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Protein

UPF0304 protein YfbU

Gene

yfbU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G7188-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0304 protein YfbU
Gene namesi
Name:yfbU
Ordered Locus Names:b2294, JW2291
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14105 yfbU

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002181621 – 164UPF0304 protein YfbUAdd BLAST164

Proteomic databases

EPDiP0A8W8
PaxDbiP0A8W8
PRIDEiP0A8W8

Expressioni

Inductioni

Only a leaderless mRNA has been detected in vivo, the first nucleotide is the beginning of the start codon.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4262966, 24 interactors
DIPiDIP-48184N
IntActiP0A8W8, 11 interactors
STRINGi316385.ECDH10B_2456

Structurei

3D structure databases

ProteinModelPortaliP0A8W8
SMRiP0A8W8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0304 family.Curated

Phylogenomic databases

eggNOGiENOG4105XWI Bacteria
COG3013 LUCA
HOGENOMiHOG000272587
InParanoidiP0A8W8
KOiK09161
OMAiDKADHHF

Family and domain databases

Gene3Di1.10.287.680, 1 hit
1.10.3190.10, 1 hit
HAMAPiMF_00762 UPF0304, 1 hit
InterProiView protein in InterPro
IPR005587 UPF0304_YfbU
IPR023146 YfbU_alpha-helical_sf
IPR023145 YfbU_helix-hairpin_sf
PfamiView protein in Pfam
PF03887 YfbU, 1 hit
PIRSFiPIRSF006272 UCP006272, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD035118 YfbU, 1 hit

Sequencei

Sequence statusi: Complete.

P0A8W8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEMTNAQRLI LSNQYKMMTM LDPANAERYR RLQTIIERGY GLQMRELDRE
60 70 80 90 100
FGELKEETCR TIIDIMEMYH ALHVSWSNLQ DQQSIDERRV TFLGFDAATE
110 120 130 140 150
ARYLGYVRFM VNVEGRYTHF DAGTHGFNAQ TPMWEKYQRM LNVWHACPRQ
160
YHLSANEINQ IINA
Length:164
Mass (Da):19,536
Last modified:June 7, 2005 - v1
Checksum:i5599DD48CB373921
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC75354.2
AP009048 Genomic DNA Translation: BAE76685.1
RefSeqiNP_416797.2, NC_000913.3
WP_000426124.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75354; AAC75354; b2294
BAE76685; BAE76685; BAE76685
GeneIDi946767
KEGGiecj:JW2291
eco:b2294
PATRICifig|511145.12.peg.2388

Similar proteinsi

Entry informationi

Entry nameiYFBU_ECOLI
AccessioniPrimary (citable) accession number: P0A8W8
Secondary accession number(s): P76492, Q2MAM1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: March 28, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

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