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Protein

Uncharacterized protein YjbR

Gene

yjbR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11936-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjbR
Gene namesi
Name:yjbR
Ordered Locus Names:b4057, JW4018
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11936 yjbR

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001697151 – 118Uncharacterized protein YjbRAdd BLAST118

Proteomic databases

PaxDbiP0AF50
PRIDEiP0AF50

Interactioni

Protein-protein interaction databases

BioGridi4262669, 10 interactors
IntActiP0AF50, 1 interactor
STRINGi316385.ECDH10B_4246

Structurei

Secondary structure

1118
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 10Combined sources8
Beta strandi17 – 21Combined sources5
Turni22 – 25Combined sources4
Beta strandi26 – 33Combined sources8
Beta strandi35 – 39Combined sources5
Beta strandi47 – 52Combined sources6
Helixi54 – 62Combined sources9
Turni75 – 77Combined sources3
Beta strandi78 – 82Combined sources5
Turni84 – 86Combined sources3
Helixi89 – 105Combined sources17
Helixi109 – 117Combined sources9

3D structure databases

ProteinModelPortaliP0AF50
SMRiP0AF50
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0AF50

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105MSB Bacteria
COG2315 LUCA
HOGENOMiHOG000013133
InParanoidiP0AF50
OMAiKVFAWIF
PhylomeDBiP0AF50

Family and domain databases

Gene3Di3.90.1150.30, 1 hit
InterProiView protein in InterPro
IPR007351 YjbR
IPR038056 YjbR-like_sf
PANTHERiPTHR35145 PTHR35145, 1 hit
PfamiView protein in Pfam
PF04237 YjbR, 1 hit
SUPFAMiSSF142906 SSF142906, 1 hit

Sequencei

Sequence statusi: Complete.

P0AF50-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTISELLQYC MAKPGAEQSV HNDWKATQIK VEDVLFAMVK EVENRPAVSL
60 70 80 90 100
KTSPELAELL RQQHSDVRPS RHLNKAHWST VYLDGSLPDS QIYYLVDASY
110
QQAVNLLPEE KRKLLVQL
Length:118
Mass (Da):13,519
Last modified:December 20, 2005 - v1
Checksum:iEE62FB333CED568B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti10C → S AA sequence (PubMed:9868784).Curated1
Sequence conflicti68R → G in AAC43151 (PubMed:8265357).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA Translation: AAC43151.1
U00096 Genomic DNA Translation: AAC77027.1
AP009048 Genomic DNA Translation: BAE78059.1
PIRiH65213
RefSeqiNP_418481.1, NC_000913.3
WP_000155657.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC77027; AAC77027; b4057
BAE78059; BAE78059; BAE78059
GeneIDi948560
KEGGiecj:JW4018
eco:b4057
PATRICifig|511145.12.peg.4178

Similar proteinsi

Entry informationi

Entry nameiYJBR_ECOLI
AccessioniPrimary (citable) accession number: P0AF50
Secondary accession number(s): P32699, Q2M6P7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: July 18, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

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