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Protein

Putative ribose 5-phosphate isomerase

Gene

CIMG_07932

Organism
Coccidioides immitis (strain RS) (Valley fever fungus)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei76Proton acceptorCombined sources1 Publication1
Binding sitei110D-ribulose 5-phosphateBy similarity1
Binding sitei120D-ribulose 5-phosphateBy similarity1
Binding sitei148D-ribulose 5-phosphateBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase

Enzyme and pathway databases

BRENDAi5.3.1.6 1544

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ribose 5-phosphate isomerase (EC:5.3.1.-)
Gene namesi
ORF Names:CIMG_07932
OrganismiCoccidioides immitis (strain RS) (Valley fever fungus)
Taxonomic identifieri246410 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeOnygenalesOnygenales incertae sedisCoccidioides
Proteomesi
  • UP000001261 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:CIMG_07932

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004055651 – 163Putative ribose 5-phosphate isomeraseAdd BLAST163

Interactioni

Subunit structurei

Homodimer or homotetramer.1 Publication

Protein-protein interaction databases

STRINGi246410.XP_001240769.1

Structurei

Secondary structure

1163
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP0CL19
SMRiP0CL19
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0CL19

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni16 – 17D-ribulose 5-phosphate bindingCombined sources1 Publication2
Regioni77 – 81D-ribulose 5-phosphate bindingCombined sources1 Publication5

Sequence similaritiesi

Belongs to the LacAB/RpiB family.Curated

Phylogenomic databases

eggNOGiENOG410IXNF Eukaryota
COG0698 LUCA
InParanoidiP0CL19
KOiK01808
OrthoDBiEOG092C5ZNG

Family and domain databases

Gene3Di3.40.1400.10, 1 hit
InterProiView protein in InterPro
IPR011860 Rib-5-P_Isoase
IPR003500 RpiB_LacA_LacB
IPR036569 RpiB_LacA_LacB_sf
PfamiView protein in Pfam
PF02502 LacAB_rpiB, 1 hit
PIRSFiPIRSF005384 RpiB_LacA_B, 1 hit
SUPFAMiSSF89623 SSF89623, 1 hit
TIGRFAMsiTIGR02133 RPI_actino, 1 hit
TIGR00689 rpiB_lacA_lacB, 1 hit

Sequencei

Sequence statusi: Complete.

P0CL19-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAATPLPPLR LAIACDDAGV SYKEALKAHL SDNPLVSSIT DVGVTSTTDK
60 70 80 90 100
TAYPHVAIQA AQLIKDGKVD RALMICGTGL GVAISANKVP GIRAVTAHDT
110 120 130 140 150
FSVERAILSN DAQVLCFGQR VIGIELAKRL AGEWLTYRFD QKSASAQKVQ
160
AISDYEKKFV EVN
Length:163
Mass (Da):17,399
Last modified:March 8, 2011 - v1
Checksum:iD1FC32D7DE695D1B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG704913 Genomic DNA Translation: EAS29186.1
RefSeqiXP_001240769.1, XM_001240768.1

Genome annotation databases

EnsemblFungiiEAS29186; EAS29186; CIMG_07932
GeneIDi4559626
KEGGicim:CIMG_07932

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG704913 Genomic DNA Translation: EAS29186.1
RefSeqiXP_001240769.1, XM_001240768.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3QD5X-ray1.90A/B1-163[»]
3SDWX-ray1.80A1-163[»]
3SGWX-ray1.70A1-163[»]
ProteinModelPortaliP0CL19
SMRiP0CL19
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246410.XP_001240769.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiEAS29186; EAS29186; CIMG_07932
GeneIDi4559626
KEGGicim:CIMG_07932

Organism-specific databases

EuPathDBiFungiDB:CIMG_07932

Phylogenomic databases

eggNOGiENOG410IXNF Eukaryota
COG0698 LUCA
InParanoidiP0CL19
KOiK01808
OrthoDBiEOG092C5ZNG

Enzyme and pathway databases

BRENDAi5.3.1.6 1544

Miscellaneous databases

EvolutionaryTraceiP0CL19

Family and domain databases

Gene3Di3.40.1400.10, 1 hit
InterProiView protein in InterPro
IPR011860 Rib-5-P_Isoase
IPR003500 RpiB_LacA_LacB
IPR036569 RpiB_LacA_LacB_sf
PfamiView protein in Pfam
PF02502 LacAB_rpiB, 1 hit
PIRSFiPIRSF005384 RpiB_LacA_B, 1 hit
SUPFAMiSSF89623 SSF89623, 1 hit
TIGRFAMsiTIGR02133 RPI_actino, 1 hit
TIGR00689 rpiB_lacA_lacB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRPIB_COCIM
AccessioniPrimary (citable) accession number: P0CL19
Secondary accession number(s): A0A0E1RWN9, J3K544
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 25, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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Main funding by: National Institutes of Health

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