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Entry version 38 (16 Jan 2019)
Sequence version 1 (26 Jun 2013)
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Protein

Fer-1-like protein 5

Gene

Fer1l5

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Plays a role in myoblast fusion; probable mediator of endocytic recycling for membrane trafficking events during myotube formation.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Fer-1-like protein 5
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Fer1l5
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:3616091 Fer1l5

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei1961 – 1981HelicalSequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cell membrane, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi206 – 208NPF → SPL: Reduces interaction with EHD2. 1 Publication3
Mutagenesisi206N → C: Reduces interaction with EHD2. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004226471 – 2038Fer-1-like protein 5Add BLAST2038

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
P0DM40

PTM databases

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
P0DM40

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in differentiating myoblasts and myotubes.1 Publication

<p>This subsection of the ‘Expression’ section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

Up-regulated during myotube formation.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000037432 Expressed in 19 organ(s), highest expression level in testis

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
P0DM40 baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts (via second C2 domain) with EHD1 and EHD2.1 Publication

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 83C2 1PROSITE-ProRule annotationAdd BLAST83
Domaini154 – 292C2 2PROSITE-ProRule annotationAdd BLAST139
Domaini295 – 391C2 3PROSITE-ProRule annotationAdd BLAST97
Domaini1090 – 1195C2 4PROSITE-ProRule annotationAdd BLAST106
Domaini1500 – 1598C2 5PROSITE-ProRule annotationAdd BLAST99
Domaini1744 – 1872C2 6PROSITE-ProRule annotationAdd BLAST129

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ferlin family.Curated

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000161318

KEGG Orthology (KO)

More...
KOi
K22126

Identification of Orthologs from Complete Genome Data

More...
OMAi
FRRRCWH

Database of Orthologous Groups

More...
OrthoDBi
20162at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd04011 C2B_Ferlin, 1 hit
cd04017 C2D_Ferlin, 1 hit
cd04037 C2E_Ferlin, 1 hit
cd08374 C2F_Ferlin, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.150, 6 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000008 C2_dom
IPR035892 C2_domain_sf
IPR037720 C2B_Ferlin
IPR037723 C2D_Ferlin
IPR037724 C2E_Ferlin
IPR037725 C2F_Ferlin
IPR029997 Fer1L5
IPR012968 FerIin_dom
IPR037721 Ferlin
IPR012560 Ferlin_A-domain
IPR012561 Ferlin_B-domain
IPR032362 Ferlin_C
IPR006614 Peroxin/Ferlin

The PANTHER Classification System

More...
PANTHERi
PTHR12546 PTHR12546, 1 hit
PTHR12546:SF34 PTHR12546:SF34, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00168 C2, 7 hits
PF08165 FerA, 1 hit
PF08150 FerB, 1 hit
PF16165 Ferlin_C, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00239 C2, 6 hits
SM00694 DysFC, 2 hits
SM00693 DysFN, 2 hits
SM01200 FerA, 1 hit
SM01201 FerB, 1 hit
SM01202 FerI, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50004 C2, 4 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

P0DM40-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLRVVVESAS INPPLSTTPK AFVTVYFRDM MKRTRVEEGH DPIWNETLIW
60 70 80 90 100
HLWNQPLEND SFLKVILQDS VSKKKERFIG LATVPLKRLA QRPKEVMFVR
110 120 130 140 150
DLILLNHSMK PTNCTVTLHV AQIYDQDTEM TGNEELLGST VNEVTQKKLM
160 170 180 190 200
VSGLPMHRAL ASKPQHFQVR VKVFEARQLL GNNIKPVVKV NIADQQHLTR
210 220 230 240 250
IKMGNNPFFN EIFFQNFHEV PAKFFEENIS IEVVDSAASR SKAEIGRFQT
260 270 280 290 300
DIGFIYHSPG HTLLRKWLGL CQRNKTTSGV RGYLKVTICA LGVGDQALVD
310 320 330 340 350
QKLPYEQNTR VQIFKSKEVP VSLAYLQFFI YCAEDLHFGT HKSATPVLEV
360 370 380 390 400
ELIGDKLRTK PQNPSDNPIW NQILTFQIQL PCLSSYIKFR VMDCSKYKCQ
410 420 430 440 450
DEIGSASLCL SQISSTGEEI QGMYSGFLPC FGPSFLTLRG GKKPPFRTSE
460 470 480 490 500
EGTCIMDAVQ HGLAYRGRIF VEIVTKIKSQ QDSVMKDLSQ EVTQVEMQYY
510 520 530 540 550
RQKYGLCVIF LSCTMMPKFK DLIQFEVSMG HYGNKTDPNY KPLVSTTQYS
560 570 580 590 600
PVIYDGTTYH YVPWYNTKPV VAVTSNWEDV GFRMNCLNLL HITRDRLKTN
610 620 630 640 650
LDILKSIRNP RDPALLQQWE KLLKELQEDC RRPLPCMTDQ PRANSLDRNK
660 670 680 690 700
WQLRSQLLQQ LAQMAKEAKP VNMVGTAKEW LHRLNAVIPE PQESLPDVLI
710 720 730 740 750
WLMSRQQRVA YARVPAHTVL FSPAGPLSSG KFCGKIQNIL LQYPEGEGQD
760 770 780 790 800
TFPASLRVCM WLGNVKYSKN LKLLQQGSMV VYAETYENQA KTRDDWGQQG
810 820 830 840 850
LYHCPNFSDV MGRKALPKTD FKAPPGWHWK DDWVVEPQRR LLLDIDINKS
860 870 880 890 900
QVLEEVYENQ LRNATGAWVP AAIPNTDVNG QPVEALENVK CPQGWHFKKN
910 920 930 940 950
WIVKLNHAVD SEGWEYGVGI PPSGLPQIWN SVEKTYHSCR RRRWVRVRFR
960 970 980 990 1000
NHKELGQERS QEQETLSFLQ MQDLSEEGKE GWEYGTFDSR FHLDPQPTSR
1010 1020 1030 1040 1050
FRRRCWHRQL APNKDRGVAS IFLLEGSLAV EQKDQPRKEM EKTRSWQPWK
1060 1070 1080 1090 1100
DLRHTPEDPR IPTTPFIYYI LNKPHYYQLF CYIYQARNLM YNQILTFQEP
1110 1120 1130 1140 1150
FIQVVFLNHS LCTQTLRSSA APTWSQSIIF QHLLLFEDPK DTRENPPLVV
1160 1170 1180 1190 1200
LELWQHDSRG NKILWGRSMW PPVVWLGLQD WVFTPLRWHP LVRELGEEEG
1210 1220 1230 1240 1250
EILASCELIL ETQKLKELHP PILSIPCKDG IYLLPKNIQP TMKMMAIEIM
1260 1270 1280 1290 1300
AWGLRNMTKV RYPQLLLECG GESLKTEPIS NFQENPNFPT STFFFTVFMP
1310 1320 1330 1340 1350
LEETHAQPLV VKVVDNQEYG QQIVVGQANI DFLQPYFCDP WSLNYTTVKL
1360 1370 1380 1390 1400
PTLSVKKPDT FLDFVYKKFW FDSSKDEEVY EEEVDWWSKL FWATGDADKS
1410 1420 1430 1440 1450
LNYNHKSYHT LKVYDCELEA VLTFKGLQDF CQTFKLYQEK PKVDSPVVGE
1460 1470 1480 1490 1500
FKGLFRIYPF PEDPEAPKPP RQFSAWPEIE DFPQMCLVRV YLIRAINLQP
1510 1520 1530 1540 1550
QDYNGLCDPY VILKLGQTKL GSRDSYYPNT LDPIFGMMYE LTCNIPLEKD
1560 1570 1580 1590 1600
LEIQLFDFDL ITADDEIGST VIDLENRLLS GFGARCGLSK SYCKSGPFKW
1610 1620 1630 1640 1650
RDQMTPSYLL YRYAKQKGLP PPVFDLEGDS LYYNGETFKL QSFESAPPTY
1660 1670 1680 1690 1700
KHLGPKKERL ALYILNTQGL VPEHVETRTL HSNSQPGIDQ GKIQMWVDIF
1710 1720 1730 1740 1750
PKMLGPPGPQ VNISPRKPKR YQLRCIIWST AEVDLVQETF SKEKMSDIYV
1760 1770 1780 1790 1800
KGWLFGLEED TQKTDVHYHS LTGEATFNWR FIFTMDYLTT ERACVQSQKD
1810 1820 1830 1840 1850
YIWSLDPTST KFPARLMIQI WDNDFFSPDD FLGVLELDLS DMPLPAQNIK
1860 1870 1880 1890 1900
QCSLKMMETD SKWPFTPQKR ISLFKKTNVT GWWPCQVLDG DKWRLSGKVK
1910 1920 1930 1940 1950
MTLEMLSERE ALIRPAGRGQ SEPNQFPMLH PPERNDSFLL WYQSPIKNFC
1960 1970 1980 1990 2000
YAVCKRYRSK IICLVVTLVI GFILLNFVYS APSYFAMNWI KPQLRLSSPI
2010 2020 2030
KIVNLIGTVN TSNINSSILT MEGSTYHASH VFPEAPAP
Length:2,038
Mass (Da):235,837
Last modified:June 26, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFCD0D9EAC76C65E9
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0J9YV09A0A0J9YV09_MOUSE
Fer-1-like protein 5
Fer1l5
209Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0J9YTZ2A0A0J9YTZ2_MOUSE
Fer-1-like protein 5
Fer1l5
261Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti1025E → K in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1161N → K in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1310V → A in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1556F → S in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1582F → S in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1739T → A in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1803W → R in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1831F → I in AGE83049 (PubMed:21177873).Curated1
Sequence conflicti1975L → H in AGE83049 (PubMed:21177873).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KC440916 mRNA Translation: AGE83049.1
GL456084 Genomic DNA No translation available.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS78562.1

NCBI Reference Sequences

More...
RefSeqi
NP_001264005.1, NM_001277076.1

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.389112

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000179162; ENSMUSP00000142130; ENSMUSG00000037432

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
100534273

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:100534273

UCSC genome browser

More...
UCSCi
uc033fip.1 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KC440916 mRNA Translation: AGE83049.1
GL456084 Genomic DNA No translation available.
CCDSiCCDS78562.1
RefSeqiNP_001264005.1, NM_001277076.1
UniGeneiMm.389112

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

PTM databases

PhosphoSitePlusiP0DM40

Proteomic databases

PRIDEiP0DM40

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000179162; ENSMUSP00000142130; ENSMUSG00000037432
GeneIDi100534273
KEGGimmu:100534273
UCSCiuc033fip.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
90342
MGIiMGI:3616091 Fer1l5

Phylogenomic databases

GeneTreeiENSGT00940000161318
KOiK22126
OMAiFRRRCWH
OrthoDBi20162at2759

Miscellaneous databases

Protein Ontology

More...
PROi
PR:P0DM40

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000037432 Expressed in 19 organ(s), highest expression level in testis
ExpressionAtlasiP0DM40 baseline and differential

Family and domain databases

CDDicd04011 C2B_Ferlin, 1 hit
cd04017 C2D_Ferlin, 1 hit
cd04037 C2E_Ferlin, 1 hit
cd08374 C2F_Ferlin, 1 hit
Gene3Di2.60.40.150, 6 hits
InterProiView protein in InterPro
IPR000008 C2_dom
IPR035892 C2_domain_sf
IPR037720 C2B_Ferlin
IPR037723 C2D_Ferlin
IPR037724 C2E_Ferlin
IPR037725 C2F_Ferlin
IPR029997 Fer1L5
IPR012968 FerIin_dom
IPR037721 Ferlin
IPR012560 Ferlin_A-domain
IPR012561 Ferlin_B-domain
IPR032362 Ferlin_C
IPR006614 Peroxin/Ferlin
PANTHERiPTHR12546 PTHR12546, 1 hit
PTHR12546:SF34 PTHR12546:SF34, 1 hit
PfamiView protein in Pfam
PF00168 C2, 7 hits
PF08165 FerA, 1 hit
PF08150 FerB, 1 hit
PF16165 Ferlin_C, 1 hit
SMARTiView protein in SMART
SM00239 C2, 6 hits
SM00694 DysFC, 2 hits
SM00693 DysFN, 2 hits
SM01200 FerA, 1 hit
SM01201 FerB, 1 hit
SM01202 FerI, 1 hit
PROSITEiView protein in PROSITE
PS50004 C2, 4 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiFR1L5_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P0DM40
Secondary accession number(s): M1J7P7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 26, 2013
Last sequence update: June 26, 2013
Last modified: January 16, 2019
This is version 38 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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