UniProtKB - P0AFP0 (YADS_ECOLI)
Protein
UPF0126 inner membrane protein YadS
Gene
yadS
Organism
Escherichia coli (strain K12)
Status
Names & Taxonomyi
Protein namesi | Recommended name: UPF0126 inner membrane protein YadS |
Gene namesi | Name:yadS Ordered Locus Names:b0157, JW0153 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 1 – 21 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 22 – 29 | CytoplasmicSequence analysis | 8 | |
Transmembranei | 30 – 50 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 51 – 58 | PeriplasmicSequence analysis | 8 | |
Transmembranei | 59 – 79 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 80 – 85 | CytoplasmicSequence analysis | 6 | |
Transmembranei | 86 – 106 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 107 – 112 | PeriplasmicSequence analysis | 6 | |
Transmembranei | 113 – 133 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 134 – 148 | CytoplasmicSequence analysisAdd BLAST | 15 | |
Transmembranei | 149 – 169 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 170 | PeriplasmicSequence analysis | 1 | |
Transmembranei | 171 – 191 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 192 – 207 | CytoplasmicSequence analysisAdd BLAST | 16 |
GO - Cellular componenti
- integral component of membrane Source: UniProtKB-KW
- plasma membrane Source: EcoCyc
Keywords - Cellular componenti
Cell inner membrane, Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000166297 | 1 – 207 | UPF0126 inner membrane protein YadSAdd BLAST | 207 |
Proteomic databases
jPOSTi | P0AFP0 |
PaxDbi | P0AFP0 |
PRIDEi | P0AFP0 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4261385, 28 interactors |
IntActi | P0AFP0, 1 interactor |
STRINGi | 511145.b0157 |
Family & Domainsi
Sequence similaritiesi
Belongs to the UPF0126 family.Curated
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | COG2860, Bacteria |
HOGENOMi | CLU_064906_2_1_6 |
InParanoidi | P0AFP0 |
PhylomeDBi | P0AFP0 |
Family and domain databases
InterProi | View protein in InterPro IPR005115, UPF0126 |
Pfami | View protein in Pfam PF03458, UPF0126, 2 hits |
i Sequence
Sequence statusi: Complete.
P0AFP0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLVYWLDIVG TAVFAISGVL LAGKLRMDPF GVLVLGVVTA VGGGTIRDMA
60 70 80 90 100
LDHGPVFWVK DPTDLVVAMV TSMLTIVLVR QPRRLPKWML PVLDAVGLAV
110 120 130 140 150
FVGIGVNKAF NAEAGPLIAV CMGVITGVGG GIIRDVLARE IPMILRTEIY
160 170 180 190 200
ATACIIGGIV HATAYYTFSV PLETASMMGM VVTLLIRLAA IRWHLKLPTF
ALDENGR
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U70214 Genomic DNA Translation: AAB08587.1 U00096 Genomic DNA Translation: AAC73268.1 AP009048 Genomic DNA Translation: BAB96734.1 |
PIRi | S45226 |
RefSeqi | NP_414699.1, NC_000913.3 WP_000964221.1, NZ_STEB01000032.1 |
Genome annotation databases
EnsemblBacteriai | AAC73268; AAC73268; b0157 BAB96734; BAB96734; BAB96734 |
GeneIDi | 57731419 949062 |
KEGGi | ecj:JW0153 eco:b0157 |
PATRICi | fig|1411691.4.peg.2123 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U70214 Genomic DNA Translation: AAB08587.1 U00096 Genomic DNA Translation: AAC73268.1 AP009048 Genomic DNA Translation: BAB96734.1 |
PIRi | S45226 |
RefSeqi | NP_414699.1, NC_000913.3 WP_000964221.1, NZ_STEB01000032.1 |
3D structure databases
SMRi | P0AFP0 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4261385, 28 interactors |
IntActi | P0AFP0, 1 interactor |
STRINGi | 511145.b0157 |
Proteomic databases
jPOSTi | P0AFP0 |
PaxDbi | P0AFP0 |
PRIDEi | P0AFP0 |
Genome annotation databases
EnsemblBacteriai | AAC73268; AAC73268; b0157 BAB96734; BAB96734; BAB96734 |
GeneIDi | 57731419 949062 |
KEGGi | ecj:JW0153 eco:b0157 |
PATRICi | fig|1411691.4.peg.2123 |
Organism-specific databases
EchoBASEi | EB2237 |
Phylogenomic databases
eggNOGi | COG2860, Bacteria |
HOGENOMi | CLU_064906_2_1_6 |
InParanoidi | P0AFP0 |
PhylomeDBi | P0AFP0 |
Enzyme and pathway databases
BioCyci | EcoCyc:EG12333-MONOMER |
Miscellaneous databases
PROi | PR:P0AFP0 |
Family and domain databases
InterProi | View protein in InterPro IPR005115, UPF0126 |
Pfami | View protein in Pfam PF03458, UPF0126, 2 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YADS_ECOLI | |
Accessioni | P0AFP0Primary (citable) accession number: P0AFP0 Secondary accession number(s): P37027 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | December 20, 2005 |
Last sequence update: | December 20, 2005 | |
Last modified: | February 10, 2021 | |
This is version 96 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families - Uncharacterized protein families (UPF)
List of uncharacterized protein family (UPF) entries