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Entry version 57 (07 Apr 2021)
Sequence version 1 (11 Jan 2011)
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Protein

Dyslexia-associated protein KIAA0319 homolog

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in neuronal migration during development of the cerebral neocortex. May function in a cell autonomous and a non-cell autonomous manner and play a role in appropriate adhesion between migrating neurons and radial glial fibers. May also regulate growth and differentiation of dendrites.2 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDevelopmental protein
Biological processNeurogenesis

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-RNO-8856825, Cargo recognition for clathrin-mediated endocytosis
R-RNO-8856828, Clathrin-mediated endocytosis

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Dyslexia-associated protein KIAA0319 homolog
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 17

Organism-specific databases

Rat genome database

More...
RGDi
1307443, RGD1307443

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini23 – 964ExtracellularSequence analysisAdd BLAST942
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei965 – 985HelicalSequence analysisAdd BLAST21
Topological domaini986 – 1081CytoplasmicSequence analysisAdd BLAST96

Keywords - Cellular componenti

Cell membrane, Endosome, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 22Sequence analysisAdd BLAST22
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000040347923 – 1081Dyslexia-associated protein KIAA0319 homologAdd BLAST1059

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi430N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi522N-linked (GlcNAc...) asparagineSequence analysis1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

N-glycosylated.By similarity
O-glycosylated.By similarity
Shedding of the extracellular domain and intramembrane cleavage produce several proteolytic products. The intramembrane cleavage releases a soluble cytoplasmic polypeptide that translocates to the nucleolus (By similarity).By similarity

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
P0CI71

PRoteomics IDEntifications database

More...
PRIDEi
P0CI71

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...
GlyGeni
P0CI71, 2 sites

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Highly expressed during development in ventricular zone, intermediate zone, cortical plate, striatum, hippocampus, and brain stem.

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSRNOG00000018141, Expressed in brain and 11 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
P0CI71, RN

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer.

Interacts with AP2M1; required for clathrin-mediated endocytosis (By similarity).

By similarity

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10116.ENSRNOP00000024536

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
P0CI71

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini23 – 99MANSCPROSITE-ProRule annotationAdd BLAST77
Domaini345 – 436PKD 1Add BLAST92
Domaini444 – 533PKD 2Add BLAST90
Domaini539 – 629PKD 3Add BLAST91
Domaini630 – 723PKD 4Add BLAST94
Domaini729 – 820PKD 5Add BLAST92

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi1004 – 1007Endocytosis signal4

Keywords - Domaini

Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502QR8M, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000161462

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_009448_0_1_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P0CI71

Identification of Orthologs from Complete Genome Data

More...
OMAi
WSVFYVT

Database of Orthologous Groups

More...
OrthoDBi
476157at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
P0CI71

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 5 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR013783, Ig-like_fold
IPR029865, KIAA0319-like
IPR013980, MANSC_dom
IPR011106, MANSC_N
IPR022409, PKD/Chitinase_dom
IPR035986, PKD_dom_sf

