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Protein

Putative HNH nuclease YajD

Gene

yajD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase, Nuclease

Enzyme and pathway databases

BioCyciEcoCyc:EG11097-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative HNH nuclease YajD (EC:3.1.-.-)
Gene namesi
Name:yajD
Ordered Locus Names:b0410, JW0400
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11097 yajD

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686061 – 115Putative HNH nuclease YajDAdd BLAST115

Proteomic databases

PaxDbiP0AAQ2
PRIDEiP0AAQ2

Interactioni

Protein-protein interaction databases

BioGridi4262189, 13 interactors
IntActiP0AAQ2, 11 interactors
STRINGi316385.ECDH10B_0366

Structurei

3D structure databases

ProteinModelPortaliP0AAQ2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 75HNHAdd BLAST49

Sequence similaritiesi

Belongs to the HNH nuclease family.Curated

Phylogenomic databases

eggNOGiENOG4105N1F Bacteria
ENOG4111U2E LUCA
HOGENOMiHOG000294005
InParanoidiP0AAQ2
OMAiCHDNEHQ

Family and domain databases

CDDicd00085 HNHc, 1 hit
InterProiView protein in InterPro
IPR002711 HNH
IPR003615 HNH_nuc
PfamiView protein in Pfam
PF01844 HNH, 1 hit
SMARTiView protein in SMART
SM00507 HNHc, 1 hit

Sequencei

Sequence statusi: Complete.

P0AAQ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIIPKNYAR LESGYREKAL KIYPWVCGRC SREFVYSNLR ELTVHHIDHD
60 70 80 90 100
HTNNPEDGSN WELLCLYCHD HEHSKYTEAD QYGTTVIAGE DAQKDVGEAK
110
YNPFADLKAM MNKKK
Length:115
Mass (Da):13,364
Last modified:October 11, 2005 - v1
Checksum:i04D99E2E3FBAA0C7
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti109 – 115AMMNKKK → G in CAA39636 (PubMed:2170107).Curated7

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56175 Genomic DNA Translation: CAA39636.1
U82664 Genomic DNA Translation: AAB40166.1
U00096 Genomic DNA Translation: AAC73513.1
AP009048 Genomic DNA Translation: BAE76190.1
PIRiB64770
RefSeqiNP_414944.1, NC_000913.3
WP_000974813.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73513; AAC73513; b0410
BAE76190; BAE76190; BAE76190
GeneIDi945051
KEGGiecj:JW0400
eco:b0410
PATRICifig|511145.12.peg.426

Similar proteinsi

Entry informationi

Entry nameiYAJD_ECOLI
AccessioniPrimary (citable) accession number: P0AAQ2
Secondary accession number(s): P19678, P77666, Q2MC16
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 28, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

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