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Protein

Uncharacterized protein YbaA

Gene

ybaA

Organism
Shigella flexneri
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbaA
Gene namesi
Name:ybaA
Ordered Locus Names:SF0401, S0408
OrganismiShigella flexneri
Taxonomic identifieri623 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeShigella
Proteomesi
  • UP000002673 Componenti: Chromosome
  • UP000001006 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686151 – 117Uncharacterized protein YbaAAdd BLAST117

Structurei

Secondary structure

1117
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP0AAQ9
SMRiP0AAQ9
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0AAQ9

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105KCV Bacteria
COG5507 LUCA
HOGENOMiHOG000117599
OMAiRLIYGGF

Family and domain databases

InterProiView protein in InterPro
IPR011008 Dimeric_a/b-barrel
IPR009874 DUF1428
PfamiView protein in Pfam
PF07237 DUF1428, 1 hit
PIRSFiPIRSF007028 UCP007028, 1 hit
SUPFAMiSSF54909 SSF54909, 1 hit

Sequencei

Sequence statusi: Complete.

P0AAQ9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKYVDGFVVA VPADKKDAYR EMAAKAAPLF KEFGALRIVE CWASDVPDGK
60 70 80 90 100
VTDFRMAVKA EENEEVVFSW IEYPSKEVRD AANQKMMSDP RMKEFGESMP
110
FDGKRMIYGG FESIIDE
Length:117
Mass (Da):13,318
Last modified:October 11, 2005 - v1
Checksum:i5E320D62A2A93FF9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005674 Genomic DNA Translation: AAN42057.1
AE014073 Genomic DNA Translation: AAP15934.1
RefSeqiNP_706350.1, NC_004337.2
WP_000878140.1, NZ_QDEA01000064.1

Genome annotation databases

EnsemblBacteriaiAAN42057; AAN42057; SF0401
AAP15934; AAP15934; S0408
GeneIDi1027736
KEGGisfl:SF0401
sfx:S0408
PATRICifig|198214.7.peg.460

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005674 Genomic DNA Translation: AAN42057.1
AE014073 Genomic DNA Translation: AAP15934.1
RefSeqiNP_706350.1, NC_004337.2
WP_000878140.1, NZ_QDEA01000064.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2OKQX-ray1.80A/B1-117[»]
ProteinModelPortaliP0AAQ9
SMRiP0AAQ9
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN42057; AAN42057; SF0401
AAP15934; AAP15934; S0408
GeneIDi1027736
KEGGisfl:SF0401
sfx:S0408
PATRICifig|198214.7.peg.460

Phylogenomic databases

eggNOGiENOG4105KCV Bacteria
COG5507 LUCA
HOGENOMiHOG000117599
OMAiRLIYGGF

Miscellaneous databases

EvolutionaryTraceiP0AAQ9

Family and domain databases

InterProiView protein in InterPro
IPR011008 Dimeric_a/b-barrel
IPR009874 DUF1428
PfamiView protein in Pfam
PF07237 DUF1428, 1 hit
PIRSFiPIRSF007028 UCP007028, 1 hit
SUPFAMiSSF54909 SSF54909, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiYBAA_SHIFL
AccessioniPrimary (citable) accession number: P0AAQ9
Secondary accession number(s): P09161
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 10, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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