The PANTHER Classification System

More...
PANTHERi
PTHR46182, PTHR46182, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00765, MANEC, 1 hit
SM00089, PKD, 5 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49299, SSF49299, 4 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50986, MANSC, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P0CI71-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVSPPGVLSS LLLLAAMAGG SSQQCSEGRT YSDAIISPNL ESIRIMRVSH
60 70 80 90 100
TFSVGDCTAA CCDLPSCDLA WWFEGSCYLV NCMRPENCEP RTTGPIRSYL
110 120 130 140 150
TFVRRPVQRS GQLLDYGDMM LGRGSPSGAW GDSLEDLRKD LPFLGKDGGP
160 170 180 190 200
EETAEYSDDY KELERGLLQP SNQQDPRGSA EYPDWSLLPS SDGDFNASAT
210 220 230 240 250
GDNSAASTEK LQDLTPYPLD QEQLQSLNES TWSPTPRHSE MSSMWPSSVT
260 270 280 290 300
ASPTEEGLEG EETLQLQEQP NNSSGKKVPM PSHNPSPASL ESSPTTVEKS
310 320 330 340 350
SIFTVTPWSR DPGTPTFPAS TVLPGLISPS WPLSPTTSRT VKALAVSAGD
360 370 380 390 400
NLVLTLPNGE AELKASVEPA PPADTAYTYE WSLMSHPVDF QGKIKQENKP
410 420 430 440 450
TLHLSQLSVG LYAFRVAVSG ENAFGEGYVN VTVMPAARIN QPPVAIVSPQ
460 470 480 490 500
IQELSLPLTS ALIDGSQSTD DAEIVSYHWE EVDGPFLGEA FLDDSPLLRL
510 520 530 540 550
SNLDPGNYTF RLTITDSDGA TNSTTAALII RGSLDYPPVA NAGPNQTITL
560 570 580 590 600
PQNTIILNGN QSSDDHQIVL YEWFPDPGGE SKEMVMQGAQ TPYLHLSELQ
610 620 630 640 650
EGEYTFQLMV TDSSGQQSTA LVTLTVQAEN NQAPVAVAGP DKELVFPVQS
660 670 680 690 700
AMLDGSRSSD DHGIVCYRWE HIRGPSAVEM ENVDKAIATV TGLQVGTYHF
710 720 730 740 750
RLTVRDQQGL SSTSTLTVAV KKENNSPPRA QAGGRHVLML PNNSITLDGS
760 770 780 790 800
RSTDDRGIVS YLWIRDGQSP AAGDIIGSSD NGAALQLTNL VEGVYTFHLL
810 820 830 840 850
VTDSQGASDS DTAIVEVLPD PKKDGMVELI LQVGVEQLTE QQKETLVRQL
860 870 880 890 900
AVLLNVLDSD VKVLKIQAHT DVSTVIVFYV QSGSPFKVLR AADVARNLHK
910 920 930 940 950
RLSKEKGAFL LFKVLRIDTA GCLLKCSGHG HCDPITKRCI CSQLWMENLL
960 970 980 990 1000
QRYMWDGESN CEWSVFYVAA LALTLTVLTG AVTWVCICCC RRRKRTKIRK
1010 1020 1030 1040 1050
KTKYTILDNM DEQERMELRP KYGIKHRSTE HNSSLMVSES EFESDQDTLF
1060 1070 1080
SQERMERGVL KGSLNGSARS GVSFGYYSKD R
Length:1,081
Mass (Da):118,013
Last modified:January 11, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i799EC97AC8303F79
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AABR03104707 Genomic DNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
NP_001183952.1, NM_001197023.1
XP_017456093.1, XM_017600604.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000024536; ENSRNOP00000024536; ENSRNOG00000018141

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
361244

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
rno:361244

UCSC genome browser

More...
UCSCi
RGD:1307443, rat

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR03104707 Genomic DNA No translation available.
RefSeqiNP_001183952.1, NM_001197023.1
XP_017456093.1, XM_017600604.1

3D structure databases

SMRiP0CI71
ModBaseiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024536

PTM databases

GlyGeniP0CI71, 2 sites

Proteomic databases

PaxDbiP0CI71
PRIDEiP0CI71

Genome annotation databases

EnsembliENSRNOT00000024536; ENSRNOP00000024536; ENSRNOG00000018141
GeneIDi361244
KEGGirno:361244
UCSCiRGD:1307443, rat

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
361244
RGDi1307443, RGD1307443

Phylogenomic databases

eggNOGiENOG502QR8M, Eukaryota
GeneTreeiENSGT00940000161462
HOGENOMiCLU_009448_0_1_1
InParanoidiP0CI71
OMAiWSVFYVT
OrthoDBi476157at2759
PhylomeDBiP0CI71

Enzyme and pathway databases

ReactomeiR-RNO-8856825, Cargo recognition for clathrin-mediated endocytosis
R-RNO-8856828, Clathrin-mediated endocytosis

Miscellaneous databases

Protein Ontology

More...
PROi
PR:P0CI71

Gene expression databases

BgeeiENSRNOG00000018141, Expressed in brain and 11 other tissues
GenevisibleiP0CI71, RN

Family and domain databases

Gene3Di2.60.40.10, 5 hits
InterProiView protein in InterPro
IPR013783, Ig-like_fold
IPR029865, KIAA0319-like
IPR013980, MANSC_dom
IPR011106, MANSC_N
IPR022409, PKD/Chitinase_dom
IPR035986, PKD_dom_sf
PANTHERiPTHR46182, PTHR46182, 1 hit
SMARTiView protein in SMART
SM00765, MANEC, 1 hit
SM00089, PKD, 5 hits
SUPFAMiSSF49299, SSF49299, 4 hits
PROSITEiView protein in PROSITE
PS50986, MANSC, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiK0319_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P0CI71
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 11, 2011
Last sequence update: January 11, 2011
Last modified: April 7, 2021
This is version 57 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome
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