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Protein

Probable galactarate transporter

Gene

garP

Organism
Escherichia coli O157:H7
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Uptake of D-galactarate.By similarity

GO - Molecular functioni

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable galactarate transporter
Alternative name(s):
D-galactarate permease
Gene namesi
Name:garP
Ordered Locus Names:Z4479, ECs4005
OrganismiEscherichia coli O157:H7
Taxonomic identifieri83334 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000558 Componenti: Chromosome
  • UP000002519 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 11CytoplasmicSequence analysisAdd BLAST11
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21
Topological domaini33 – 56PeriplasmicSequence analysisAdd BLAST24
Transmembranei57 – 77HelicalSequence analysisAdd BLAST21
Topological domaini78 – 89CytoplasmicSequence analysisAdd BLAST12
Transmembranei90 – 110HelicalSequence analysisAdd BLAST21
Transmembranei111 – 131HelicalSequence analysisAdd BLAST21
Topological domaini132 – 157CytoplasmicSequence analysisAdd BLAST26
Transmembranei158 – 178HelicalSequence analysisAdd BLAST21
Transmembranei179 – 199HelicalSequence analysisAdd BLAST21
Topological domaini200 – 252CytoplasmicSequence analysisAdd BLAST53
Transmembranei253 – 273HelicalSequence analysisAdd BLAST21
Topological domaini274 – 288PeriplasmicSequence analysisAdd BLAST15
Transmembranei289 – 309HelicalSequence analysisAdd BLAST21
Topological domaini310 – 319CytoplasmicSequence analysis10
Transmembranei320 – 340HelicalSequence analysisAdd BLAST21
Topological domaini341 – 350PeriplasmicSequence analysis10
Transmembranei351 – 371HelicalSequence analysisAdd BLAST21
Topological domaini372 – 385CytoplasmicSequence analysisAdd BLAST14
Transmembranei386 – 406HelicalSequence analysisAdd BLAST21
Topological domaini407 – 413PeriplasmicSequence analysis7
Transmembranei414 – 434HelicalSequence analysisAdd BLAST21
Topological domaini435 – 444CytoplasmicSequence analysis10

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001213831 – 444Probable galactarate transporterAdd BLAST444

Interactioni

Protein-protein interaction databases

STRINGi155864.Z4479

Structurei

3D structure databases

ProteinModelPortaliP0AA81
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DJB Bacteria
ENOG410XPWC LUCA
HOGENOMiHOG000113642
KOiK12299
OMAiEWQTVFC

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
IPR000849 Sugar_P_transporter
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
PIRSFiPIRSF002808 Hexose_phosphate_transp, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

P0AA81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILDTVDEKK KGVHTRYLIL LIIFIVTAVN YADRATLSIA GTEVAKELQL
60 70 80 90 100
SAVSMGYIFS AFGWAYLLMQ IPGGWLLDKF GSKKVYTYSL FFWSLFTFLQ
110 120 130 140 150
GFVDMFPLAW AGISMFFMRF MLGFSEAPSF PANARIVAAW FPTKERGTAS
160 170 180 190 200
AIFNSAQYFS LALFSPLLGW LTFAWGWEHV FTVMGVIGFV LTALWIKLIH
210 220 230 240 250
NPTDHPRMSA EELKFISENG AVVDMDHKKP GSAAASGPKL HYIKQLLSNR
260 270 280 290 300
MMLGVFFGQY FINTITWFFL TWFPIYLVQE KGMSILKVGL VASIPALCGF
310 320 330 340 350
AGGVLGGVFS DYLIKRGLSL TLARKLPIVL GMLLASTIIL CNYTNNTTLV
360 370 380 390 400
VMLMALAFFG KGFGALGWPV ISDTAPKEIV GLCGGVFNVF GNVASIVTPL
410 420 430 440
VIGYLVSELH SFNAALVFVG CSALMAMVCY LFVVGDIKRM ELQK
Length:444
Mass (Da):49,009
Last modified:September 13, 2005 - v1
Checksum:i48FA27023B0C9D30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA Translation: AAG58257.1
BA000007 Genomic DNA Translation: BAB37428.1
PIRiE85974
E91129
RefSeqiNP_312032.1, NC_002695.1
WP_000599636.1, NZ_NOKN01000002.1

Genome annotation databases

EnsemblBacteriaiAAG58257; AAG58257; Z4479
BAB37428; BAB37428; BAB37428
GeneIDi916162
KEGGiece:Z4479
ecs:ECs4005
PATRICifig|386585.9.peg.4179

Similar proteinsi

Entry informationi

Entry nameiGARP_ECO57
AccessioniPrimary (citable) accession number: P0AA81
Secondary accession number(s): P42613
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: September 13, 2005
Last modified: April 25, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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