UniProtKB - P0A986 (CSPI_ECOLI)
Protein
Cold shock-like protein CspI
Gene
cspI
Organism
Escherichia coli (strain K12)
Status
Functioni
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
- nucleic acid binding Source: GO_Central
- RNA binding Source: GO_Central
- transcription antitermination factor activity, RNA binding Source: GO_Central
GO - Biological processi
- negative regulation of DNA-templated transcription, termination Source: GO_Central
- regulation of gene expression Source: GO_Central
- response to cold Source: EcoliWiki
Keywordsi
Molecular function | Activator, DNA-binding |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
BioCyci | EcoCyc:G6825-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Cold shock-like protein CspIShort name: CPS-I |
Gene namesi | Name:cspI Synonyms:cspJ Ordered Locus Names:b1552, JW1544 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
- Cytoplasm By similarity
GO - Cellular componenti
- cytosol Source: EcoCyc
Keywords - Cellular componenti
CytoplasmPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000100272 | 1 – 70 | Cold shock-like protein CspIAdd BLAST | 70 |
Proteomic databases
PaxDbi | P0A986 |
PRIDEi | P0A986 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4260240, 238 interactors |
DIPi | DIP-48195N |
IntActi | P0A986, 17 interactors |
STRINGi | 511145.b1552 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 7 – 67 | CSDAdd BLAST | 61 |
Phylogenomic databases
eggNOGi | COG1278, Bacteria |
HOGENOMi | CLU_117621_2_1_6 |
InParanoidi | P0A986 |
PhylomeDBi | P0A986 |
Family and domain databases
CDDi | cd04458, CSP_CDS, 1 hit |
InterProi | View protein in InterPro IPR012156, Cold_shock_CspA IPR011129, CSD IPR019844, CSD_1 IPR002059, CSP_DNA-bd IPR012340, NA-bd_OB-fold |
Pfami | View protein in Pfam PF00313, CSD, 1 hit |
PIRSFi | PIRSF002599, Cold_shock_A, 1 hit |
PRINTSi | PR00050, COLDSHOCK |
SMARTi | View protein in SMART SM00357, CSP, 1 hit |
SUPFAMi | SSF50249, SSF50249, 1 hit |
PROSITEi | View protein in PROSITE PS00352, CSD_1, 1 hit PS51857, CSD_2, 1 hit |
i Sequence
Sequence statusi: Complete.
P0A986-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSNKMTGLVK WFNPEKGFGF ITPKDGSKDV FVHFSAIQSN DFKTLTENQE
60 70
VEFGIENGPK GPAAVHVVAL
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC74625.1 AP009048 Genomic DNA Translation: BAA15254.1 |
PIRi | C64910 |
RefSeqi | NP_416070.1, NC_000913.3 WP_000066495.1, NZ_SSUV01000066.1 |
Genome annotation databases
EnsemblBacteriai | AAC74625; AAC74625; b1552 BAA15254; BAA15254; BAA15254 |
GeneIDi | 52076780 946099 |
KEGGi | ecj:JW1544 eco:b1552 |
PATRICi | fig|1411691.4.peg.712 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC74625.1 AP009048 Genomic DNA Translation: BAA15254.1 |
PIRi | C64910 |
RefSeqi | NP_416070.1, NC_000913.3 WP_000066495.1, NZ_SSUV01000066.1 |
3D structure databases
SMRi | P0A986 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4260240, 238 interactors |
DIPi | DIP-48195N |
IntActi | P0A986, 17 interactors |
STRINGi | 511145.b1552 |
Proteomic databases
PaxDbi | P0A986 |
PRIDEi | P0A986 |
Genome annotation databases
EnsemblBacteriai | AAC74625; AAC74625; b1552 BAA15254; BAA15254; BAA15254 |
GeneIDi | 52076780 946099 |
KEGGi | ecj:JW1544 eco:b1552 |
PATRICi | fig|1411691.4.peg.712 |
Organism-specific databases
EchoBASEi | EB3636 |
Phylogenomic databases
eggNOGi | COG1278, Bacteria |
HOGENOMi | CLU_117621_2_1_6 |
InParanoidi | P0A986 |
PhylomeDBi | P0A986 |
Enzyme and pathway databases
BioCyci | EcoCyc:G6825-MONOMER |
Miscellaneous databases
PROi | PR:P0A986 |
Family and domain databases
CDDi | cd04458, CSP_CDS, 1 hit |
InterProi | View protein in InterPro IPR012156, Cold_shock_CspA IPR011129, CSD IPR019844, CSD_1 IPR002059, CSP_DNA-bd IPR012340, NA-bd_OB-fold |
Pfami | View protein in Pfam PF00313, CSD, 1 hit |
PIRSFi | PIRSF002599, Cold_shock_A, 1 hit |
PRINTSi | PR00050, COLDSHOCK |
SMARTi | View protein in SMART SM00357, CSP, 1 hit |
SUPFAMi | SSF50249, SSF50249, 1 hit |
PROSITEi | View protein in PROSITE PS00352, CSD_1, 1 hit PS51857, CSD_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | CSPI_ECOLI | |
Accessioni | P0A986Primary (citable) accession number: P0A986 Secondary accession number(s): P77605 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 19, 2005 |
Last sequence update: | July 19, 2005 | |
Last modified: | December 2, 2020 | |
This is version 103 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |