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Protein

50S ribosomal protein L30

Gene

rpmD

Organism
Staphylococcus aureus (strain NCTC 8325)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciSAUR93061:G1G5Y-2357-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L30UniRule annotation
Gene namesi
Name:rpmDUniRule annotation
Ordered Locus Names:SAOUHSC_02493
OrganismiStaphylococcus aureus (strain NCTC 8325)
Taxonomic identifieri93061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000008816 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001046111 – 5950S ribosomal protein L30Add BLAST59

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi93061.SAOUHSC_02493

Structurei

Secondary structure

159
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 8Combined sources6
Helixi17 – 25Combined sources9
Beta strandi34 – 38Combined sources5
Helixi41 – 49Combined sources9
Helixi50 – 53Combined sources4
Beta strandi54 – 56Combined sources3

3D structure databases

ProteinModelPortaliP0A0G2
SMRiP0A0G2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL30 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VPB Bacteria
COG1841 LUCA
HOGENOMiHOG000039916
KOiK02907
OMAiIGGKQNQ

Family and domain databases

CDDicd01658 Ribosomal_L30, 1 hit
Gene3Di3.30.1390.20, 1 hit
HAMAPiMF_01371_B Ribosomal_L30_B, 1 hit
InterProiView protein in InterPro
IPR036919 L30_ferredoxin-like_sf
IPR005996 Ribosomal_L30_bac-type
IPR016082 Ribosomal_L30_ferredoxin-like
PANTHERiPTHR15892 PTHR15892, 1 hit
PfamiView protein in Pfam
PF00327 Ribosomal_L30, 1 hit
PIRSFiPIRSF002211 Ribosomal_L30_bac-type, 1 hit
SUPFAMiSSF55129 SSF55129, 1 hit
TIGRFAMsiTIGR01308 rpmD_bact, 1 hit

Sequencei

Sequence statusi: Complete.

P0A0G2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKLQITLTR SVIGRPETQR KTVEALGLKK TNSSVVVEDN PAIRGQINKV

KHLVTVEEK
Length:59
Mass (Da):6,554
Last modified:March 1, 2005 - v1
Checksum:i6625A0E67A7C26B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U96620 Genomic DNA Translation: AAB54020.1
CP000253 Genomic DNA Translation: ABD31512.1
RefSeqiWP_001096577.1, NC_007795.1
YP_500961.1, NC_007795.1

Genome annotation databases

EnsemblBacteriaiABD31512; ABD31512; SAOUHSC_02493
GeneIDi3920870
KEGGisao:SAOUHSC_02493
PATRICifig|93061.5.peg.2249

Similar proteinsi

Entry informationi

Entry nameiRL30_STAA8
AccessioniPrimary (citable) accession number: P0A0G2
Secondary accession number(s): O06444, Q2FW24
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: March 1, 2005
Last modified: March 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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