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Protein

Small integral membrane protein 10-like protein 2A

Gene

SMIM10L2A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Small integral membrane protein 10-like protein 2ACurated
Gene namesi
Name:SMIM10L2AImported
Synonyms:LINC00086Imported, NCRNA00086Imported
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000178947.8
HGNCiHGNC:34499 SMIM10L2A
neXtProtiNX_P0DMW4

Pathology & Biotechi

Organism-specific databases

DisGeNETi399668
OpenTargetsiENSG00000178947
ENSG00000196972

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004332321 – 78Small integral membrane protein 10-like protein 2AAdd BLAST78

Proteomic databases

PeptideAtlasiP0DMW4
PRIDEiP0DMW4

Expressioni

Gene expression databases

BgeeiENSG00000178947 Expressed in 131 organ(s), highest expression level in metanephros

Structurei

3D structure databases

ProteinModelPortaliP0DMW4
SMRiP0DMW4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiVASVMFN

Family and domain databases

InterProiView protein in InterPro
IPR029367 SMIM10
PANTHERiPTHR34446 PTHR34446, 1 hit
PfamiView protein in Pfam
PF15118 DUF4560, 1 hit

Sequencei

Sequence statusi: Complete.

P0DMW4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAASAALSAA AAAAALSGLA VRLSRSAAAR GSYGAFCKGL TRTLLTFFDL
60 70
AWRLRMNFPY FYIVASVMLN VRLQVRIE
Length:78
Mass (Da):8,389
Last modified:June 24, 2015 - v1
Checksum:i45160CC3A2FBB8C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL450472 Genomic DNA No translation available.
RefSeqiNP_001335184.1, NM_001348255.1
NP_976051.1, NM_203306.2
UniGeneiHs.374414
Hs.656427
Hs.720523

Genome annotation databases

EnsembliENST00000417443; ENSP00000488643; ENSG00000178947
GeneIDi399668
644596
KEGGihsa:399668
hsa:644596

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL450472 Genomic DNA No translation available.
RefSeqiNP_001335184.1, NM_001348255.1
NP_976051.1, NM_203306.2
UniGeneiHs.374414
Hs.656427
Hs.720523

3D structure databases

ProteinModelPortaliP0DMW4
SMRiP0DMW4
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiP0DMW4
PRIDEiP0DMW4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000417443; ENSP00000488643; ENSG00000178947
GeneIDi399668
644596
KEGGihsa:399668
hsa:644596

Organism-specific databases

CTDi399668
644596
DisGeNETi399668
EuPathDBiHostDB:ENSG00000178947.8
GeneCardsiSMIM10L2A
HGNCiHGNC:34499 SMIM10L2A
neXtProtiNX_P0DMW4
OpenTargetsiENSG00000178947
ENSG00000196972
GenAtlasiSearch...

Phylogenomic databases

OMAiVASVMFN

Miscellaneous databases

PROiPR:P0DMW4

Gene expression databases

BgeeiENSG00000178947 Expressed in 131 organ(s), highest expression level in metanephros

Family and domain databases

InterProiView protein in InterPro
IPR029367 SMIM10
PANTHERiPTHR34446 PTHR34446, 1 hit
PfamiView protein in Pfam
PF15118 DUF4560, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiSIL2A_HUMAN
AccessioniPrimary (citable) accession number: P0DMW4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 24, 2015
Last sequence update: June 24, 2015
Last modified: September 12, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
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Main funding by: National Institutes of Health

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