RefSeqiWP_011173704.1, NC_006461.1
YP_144943.1, NC_006461.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VVJX-ray3.44RH/YH1-180[»]
1VY4X-ray2.60BH/DH1-180[»]
1VY5X-ray2.55BH/DH1-180[»]
1VY6X-ray2.90BH/DH1-180[»]
1VY7X-ray2.80BH/DH1-180[»]
4L47X-ray3.22RH/YH1-180[»]
4L71X-ray3.90RH/YH1-180[»]
4LELX-ray3.90RH/YH1-180[»]
4LFZX-ray3.92RH/YH1-180[»]
4LNTX-ray2.94RH/YH1-180[»]
4LSKX-ray3.48RH/YH1-180[»]
4LT8X-ray3.14RH/YH1-180[»]
4P6FX-ray3.60RH/YH1-180[»]
4P70X-ray3.68RH/YH1-180[»]
4TUAX-ray3.60RH/YH1-180[»]
4TUBX-ray3.60RH/YH1-180[»]
4TUCX-ray3.60RH/YH1-180[»]
4TUDX-ray3.60RH/YH1-180[»]
4TUEX-ray3.50RH/YH1-180[»]
4V42X-ray5.50BH26-177[»]
4V4PX-ray5.50H24-177[»]
4V4XX-ray5.00BH1-180[»]
4V4YX-ray5.50BH1-180[»]
4V4ZX-ray4.51BH1-180[»]
4V51X-ray2.80BH/DH2-180[»]
4V5AX-ray3.50BH/DH2-180[»]
4V5CX-ray3.30BH/DH1-180[»]
4V5DX-ray3.50BH/DH1-180[»]
4V5EX-ray3.45BH/DH1-180[»]
4V5FX-ray3.60BH/DH1-180[»]
4V5GX-ray3.60BH/DH1-180[»]
4V5JX-ray3.10BH/DH1-180[»]
4V5KX-ray3.20BH/DH1-180[»]
4V5LX-ray3.10BH1-180[»]
4V5Melectron microscopy7.80BH1-180[»]
4V5Nelectron microscopy7.60BH1-180[»]
4V5PX-ray3.10BH/DH1-180[»]
4V5QX-ray3.10BH/DH1-180[»]
4V5RX-ray3.10BH/DH1-180[»]
4V5SX-ray3.10BH/DH1-180[»]
4V68electron microscopy6.40BH12-171[»]
4V6AX-ray3.10BH/DH1-180[»]
4V6FX-ray3.10AH/DH1-180[»]
4V6GX-ray3.50BH/DH1-180[»]
4V7JX-ray3.30AH/BH1-180[»]
4V7KX-ray3.60AH/BH1-180[»]
4V7LX-ray3.00BH/DH1-180[»]
4V7MX-ray3.45BH/DH1-180[»]
4V7WX-ray3.00BH/DH1-180[»]
4V7XX-ray3.00BH/DH1-180[»]
4V7YX-ray3.00BH/DH1-180[»]
4V7ZX-ray3.10BH/DH1-180[»]
4V87X-ray3.10AH/DH2-171[»]
4V8AX-ray3.20AH/BH1-180[»]
4V8BX-ray3.00BH/DH1-180[»]
4V8CX-ray3.30AH/BH1-180[»]
4V8DX-ray3.00BH/DH1-180[»]
4V8EX-ray3.30AH/CH1-180[»]
4V8FX-ray3.30AH/DH1-180[»]
4V8GX-ray3.00BH/DH1-180[»]
4V8HX-ray3.10BH/DH1-180[»]
4V8IX-ray2.70BH/DH1-180[»]
4V8JX-ray3.90BH/DH1-180[»]
4V8NX-ray3.10BH/DH1-180[»]
4V8OX-ray3.80BH1-180[»]
4V8QX-ray3.10AH1-180[»]
4V8UX-ray3.70BH/DH1-180[»]
4V8XX-ray3.35BH/DH1-180[»]
4V90X-ray2.95BH1-180[»]
4V95X-ray3.20BH/DH1-180[»]
4V97X-ray3.52BH/DH1-180[»]
4V9AX-ray3.30BH/DH1-180[»]
4V9BX-ray3.10BH/DH1-180[»]
4V9HX-ray2.86BH1-180[»]
4V9IX-ray3.30BH/DH12-170[»]
4V9RX-ray3.00BH/DH1-180[»]
4V9SX-ray3.10BH/DH1-180[»]
4W2EX-ray2.90H1-180[»]
4W2FX-ray2.40BH/DH1-180[»]
4W2GX-ray2.55BH/DH1-180[»]
4W2HX-ray2.70BH/DH1-180[»]
4W2IX-ray2.70BH/DH1-180[»]
4W4GX-ray3.30RH/YH1-180[»]
4WPOX-ray2.80AH/CH1-180[»]
4WQ1X-ray3.1051/591-180[»]
4WQFX-ray2.80AH/CH1-180[»]
4WQRX-ray3.1551/591-180[»]
4WQUX-ray2.80AH/CH1-180[»]
4WQYX-ray2.80AH/CH1-180[»]
4WR6X-ray3.0551/591-180[»]
4WRAX-ray3.0551/591-180[»]
4WROX-ray3.05511-180[»]
4WSDX-ray2.9551/591-180[»]
4WSMX-ray3.3051/591-180[»]
4WT1X-ray3.0551/591-180[»]
4WT8X-ray3.40CF/DF12-170[»]
4WU1X-ray3.2051/591-180[»]
4WZDX-ray3.1051/591-180[»]
4WZOX-ray3.3051/591-180[»]
4Y4OX-ray2.301H/2H1-180[»]
4Y4PX-ray2.501H/2H1-180[»]
4YPBX-ray3.40RH/YH1-180[»]
4YZVX-ray3.10RH/YH1-180[»]
4Z3SX-ray2.651H/2H1-180[»]
4Z8CX-ray2.901H/2H1-180[»]
4ZERX-ray3.101H/2H2-175[»]
4ZSNX-ray3.60RH/YH1-180[»]
5A9Zelectron microscopy4.70AH4-177[»]
5AA0electron microscopy5.00AH4-177[»]
5CZPX-ray3.30RH/YH1-180[»]
5D8BX-ray3.63AB/E1-180[»]
5DFEX-ray3.10RH/YH1-180[»]
5DOXX-ray3.101H/2H1-180[»]
5DOYX-ray2.601H/2H1-180[»]
5E7KX-ray3.2051/591-180[»]
5E81X-ray2.9551/591-180[»]
5EL4X-ray3.1551/591-180[»]
5EL5X-ray3.1551/591-180[»]
5EL6X-ray3.1051/591-180[»]
5EL7X-ray3.1551/591-180[»]
5F8KX-ray2.801H/2H2-175[»]
5FDUX-ray2.901H/2H2-175[»]
5FDVX-ray2.801H/2H2-175[»]
5HAUX-ray3.001H/2H1-180[»]
5HCPX-ray2.891H/2H1-180[»]
5HCQX-ray2.801H/2H1-180[»]
5HCRX-ray2.801H/2H1-180[»]
5HD1X-ray2.701H/2H1-180[»]
5IB7X-ray2.9951/591-180[»]
5IB8X-ray3.1351/591-180[»]
5IBBX-ray2.9651/591-180[»]
5IMQelectron microscopy3.80e1-180[»]
5IMRelectron microscopy-e1-180[»]
5J30X-ray3.20RH/YH1-180[»]
5J3CX-ray3.04RH/YH1-180[»]
5J4BX-ray2.601H/2H1-180[»]
5J4CX-ray2.801H/2H1-180[»]
5J8BX-ray2.60H1-180[»]
5NDJX-ray3.1551/591-180[»]
5NDKX-ray2.9551/591-180[»]
5OT7electron microscopy3.80k1-176[»]
5UQ7electron microscopy3.50H3-175[»]
5UQ8electron microscopy3.20H3-175[»]
5VP2X-ray2.801H/2H1-180[»]
5VPOX-ray3.34RH/YH1-180[»]
5VPPX-ray3.90RH/YH1-180[»]
5W4KX-ray2.701H/2H1-180[»]
5WISX-ray2.701H/2H1-180[»]
5WITX-ray2.601H/2H1-180[»]
5ZLUelectron microscopy3.60d1-180[»]
6BUWX-ray3.50RH/YH1-180[»]
6BZ6X-ray3.18RH/YH1-180[»]
6BZ7X-ray3.68RH/YH1-180[»]
6BZ8X-ray3.74RH/YH1-180[»]
6C5LX-ray3.20BH/DH1-180[»]
6CAEX-ray2.601H/2H1-180[»]
6CFJX-ray2.801H/2H1-180[»]
6CFKX-ray2.701H/2H1-180[»]
6CFLX-ray2.601H/2H1-180[»]
6CZRX-ray3.141H/2H2-175[»]
6FKRX-ray3.201H/2H2-175[»]
6GSJX-ray2.9651/591-180[»]
6GSKX-ray3.3651/591-180[»]
6GSLX-ray3.1651/591-180[»]
6GZQelectron microscopy3.28G12-171[»]
6GZXelectron microscopy4.57G1/G22-171[»]
6GZZelectron microscopy4.13G1/G22-171[»]
6ND5X-ray2.601H/2H1-180[»]
6ND6X-ray2.851H/2H1-180[»]
6NDKX-ray3.64RH/YH1-180[»]
6NSHX-ray3.40RH/YH1-180[»]
6NTAX-ray3.10RH/YH1-180[»]
6NUOX-ray3.20RH/YH1-180[»]
6NWYX-ray3.50RH/YH1-180[»]
6O3MX-ray3.97RH/YH1-180[»]
6O97X-ray2.751H/2H1-180[»]
6OF1X-ray2.801H/2H1-180[»]
6OF6X-ray3.20RH/YH1-180[»]
6OJ2X-ray3.20RH/YH1-180[»]
6OPEX-ray3.10RH/YH1-180[»]
6ORDX-ray3.10RH/YH1-180[»]
6OSIX-ray4.14RH/YH1-180[»]
6OTRX-ray3.12RH/YH1-180[»]
6OXAX-ray3.25RH/YH1-180[»]
6OXIX-ray3.50RH/YH1-180[»]
6Q95electron microscopy3.70F12-171[»]
6QNQX-ray3.5051/591-180[»]
6QNRX-ray3.1051/591-180[»]
6UCQX-ray3.501H/2H1-180[»]
6UO1X-ray2.951H/2H1-180[»]
6XHVX-ray2.401H/2H1-180[»]
6XHWX-ray2.501H/2H1-180[»]
6XHXX-ray2.551H/2H1-180[»]
6XHYX-ray2.601H/2H1-180[»]
6XQDX-ray2.801H/2H1-180[»]
6XQEX-ray3.001H/2H1-180[»]
7JQLX-ray3.001H/2H1-180[»]
7JQMX-ray3.051H/2H1-180[»]
7LH5X-ray3.27BH/DH1-180[»]
7MD7X-ray2.801H/2H1-180[»]
7RQ8X-ray2.501H/2H1-180[»]
7RQ9X-ray2.601H/2H1-180[»]
7RQAX-ray2.401H/2H1-180[»]
7RQBX-ray2.451H/2H1-180[»]
7RQCX-ray2.501H/2H1-180[»]
7RQDX-ray2.501H/2H1-180[»]
7RQEX-ray2.401H/2H1-180[»]
AlphaFoldDBiP0DOY8
SMRiP0DOY8
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

