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Protein

Outer membrane lipoprotein SlyB

Gene

slyB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6881-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Outer membrane lipoprotein SlyB
Gene namesi
Name:slyB
Ordered Locus Names:b1641, JW1633
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13409 slyB

Subcellular locationi

  • Cell outer membrane Curated; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

  • cell outer membrane Source: EcoCyc

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17PROSITE-ProRule annotationAdd BLAST17
ChainiPRO_000001816118 – 155Outer membrane lipoprotein SlyBAdd BLAST138

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi18N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi18S-diacylglycerol cysteinePROSITE-ProRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

EPDiP0A905
PaxDbiP0A905
PRIDEiP0A905

Expressioni

Inductioni

Induced by low extracellular levels of magnesium via the PhoQ/PhoP two-component regulatory system.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4263490, 212 interactors
IntActiP0A905, 4 interactors
STRINGi316385.ECDH10B_1775

Structurei

3D structure databases

ProteinModelPortaliP0A905
SMRiP0A905
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Pcp/SlyB lipoprotein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108XTF Bacteria
COG3133 LUCA
HOGENOMiHOG000220583
InParanoidiP0A905
KOiK06077
OMAiGCAYNSS

Family and domain databases

InterProiView protein in InterPro
IPR008816 Gly_zipper_2TM_dom
PfamiView protein in Pfam
PF05433 Rick_17kDa_Anti, 1 hit
PROSITEiView protein in PROSITE
PS51257 PROKAR_LIPOPROTEIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0A905-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIKRVLVVSM VGLSLVGCVN NDTLSGDVYT ASEAKQVQNV SYGTIVNVRP
60 70 80 90 100
VQIQGGDDSN VIGAIGGAVL GGFLGNTVGG GTGRSLATAA GAVAGGVAGQ
110 120 130 140 150
GVQSAMNKTQ GVELEIRKDD GNTIMVVQKQ GNTRFSPGQR VVLASNGSQV

TVSPR
Length:155
Mass (Da):15,602
Last modified:July 19, 2005 - v1
Checksum:i543EB8A4069A5FA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAT48133.1
AP009048 Genomic DNA Translation: BAA15402.1
PIRiC64921
RefSeqiWP_000597196.1, NZ_LN832404.1
YP_025304.1, NC_000913.3

Genome annotation databases

EnsemblBacteriaiAAT48133; AAT48133; b1641
BAA15402; BAA15402; BAA15402
GeneIDi946801
KEGGiecj:JW1633
eco:b1641
PATRICifig|1411691.4.peg.619

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAT48133.1
AP009048 Genomic DNA Translation: BAA15402.1
PIRiC64921
RefSeqiWP_000597196.1, NZ_LN832404.1
YP_025304.1, NC_000913.3

3D structure databases

ProteinModelPortaliP0A905
SMRiP0A905
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263490, 212 interactors
IntActiP0A905, 4 interactors
STRINGi316385.ECDH10B_1775

Proteomic databases

EPDiP0A905
PaxDbiP0A905
PRIDEiP0A905

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAT48133; AAT48133; b1641
BAA15402; BAA15402; BAA15402
GeneIDi946801
KEGGiecj:JW1633
eco:b1641
PATRICifig|1411691.4.peg.619

Organism-specific databases

EchoBASEiEB3185
EcoGeneiEG13409 slyB

Phylogenomic databases

eggNOGiENOG4108XTF Bacteria
COG3133 LUCA
HOGENOMiHOG000220583
InParanoidiP0A905
KOiK06077
OMAiGCAYNSS

Enzyme and pathway databases

BioCyciEcoCyc:G6881-MONOMER

Miscellaneous databases

PROiPR:P0A905

Family and domain databases

InterProiView protein in InterPro
IPR008816 Gly_zipper_2TM_dom
PfamiView protein in Pfam
PF05433 Rick_17kDa_Anti, 1 hit
PROSITEiView protein in PROSITE
PS51257 PROKAR_LIPOPROTEIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiSLYB_ECOLI
AccessioniPrimary (citable) accession number: P0A905
Secondary accession number(s): P55741, P76183
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: March 28, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
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Main funding by: National Institutes of Health

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