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UniProtKB - P0C2W7 (CT47B_HUMAN)
Protein
Cancer/testis antigen 47B
Gene
CT47B1
Organism
Homo sapiens (Human)
Status
Names & Taxonomyi
Protein namesi | Recommended name: Cancer/testis antigen 47BAlternative name(s): Cancer/testis antigen 47.13 Short name: CT47.13 |
Gene namesi | Name:CT47B1 Synonyms:CT47.13 |
Organismi | Homo sapiens (Human) |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
HGNCi | HGNC:33293, CT47B1 |
MIMi | 300790, gene |
neXtProti | NX_P0C2W7 |
VEuPathDBi | HostDB:ENSG00000236446 |
Pathology & Biotechi
Organism-specific databases
OpenTargetsi | ENSG00000236446 |
PharmGKBi | PA164718327 |
Miscellaneous databases
Pharosi | P0C2W7, Tdark |
Genetic variation databases
BioMutai | CT47B1 |
DMDMi | 146286097 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000286433 | 1 – 299 | Cancer/testis antigen 47BAdd BLAST | 299 |
Proteomic databases
MassIVEi | P0C2W7 |
PaxDbi | P0C2W7 |
PeptideAtlasi | P0C2W7 |
PRIDEi | P0C2W7 |
ProteomicsDBi | 52306 |
Expressioni
Gene expression databases
Bgeei | ENSG00000236446, Expressed in testis and 6 other tissues |
Genevisiblei | P0C2W7, HS |
Organism-specific databases
HPAi | ENSG00000236446, Tissue enriched (testis) |
Interactioni
Protein-protein interaction databases
STRINGi | 9606.ENSP00000360360 |
Miscellaneous databases
RNActi | P0C2W7, protein |
Structurei
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 102 | DisorderedSequence analysisAdd BLAST | 102 | |
Regioni | 215 – 299 | DisorderedSequence analysisAdd BLAST | 85 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 270 – 298 | Sequence analysisAdd BLAST | 29 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 18 | Polar residuesSequence analysisAdd BLAST | 18 | |
Compositional biasi | 86 – 102 | Acidic residuesSequence analysisAdd BLAST | 17 | |
Compositional biasi | 215 – 234 | Basic and acidic residuesSequence analysisAdd BLAST | 20 | |
Compositional biasi | 235 – 254 | Acidic residuesSequence analysisAdd BLAST | 20 | |
Compositional biasi | 278 – 299 | Basic and acidic residuesSequence analysisAdd BLAST | 22 |
Keywords - Domaini
Coiled coilPhylogenomic databases
eggNOGi | ENOG502TF73, Eukaryota |
GeneTreei | ENSGT00390000002253 |
HOGENOMi | CLU_083200_0_0_1 |
InParanoidi | P0C2W7 |
OMAi | FLYLVHS |
OrthoDBi | 1561192at2759 |
PhylomeDBi | P0C2W7 |
TreeFami | TF342556 |
Family and domain databases
InterProi | View protein in InterPro IPR028930, CT47 |
PANTHERi | PTHR32157, PTHR32157, 1 hit |
Pfami | View protein in Pfam PF15623, CT47, 1 hit |
i Sequence
Sequence statusi: Complete.