IntActiP0DOY8, 6 interactors
STRINGi300852.55773059

Genome annotation databases

EnsemblBacteriaiBAD71500; BAD71500; BAD71500
GeneIDi3169807
KEGGittj:TTHA1677

Phylogenomic databases

eggNOGiCOG0097, Bacteria
HOGENOMiCLU_065464_1_2_0
OMAiKPDPYKG

Family and domain databases

Gene3Di3.90.930.12, 2 hits
HAMAPiMF_01365_B, Ribosomal_L6_B, 1 hit
InterProiView protein in InterPro
IPR000702, Ribosomal_L6
IPR020040, Ribosomal_L6_a/b-dom
IPR036789, Ribosomal_L6_a/b-dom_sf
IPR019906, Ribosomal_L6_bac-type
PANTHERiPTHR11655, PTHR11655, 1 hit
PTHR11655:SF14, PTHR11655:SF14, 1 hit
PfamiView protein in Pfam
PF00347, Ribosomal_L6, 2 hits
PIRSFiPIRSF002162, Ribosomal_L6, 1 hit
PRINTSiPR00059, RIBOSOMALL6
SUPFAMiSSF56053, SSF56053, 2 hits
TIGRFAMsiTIGR03654, L6_bact, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRL6_THET8
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P0DOY8
Secondary accession number(s): Q5SHQ3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2017
Last sequence update: March 15, 2017
Last modified: May 25, 2022
This is version 37 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
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