UniProtKB - P0A8U2 (YAFD_ECOLI)
Protein
UPF0294 protein YafD
Gene
yafD
Organism
Escherichia coli (strain K12)
Status
Names & Taxonomyi
Protein namesi | Recommended name: UPF0294 protein YafD |
Gene namesi | Name:yafD Ordered Locus Names:b0209, JW5017 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
Cytoplasm and Cytosol
- Cytoplasm Curated
Other locations
- cytoplasm Source: UniProtKB-SubCell
Keywords - Cellular componenti
CytoplasmPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000074637 | 1 – 266 | UPF0294 protein YafDAdd BLAST | 266 |
Proteomic databases
jPOSTi | P0A8U2 |
PaxDbi | P0A8U2 |
PRIDEi | P0A8U2 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4261255, 229 interactors |
DIPi | DIP-47877N |
STRINGi | 511145.b0209 |
Family & Domainsi
Sequence similaritiesi
Belongs to the UPF0294 family.Curated
Phylogenomic databases
eggNOGi | COG3021, Bacteria |
HOGENOMi | CLU_083563_0_0_6 |
InParanoidi | P0A8U2 |
PhylomeDBi | P0A8U2 |
Family and domain databases
Gene3Di | 3.60.10.10, 1 hit |
HAMAPi | MF_01119, UPF0294, 1 hit |
InterProi | View protein in InterPro IPR036691, Endo/exonu/phosph_ase_sf IPR005135, Endo/exonuclease/phosphatase IPR022958, UPF0294 |
Pfami | View protein in Pfam PF03372, Exo_endo_phos, 1 hit |
SUPFAMi | SSF56219, SSF56219, 1 hit |
i Sequence
Sequence statusi: Complete.
P0A8U2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRKNTYAMRY VAGQPAERIL PPGSFASIGQ ALPPGEPLST EERIRILVWN
60 70 80 90 100
IYKQQRAEWL SVLKNYGKDA HLVLLQEAQT TPELVQFATA NYLAADQVPA
110 120 130 140 150
FVLPQHPSGV MTLSAAHPVY CCPLREREPI LRLAKSALVT VYPLPDTRLL
160 170 180 190 200
MVVNIHAVNF SLGVDVYSKQ LLPIGDQIAH HSGPVIMAGD FNAWSRRRMN
210 220 230 240 250
ALYRFAREMS LRQVRFTDDQ RRRAFGRPLD FVFYRGLNVS EASVLVTRAS
260
DHNPLLVEFS PGKPDK
Sequence cautioni
The sequence AAB08631 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAA02172 differs from that shown. Reason: Erroneous initiation.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 112 | T → S (PubMed:1663890).Curated | 1 | |
Sequence conflicti | 223 | R → G (PubMed:1663890).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D12650 Genomic DNA Translation: BAA02172.1 Different initiation. U70214 Genomic DNA Translation: AAB08631.1 Different initiation. U00096 Genomic DNA Translation: AAC73314.1 AP009048 Genomic DNA Translation: BAA77880.2 X60739 Genomic DNA No translation available. |
PIRi | C64745 |
RefSeqi | NP_414745.1, NC_000913.3 WP_001230983.1, NZ_STEB01000020.1 WP_001300451.1, NZ_JACEFS010000039.1 |
Genome annotation databases
EnsemblBacteriai | AAC73314; AAC73314; b0209 BAA77880; BAA77880; BAA77880 |
GeneIDi | 58391190 946286 |
KEGGi | ecj:JW5017 eco:b0209 |
PATRICi | fig|511145.12.peg.211 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D12650 Genomic DNA Translation: BAA02172.1 Different initiation. U70214 Genomic DNA Translation: AAB08631.1 Different initiation. U00096 Genomic DNA Translation: AAC73314.1 AP009048 Genomic DNA Translation: BAA77880.2 X60739 Genomic DNA No translation available. |
PIRi | C64745 |
RefSeqi | NP_414745.1, NC_000913.3 WP_001230983.1, NZ_STEB01000020.1 WP_001300451.1, NZ_JACEFS010000039.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 4261255, 229 interactors |
DIPi | DIP-47877N |
STRINGi | 511145.b0209 |
Proteomic databases
jPOSTi | P0A8U2 |
PaxDbi | P0A8U2 |
PRIDEi | P0A8U2 |
Genome annotation databases
EnsemblBacteriai | AAC73314; AAC73314; b0209 BAA77880; BAA77880; BAA77880 |
GeneIDi | 58391190 946286 |
KEGGi | ecj:JW5017 eco:b0209 |
PATRICi | fig|511145.12.peg.211 |
Organism-specific databases
EchoBASEi | EB1603 |
Phylogenomic databases
eggNOGi | COG3021, Bacteria |
HOGENOMi | CLU_083563_0_0_6 |
InParanoidi | P0A8U2 |
PhylomeDBi | P0A8U2 |
Enzyme and pathway databases
BioCyci | EcoCyc:EG11650-MONOMER |
Miscellaneous databases
PROi | PR:P0A8U2 |
Family and domain databases
Gene3Di | 3.60.10.10, 1 hit |
HAMAPi | MF_01119, UPF0294, 1 hit |
InterProi | View protein in InterPro IPR036691, Endo/exonu/phosph_ase_sf IPR005135, Endo/exonuclease/phosphatase IPR022958, UPF0294 |
Pfami | View protein in Pfam PF03372, Exo_endo_phos, 1 hit |
SUPFAMi | SSF56219, SSF56219, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YAFD_ECOLI | |
Accessioni | P0A8U2Primary (citable) accession number: P0A8U2 Secondary accession number(s): P30865, P75671 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 7, 2005 |
Last sequence update: | June 7, 2005 | |
Last modified: | April 7, 2021 | |
This is version 97 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Uncharacterized protein families (UPF)
List of uncharacterized protein family (UPF) entries - SIMILARITY comments
Index of protein domains and families