P0C2W7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSATGDRHPT QGDQEAPVSQ EGAQAEAAGA GNQEGGDSGP DSSDMVPAAE
60 70 80 90 100
VVGVAGPVEG LGEEEGEQAA GLAAVPQGGS AEEDSDIGPA TEEEEEEEEG
110 120 130 140 150
NEAANFDLAV ATRRYPAAGI GFVFLYLVHS LLRRLYHNDH IQIANRHLSR
160 170 180 190 200
LMVGPHAAVP NLWDNPPLLL LSQRLGAGAA APEGEGLGLI QEAASVQEAA
210 220 230 240 250
SVPEPAVPAD LAEMAREPAE EAADEKPPEE AAEEKLTEEA TEEPAAEEPT
260 270 280 290
SEEAVAPEEV TKSQPEKWDE EAQDAAGEEE KEQEKEKDVE NKVKNSKGT
Natural variant
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural variantiVAR_076267 | 99 | Missing 1 Publication | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC008162 Genomic DNA No translation available. |
CCDSi | CCDS48161.1 |
RefSeqi | NP_001139190.1, NM_001145718.1 |
Genome annotation databases
Ensembli | ENST00000371311; ENSP00000360360; ENSG00000236446 ENST00000672355; ENSP00000500741; ENSG00000288466 |
GeneIDi | 643311 |
KEGGi | hsa:643311 |
MANE-Selecti | ENST00000371311.5; ENSP00000360360.3; NM_001145718.3; NP_001139190.1 |
UCSCi | uc011muc.3, human |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC008162 Genomic DNA No translation available. |
CCDSi | CCDS48161.1 |
RefSeqi | NP_001139190.1, NM_001145718.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 9606.ENSP00000360360 |
Genetic variation databases
BioMutai | CT47B1 |
DMDMi | 146286097 |
Proteomic databases
MassIVEi | P0C2W7 |
PaxDbi | P0C2W7 |
PeptideAtlasi | P0C2W7 |
PRIDEi | P0C2W7 |
ProteomicsDBi | 52306 |
Protocols and materials databases
Antibodypediai | 70794, 17 antibodies from 8 providers |
DNASUi | 643311 |
Genome annotation databases
Ensembli | ENST00000371311; ENSP00000360360; ENSG00000236446 ENST00000672355; ENSP00000500741; ENSG00000288466 |
GeneIDi | 643311 |
KEGGi | hsa:643311 |
MANE-Selecti | ENST00000371311.5; ENSP00000360360.3; NM_001145718.3; NP_001139190.1 |
UCSCi | uc011muc.3, human |
Organism-specific databases
CTDi | 643311 |
GeneCardsi | CT47B1 |
HGNCi | HGNC:33293, CT47B1 |
HPAi | ENSG00000236446, Tissue enriched (testis) |
MIMi | 300790, gene |
neXtProti | NX_P0C2W7 |
OpenTargetsi | ENSG00000236446 |
PharmGKBi | PA164718327 |
VEuPathDBi | HostDB:ENSG00000236446 |
GenAtlasi | Search... |
Phylogenomic databases
eggNOGi | ENOG502TF73, Eukaryota |
GeneTreei | ENSGT00390000002253 |
HOGENOMi | CLU_083200_0_0_1 |
InParanoidi | P0C2W7 |
OMAi | FLYLVHS |
OrthoDBi | 1561192at2759 |
PhylomeDBi | P0C2W7 |
TreeFami | TF342556 |
Enzyme and pathway databases
PathwayCommonsi | P0C2W7 |
Miscellaneous databases
BioGRID-ORCSi | 643311, 5 hits in 647 CRISPR screens |
GenomeRNAii | 643311 |
Pharosi | P0C2W7, Tdark |
PROi | PR:P0C2W7 |
RNActi | P0C2W7, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSG00000236446, Expressed in testis and 6 other tissues |
Genevisiblei | P0C2W7, HS |
Family and domain databases
InterProi | View protein in InterPro IPR028930, CT47 |
PANTHERi | PTHR32157, PTHR32157, 1 hit |
Pfami | View protein in Pfam PF15623, CT47, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | CT47B_HUMAN | |
Accessioni | P0C2W7Primary (citable) accession number: P0C2W7 Secondary accession number(s): A6NM97 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 1, 2007 |
Last sequence update: | May 1, 2007 | |
Last modified: | February 23, 2022 | |
This is version 87 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Human chromosome X
Human chromosome X: entries, gene names and cross-references to MIM - Human entries with genetic variants
List of human entries with genetic variants - MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot