UniProtKB - P09012 (SNRPA_HUMAN)
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- BLAST>sp|P09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A OS=Homo sapiens OX=9606 GN=SNRPA PE=1 SV=3 MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPA TKKAVQGGGATPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQI PPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
- Align
U1 small nuclear ribonucleoprotein A
SNRPA
Annotation score:5 out of 5
<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>Select a section on the left to see content.
<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni
<p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
- Ref.5"The snRNP-free U1A (SF-A) complex(es): identification of the largest subunit as PSF, the polypyrimidine-tract binding protein-associated splicing factor."
Lutz C.S., Cooke C., O'Connor J.P., Kobayashi R., Alwine J.C.
RNA 4:1493-1499(1998) [PubMed] [Europe PMC] [Abstract]Cited for: FUNCTION IN COUPLED SPLICING, FUNCTION IN POLYADENYLATION PROCESS, INTERACTION WITH SFPQ, IDENTIFICATION IN A SNRNP-FREE COMPLEX WITH SFPQ.
<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni
- identical protein binding Source: IntAct <p>Inferred from Physical Interaction</p> <p>Covers physical interactions between the gene product of interest and another molecule (or ion, or complex).</p> <p>More information in the <a href="http://geneontology.org/page/guide-go-evidence-codes#ipi">GO evidence code guide</a></p> Inferred from physical interactioni
- RNA binding Source: UniProtKB <p>Inferred from Direct Assay</p> <p>Used to indicate a direct assay for the function, process or component indicated by the GO term.</p> <p>More information in the <a href="http://geneontology.org/page/guide-go-evidence-codes#ida">GO evidence code guide</a></p> Inferred from direct assayi
- snRNA stem-loop binding Source: GO_Central
- U1 snRNA binding Source: GO_Central
- U1 snRNP binding Source: Ensembl
<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi
- mRNA splicing, via spliceosome Source: GO_Central
- regulation of mRNA polyadenylation Source: Ensembl
<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi
| Molecular function | Ribonucleoprotein, RNA-binding |
| Biological process | mRNA processing, mRNA splicing |
Enzyme and pathway databases
Reactome - a knowledgebase of biological pathways and processes More...Reactomei | R-HSA-72163 mRNA Splicing - Major Pathway |
<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi
| <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi | Recommended name: U1 small nuclear ribonucleoprotein AShort name: U1 snRNP A Short name: U1-A Short name: U1A |
| <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi | Name:SNRPA |
| <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>Organismi | Homo sapiens (Human) |
| <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri | 9606 [NCBI] |
| <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineagei | cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo |
| <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi |
|
Organism-specific databases
Eukaryotic Pathogen Database Resources More...EuPathDBi | HostDB:ENSG00000077312.8 |
Human Gene Nomenclature Database More...HGNCi | HGNC:11151 SNRPA |
Online Mendelian Inheritance in Man (OMIM) More...MIMi | 182285 gene |
neXtProt; the human protein knowledge platform More...neXtProti | NX_P09012 |
<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi
Nucleus
Nucleus
- nucleoplasm Source: HPA
- spliceosomal complex Source: HGNC <p>Inferred from Direct Assay</p> <p>Used to indicate a direct assay for the function, process or component indicated by the GO term.</p> <p>More information in the <a href="http://geneontology.org/page/guide-go-evidence-codes#ida">GO evidence code guide</a></p> Inferred from direct assayi
- U1 snRNP Source: UniProtKB <p>Inferred from Direct Assay</p> <p>Used to indicate a direct assay for the function, process or component indicated by the GO term.</p> <p>More information in the <a href="http://geneontology.org/page/guide-go-evidence-codes#ida">GO evidence code guide</a></p> Inferred from direct assayi
<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti
Nucleus, Spliceosome<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi
Mutagenesis
| Feature key | Position(s) | DescriptionActions | Graphical view | Length |
|---|---|---|---|---|
| <p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi | 11 | T → V: Abolishes RNA binding. 1 Publication <p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
| 1 | |
| <p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi | 13 | Y → F: Substantially reduces RNA binding. 1 Publication <p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
| 1 | |
| <p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi | 15 | N → V: Abolishes RNA binding. 1 Publication <p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
| 1 | |
| <p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi | 16 | N → V: Substantially reduces RNA binding. 1 Publication <p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
| 1 | |
| <p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi | 52 | R → Q: Abolishes RNA binding. 1 Publication <p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
| 1 |
Organism-specific databases
DisGeNET More...DisGeNETi | 6626 |
Open Targets More...OpenTargetsi | ENSG00000077312 |
The Pharmacogenetics and Pharmacogenomics Knowledge Base More...PharmGKBi | PA35993 |
Chemistry databases
Drug and drug target database More...DrugBanki | DB02175 Malonic acid |
Polymorphism and mutation databases
BioMuta curated single-nucleotide variation and disease association database More...BioMutai | SNRPA |
Domain mapping of disease mutations (DMDM) More...DMDMi | 134092 |
<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi
Molecule processing
| Feature key | Position(s) | DescriptionActions | Graphical view | Length |
|---|---|---|---|---|
| <p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methioninei | RemovedCombined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei
<p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
| |||
| <p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_0000081887 | 2 – 282 | U1 small nuclear ribonucleoprotein AAdd BLAST | 281 |
Amino acid modifications
| Feature key | Position(s) | DescriptionActions | Graphical view | Length |
|---|---|---|---|---|
| <p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei | 2 | N-acetylalanineCombined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei
<p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
| 1 | |
| <p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei | 60 | N6-acetyllysineCombined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei
| 1 | |
| <p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei | 131 | PhosphothreonineCombined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei
| 1 | |
| <p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei | 152 | Omega-N-methylarginineCombined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei
| 1 |
<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi
Acetylation, Methylation, PhosphoproteinProteomic databases
Encyclopedia of Proteome Dynamics More...EPDi | P09012 |
MaxQB - The MaxQuant DataBase More...MaxQBi | P09012 |
PaxDb, a database of protein abundance averages across all three domains of life More...PaxDbi | P09012 |
PeptideAtlas More...PeptideAtlasi | P09012 |
PRoteomics IDEntifications database More...PRIDEi | P09012 |
ProteomicsDB human proteome resource More...ProteomicsDBi | 52184 |
Consortium for Top Down Proteomics More...TopDownProteomicsi | P09012 |
PTM databases
iPTMnet integrated resource for PTMs in systems biology context More...iPTMneti | P09012 |
Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat. More...PhosphoSitePlusi | P09012 |
<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni
Gene expression databases
Bgee dataBase for Gene Expression Evolution More...Bgeei | ENSG00000077312 |
CleanEx database of gene expression profiles More...CleanExi | HS_SNRPA |
ExpressionAtlas, Differential and Baseline Expression More...ExpressionAtlasi | P09012 baseline and differential |
Genevisible search portal to normalized and curated expression data from Genevestigator More...Genevisiblei | P09012 HS |
Organism-specific databases
Human Protein Atlas More...HPAi | CAB004652 HPA046440 HPA054834 |
<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni
<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei
<p>Manually curated information for which there is published experimental evidence.</p> <p><a href="/manual/evidences#ECO:0000269">More...</a></p> Manual assertion based on experiment ini
- Ref.5"The snRNP-free U1A (SF-A) complex(es): identification of the largest subunit as PSF, the polypyrimidine-tract binding protein-associated splicing factor."
Lutz C.S., Cooke C., O'Connor J.P., Kobayashi R., Alwine J.C.
RNA 4:1493-1499(1998) [PubMed] [Europe PMC] [Abstract]Cited for: FUNCTION IN COUPLED SPLICING, FUNCTION IN POLYADENYLATION PROCESS, INTERACTION WITH SFPQ, IDENTIFICATION IN A SNRNP-FREE COMPLEX WITH SFPQ.
<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi
| With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| itself | 4 | EBI-607085,EBI-607085 | ||
| CIRBP | Q14011 | 3 | EBI-607085,EBI-538850 | |
| ENOX2 | Q16206-2 | 3 | EBI-607085,EBI-10179508 | |
| GABPB1 | Q06547 | 3 | EBI-607085,EBI-618165 | |
| HNRNPK | P61978 | 4 | EBI-607085,EBI-304185 | |
| LENG8 | Q96PV6 | 5 | EBI-607085,EBI-739546 | |
| METTL13 | Q8N6R0 | 3 | EBI-607085,EBI-1053295 | |
| MTUS2 | Q5JR59 | 3 | EBI-607085,EBI-742948 | |
| NDUFAF3 | Q9BU61 | 5 | EBI-607085,EBI-2114801 | |
| NDUFAF3 | Q9BU61-2 | 3 | EBI-607085,EBI-10298649 | |
| PBP2 | P38151 | 3 | EBI-607085,EBI-12968 | From Saccharomyces cerevisiae (strain ATCC 204508 / S288c). |
| PCBP1 | Q15365 | 5 | EBI-607085,EBI-946095 | |
| PCBP2 | Q15366 | 3 | EBI-607085,EBI-945799 | |
| PTBP1 | P26599 | 5 | EBI-607085,EBI-350540 | |
| QKI | Q96PU8 | 3 | EBI-607085,EBI-945792 | |
| RBM3 | P98179 | 5 | EBI-607085,EBI-2949699 | |
| RBMX | P38159 | 3 | EBI-607085,EBI-743526 | |
| RBPMS2 | Q6ZRY4 | 4 | EBI-607085,EBI-11987469 | |
| RNPS1 | Q15287 | 2 | EBI-607085,EBI-395959 | |
| SFPQ | P23246 | 4 | EBI-607085,EBI-355453 | |
| SNRPA1 | P09661 | 6 | EBI-607085,EBI-876439 | |
| TRIM27 | P14373 | 5 | EBI-607085,EBI-719493 | |
| TRIR | Q9BQ61 | 4 | EBI-607085,EBI-744881 | |
| U2AF2 | P26368 | 5 | EBI-607085,EBI-742339 | |
| U2AF2 | P26368-2 | 4 | EBI-607085,EBI-11097439 |
<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni
- identical protein binding Source: IntAct <p>Inferred from Physical Interaction</p> <p>Covers physical interactions between the gene product of interest and another molecule (or ion, or complex).</p> <p>More information in the <a href="http://geneontology.org/page/guide-go-evidence-codes#ipi">GO evidence code guide</a></p> Inferred from physical interactioni
Protein-protein interaction databases
The Biological General Repository for Interaction Datasets (BioGrid) More...BioGridi | 112510, 96 interactors |
CORUM comprehensive resource of mammalian protein complexes More...CORUMi | P09012 |
Database of interacting proteins More...DIPi | DIP-29407N |
Protein interaction database and analysis system More...IntActi | P09012, 75 interactors |
Molecular INTeraction database More...MINTi | P09012 |
STRING: functional protein association networks More...STRINGi | 9606.ENSP00000243563 |
<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei
Secondary structure
| Feature key | Position(s) | DescriptionActions | Graphical view | Length |
|---|---|---|---|---|
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 10 – 16 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 7 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 19 – 21 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 3 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 23 – 34 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 12 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 35 – 37 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 3 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 40 – 44 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 5 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 47 – 51 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 5 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 55 – 61 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 7 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 62 – 72 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 11 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined hydrogen-bonded turns within the protein sequence. These elements correspond to the DSSP secondary structure code ‘T’.<p><a href='/help/turn' target='_top'>More...</a></p>Turni | 77 – 79 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 3 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 83 – 86 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 4 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 93 – 96 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 4 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 97 – 100 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 4 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 208 – 213 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 6 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 221 – 229 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 9 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 234 – 238 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 5 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined beta strands within the protein sequence.<p><a href='/help/strand' target='_top'>More...</a></p>Beta strandi | 246 – 253 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 8 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 254 – 263 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 10 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined hydrogen-bonded turns within the protein sequence. These elements correspond to the DSSP secondary structure code ‘T’.<p><a href='/help/turn' target='_top'>More...</a></p>Turni | 264 – 266 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 3 | |
| <p>This subsection of the ‘Structure’ section is used to indicate the positions of experimentally determined helical regions within the protein sequence.<p><a href='/help/helix' target='_top'>More...</a></p>Helixi | 269 – 271 | Combined sources <p>Manually validated information inferred from a combination of experimental and computational evidence.</p> <p><a href="/manual/evidences#ECO:0000244">More...</a></p> Manual assertion inferred from combination of experimental and computational evidencei | 3 |
3D structure databases
Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase More...ProteinModelPortali | P09012 |
SWISS-MODEL Repository - a database of annotated 3D protein structure models More...SMRi | P09012 |
Database of comparative protein structure models More...ModBasei | Search... |
MobiDB: a database of protein disorder and mobility annotations More...MobiDBi | Search... |
Miscellaneous databases
Relative evolutionary importance of amino acids within a protein sequence More...EvolutionaryTracei | P09012 |
<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi
Domains and Repeats
| Feature key | Position(s) | DescriptionActions | Graphical view | Length |
|---|---|---|---|---|
| <p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini | 10 – 89 | RRM 1PROSITE-ProRule annotation <p>Manual validated information which has been generated by the UniProtKB automatic annotation system.</p> <p><a href="/manual/evidences#ECO:0000255">More...</a></p> Manual assertion according to rulesi Add BLAST | 80 | |
| <p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini | 208 – 282 | RRM 2PROSITE-ProRule annotation <p>Manual validated information which has been generated by the UniProtKB automatic annotation system.</p> <p><a href="/manual/evidences#ECO:0000255">More...</a></p> Manual assertion according to rulesi Add BLAST | 75 |
Compositional bias
| Feature key | Position(s) | DescriptionActions | Graphical view | Length |
|---|---|---|---|---|
| <p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi | 140 – 206 | Pro-richAdd BLAST | 67 |
<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi
<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini
RepeatPhylogenomic databases
evolutionary genealogy of genes: Non-supervised Orthologous Groups More...eggNOGi | KOG4206 Eukaryota ENOG410XPZI LUCA |
Ensembl GeneTree More...GeneTreei | ENSGT00390000007046 |
The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms More...HOGENOMi | HOG000217519 |
The HOVERGEN Database of Homologous Vertebrate Genes More...HOVERGENi | HBG000895 |
InParanoid: Eukaryotic Ortholog Groups More...InParanoidi | P09012 |
KEGG Orthology (KO) More...KOi | K11091 |
Identification of Orthologs from Complete Genome Data More...OMAi | ALHNYKL |
Database of Orthologous Groups More...OrthoDBi | EOG091G0NFU |
Database for complete collections of gene phylogenies More...PhylomeDBi | P09012 |
TreeFam database of animal gene trees More...TreeFami | TF313834 |
Family and domain databases
Conserved Domains Database More...CDDi | cd12477 RRM1_U1A, 1 hit cd12480 RRM2_U1A, 1 hit |
Gene3D Structural and Functional Annotation of Protein Families More...Gene3Di | 3.30.70.330, 2 hits |
Integrated resource of protein families, domains and functional sites More...InterProi | View protein in InterPro IPR012677 Nucleotide-bd_a/b_plait_sf IPR035979 RBD_domain_sf IPR000504 RRM_dom IPR034407 U1A_RRM1 IPR034409 U1A_RRM2 |
Pfam protein domain database More...Pfami | View protein in Pfam PF00076 RRM_1, 2 hits |
Simple Modular Architecture Research Tool; a protein domain database More...SMARTi | View protein in SMART SM00360 RRM, 2 hits |
Superfamily database of structural and functional annotation More...SUPFAMi | SSF54928 SSF54928, 2 hits |
PROSITE; a protein domain and family database More...PROSITEi | View protein in PROSITE PS50102 RRM, 2 hits |
<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei
<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.
<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.
10 20 30 40 50
MAVPETRPNH TIYINNLNEK IKKDELKKSL YAIFSQFGQI LDILVSRSLK
60 70 80 90 100
MRGQAFVIFK EVSSATNALR SMQGFPFYDK PMRIQYAKTD SDIIAKMKGT
110 120 130 140 150
FVERDRKREK RKPKSQETPA TKKAVQGGGA TPVVGAVQGP VPGMPPMTQA
160 170 180 190 200
PRIMHHMPGQ PPYMPPPGMI PPPGLAPGQI PPGAMPPQQL MPGQMPPAQP
210 220 230 240 250
LSENPPNHIL FLTNLPEETN ELMLSMLFNQ FPGFKEVRLV PGRHDIAFVE
260 270 280
FDNEVQAGAA RDALQGFKIT QNNAMKISFA KK
Sequence databases
| Select the link destinations: EMBL nucleotide sequence database More...EMBLiGenBank nucleotide sequence database More...GenBankiDNA Data Bank of Japan; a nucleotide sequence database More...DDBJiLinks Updated | M60784 , M60779, M60780, M60781, M60782, M60783 Genomic DNA Translation: AAA61245.1 X06347 mRNA Translation: CAA29653.1 BC000405 mRNA Translation: AAH00405.1 BC008290 mRNA Translation: AAH08290.1 |
The Consensus CDS (CCDS) project More...CCDSi | CCDS12565.1 |
Protein sequence database of the Protein Information Resource More...PIRi | JQ1528 |
NCBI Reference Sequences More...RefSeqi | NP_004587.1, NM_004596.4 |
UniGene gene-oriented nucleotide sequence clusters More...UniGenei | Hs.466775 |
Genome annotation databases
Ensembl eukaryotic genome annotation project More...Ensembli | ENST00000243563; ENSP00000243563; ENSG00000077312 |
Database of genes from NCBI RefSeq genomes More...GeneIDi | 6626 |
KEGG: Kyoto Encyclopedia of Genes and Genomes More...KEGGi | hsa:6626 |
UCSC genome browser More...UCSCi | uc002ooz.4 human |
<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi
| Protein | Similar proteins | Species | Score | Length | |
|---|---|---|---|---|---|
| P09012 | U1 small nuclear ribonucleoprotein A (Fragment) | 184 | |||
| U1 small nuclear ribonucleoprotein A (Fragment) | 142 | ||||
| U1 small nuclear ribonucleoprotein A (Fragment) | 148 |
| Protein | Similar proteins | Species | Score | Length | |
|---|---|---|---|---|---|
| P09012 | U1 small nuclear ribonucleoprotein A (Fragment) | 184 | |||
| U1 small nuclear ribonucleoprotein A | 334 | ||||
| Small nuclear ribonucleoprotein polypeptide A | 287 | ||||
| Small nuclear ribonucleoprotein polypeptide A | 287 | ||||
| U1 small nuclear ribonucleoprotein A | 284 | ||||
| +58 | |||||
| Protein | Similar proteins | Species | Score | Length | |
|---|---|---|---|---|---|
| P09012 | U1 small nuclear ribonucleoprotein A (Fragment) | 184 | |||
| U1 small nuclear ribonucleoprotein A | 334 | ||||
| Small nuclear ribonucleoprotein polypeptide A | 287 | ||||
| Small nuclear ribonucleoprotein polypeptide A | 287 | ||||
| UPI00042B9F6F | 284 | ||||
| +214 | |||||
<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi
Sequence databases
| Select the link destinations: EMBL nucleotide sequence database More...EMBLiGenBank nucleotide sequence database More...GenBankiDNA Data Bank of Japan; a nucleotide sequence database More...DDBJiLinks Updated | M60784 , M60779, M60780, M60781, M60782, M60783 Genomic DNA Translation: AAA61245.1 X06347 mRNA Translation: CAA29653.1 BC000405 mRNA Translation: AAH00405.1 BC008290 mRNA Translation: AAH08290.1 |
The Consensus CDS (CCDS) project More...CCDSi | CCDS12565.1 |
Protein sequence database of the Protein Information Resource More...PIRi | JQ1528 |
NCBI Reference Sequences More...RefSeqi | NP_004587.1, NM_004596.4 |
UniGene gene-oriented nucleotide sequence clusters More...UniGenei | Hs.466775 |
3D structure databases
| Select the link destinations: Protein Data Bank Europe More...PDBeiProtein Data Bank RCSB More...RCSB PDBiProtein Data Bank Japan More...PDBjiLinks Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
| 1AUD | NMR | - | A | 2-102 | [»] | |
| 1DRZ | X-ray | 2.30 | A | 2-98 | [»] | |
| 1DZ5 | NMR | - | A/B | 2-102 | [»] | |
| 1FHT | NMR | - | A | 2-117 | [»] | |
| 1M5K | X-ray | 2.40 | C/F | 1-100 | [»] | |
| 1M5O | X-ray | 2.20 | C/F | 1-100 | [»] | |
| 1M5P | X-ray | 2.60 | C/F | 1-100 | [»] | |
| 1M5V | X-ray | 2.40 | C/F | 1-100 | [»] | |
| 1NU4 | X-ray | 1.80 | A/B | 2-98 | [»] | |
| 1OIA | X-ray | 2.40 | A/B | 1-95 | [»] | |
| 1SJ3 | X-ray | 2.20 | P | 1-100 | [»] | |
| 1SJ4 | X-ray | 2.70 | P | 1-100 | [»] | |
| 1SJF | X-ray | 2.75 | A | 1-100 | [»] | |
| 1U6B | X-ray | 3.10 | A | 1-98 | [»] | |
| 1URN | X-ray | 1.92 | A/B/C | 2-98 | [»] | |
| 1VBX | X-ray | 2.70 | A | 1-100 | [»] | |
| 1VBY | X-ray | 2.90 | A | 1-100 | [»] | |
| 1VBZ | X-ray | 2.80 | A | 1-100 | [»] | |
| 1VC0 | X-ray | 2.50 | A | 1-100 | [»] | |
| 1VC5 | X-ray | 3.40 | A | 1-100 | [»] | |
| 1VC6 | X-ray | 2.80 | A | 1-100 | [»] | |
| 1ZZN | X-ray | 3.37 | A | 1-98 | [»] | |
| 2A3J | NMR | - | A | 3-80 | [»] | |
| 2NZ4 | X-ray | 2.50 | A/B/C/D | 5-98 | [»] | |
| 2OIH | X-ray | 2.40 | A | 2-100 | [»] | |
| 2OJ3 | X-ray | 2.90 | A | 2-100 | [»] | |
| 2U1A | NMR | - | A | 195-282 | [»] | |
| 3BO2 | X-ray | 3.31 | A | 4-98 | [»] | |
| 3BO3 | X-ray | 3.40 | A | 4-98 | [»] | |
| 3BO4 | X-ray | 3.33 | A | 4-98 | [»] | |
| 3CUL | X-ray | 2.80 | A/B | 1-96 | [»] | |
| 3CUN | X-ray | 3.00 | A/B | 1-98 | [»] | |
| 3EGZ | X-ray | 2.20 | A | 1-98 | [»] | |
| 3G8S | X-ray | 3.10 | A/B/C/D | 1-98 | [»] | |
| 3G8T | X-ray | 3.00 | A/B/C/D | 1-98 | [»] | |
| 3G96 | X-ray | 3.01 | A/B/C/D | 1-98 | [»] | |
| 3G9C | X-ray | 2.90 | A/B/C/D | 1-98 | [»] | |
| 3HHN | X-ray | 2.99 | B/D | 2-98 | [»] | |
| 3IIN | X-ray | 4.18 | A | 4-98 | [»] | |
| 3IRW | X-ray | 2.70 | P | 1-98 | [»] | |
| 3IWN | X-ray | 3.20 | C/D | 6-96 | [»] | |
| 3K0J | X-ray | 3.10 | A/B/C/D | 2-97 | [»] | |
| 3L3C | X-ray | 2.85 | A/B/C/D | 7-96 | [»] | |
| 3MUM | X-ray | 2.90 | P | 1-98 | [»] | |
| 3MUR | X-ray | 3.00 | P | 1-98 | [»] | |
| 3MUT | X-ray | 3.00 | P | 1-98 | [»] | |
| 3MUV | X-ray | 3.20 | P | 1-98 | [»] | |
| 3MXH | X-ray | 2.30 | P | 1-98 | [»] | |
| 3P49 | X-ray | 3.55 | B | 1-98 | [»] | |
| 3PGW | X-ray | 4.40 | A/P | 1-282 | [»] | |
| 3R1H | X-ray | 3.15 | A/D | 1-98 | [»] | |
| 3R1L | X-ray | 3.12 | A/D | 1-98 | [»] | |
| 3UCU | X-ray | 2.80 | P | 1-98 | [»] | |
| 3UCZ | X-ray | 2.80 | P | 1-98 | [»] | |
| 3UD3 | X-ray | 3.10 | P | 1-98 | [»] | |
| 3UD4 | X-ray | 2.70 | P | 1-98 | [»] | |
| 3UTR | model | - | B/D | 1-98 | [»] | |
| 4C4W | X-ray | 2.95 | A/B/E/F | 1-102 | [»] | |
| 4PR6 | X-ray | 2.30 | A | 4-96 | [»] | |
| 4PRF | X-ray | 2.40 | A | 1-100 | [»] | |
| 4W90 | X-ray | 3.12 | B | 6-96 | [»] | |
| 4W92 | X-ray | 3.21 | B | 6-96 | [»] | |
| 4YB1 | X-ray | 2.08 | P | 7-97 | [»] | |
| 5DDO | X-ray | 3.10 | C/G | 2-98 | [»] | |
| 5DDP | X-ray | 2.30 | C/D | 2-98 | [»] | |
| 5DDQ | X-ray | 2.40 | C/D | 2-98 | [»] | |
| 5DDR | X-ray | 2.60 | C/D | 2-98 | [»] | |
| 5FJ4 | X-ray | 2.95 | A/B/E/F | 1-102 | [»] | |
Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase More...ProteinModelPortali | P09012 | |||||
SWISS-MODEL Repository - a database of annotated 3D protein structure models More...SMRi | P09012 | |||||
Database of comparative protein structure models More...ModBasei | Search... | |||||
MobiDB: a database of protein disorder and mobility annotations More...MobiDBi | Search... | |||||
Protein-protein interaction databases
The Biological General Repository for Interaction Datasets (BioGrid) More...BioGridi | 112510, 96 interactors |
CORUM comprehensive resource of mammalian protein complexes More...CORUMi | P09012 |
Database of interacting proteins More...DIPi | DIP-29407N |
Protein interaction database and analysis system More...IntActi | P09012, 75 interactors |
Molecular INTeraction database More...MINTi | P09012 |
STRING: functional protein association networks More...STRINGi | 9606.ENSP00000243563 |
Chemistry databases
Drug and drug target database More...DrugBanki | DB02175 Malonic acid |
PTM databases
iPTMnet integrated resource for PTMs in systems biology context More...iPTMneti | P09012 |
Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat. More...PhosphoSitePlusi | P09012 |
Polymorphism and mutation databases
BioMuta curated single-nucleotide variation and disease association database More...BioMutai | SNRPA |
Domain mapping of disease mutations (DMDM) More...DMDMi | 134092 |
Proteomic databases
Encyclopedia of Proteome Dynamics More...EPDi | P09012 |
MaxQB - The MaxQuant DataBase More...MaxQBi | P09012 |
PaxDb, a database of protein abundance averages across all three domains of life More...PaxDbi | P09012 |
PeptideAtlas More...PeptideAtlasi | P09012 |
PRoteomics IDEntifications database More...PRIDEi | P09012 |
ProteomicsDB human proteome resource More...ProteomicsDBi | 52184 |
Consortium for Top Down Proteomics More...TopDownProteomicsi | P09012 |
Protocols and materials databases
| Structural Biology Knowledgebase | Search... |
Genome annotation databases
Ensembl eukaryotic genome annotation project More...Ensembli | ENST00000243563; ENSP00000243563; ENSG00000077312 |
Database of genes from NCBI RefSeq genomes More...GeneIDi | 6626 |
KEGG: Kyoto Encyclopedia of Genes and Genomes More...KEGGi | hsa:6626 |
UCSC genome browser More...UCSCi | uc002ooz.4 human |
Organism-specific databases
Comparative Toxicogenomics Database More...CTDi | 6626 |
DisGeNET More...DisGeNETi | 6626 |
Eukaryotic Pathogen Database Resources More...EuPathDBi | HostDB:ENSG00000077312.8 |
GeneCards: human genes, protein and diseases More...GeneCardsi | SNRPA |
Human Gene Nomenclature Database More...HGNCi | HGNC:11151 SNRPA |
Human Protein Atlas More...HPAi | CAB004652 HPA046440 HPA054834 |
Online Mendelian Inheritance in Man (OMIM) More...MIMi | 182285 gene |
neXtProt; the human protein knowledge platform More...neXtProti | NX_P09012 |
Open Targets More...OpenTargetsi | ENSG00000077312 |
The Pharmacogenetics and Pharmacogenomics Knowledge Base More...PharmGKBi | PA35993 |
GenAtlas: human gene database More...GenAtlasi | Search... |
Phylogenomic databases
evolutionary genealogy of genes: Non-supervised Orthologous Groups More...eggNOGi | KOG4206 Eukaryota ENOG410XPZI LUCA |
Ensembl GeneTree More...GeneTreei | ENSGT00390000007046 |
The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms More...HOGENOMi | HOG000217519 |
The HOVERGEN Database of Homologous Vertebrate Genes More...HOVERGENi | HBG000895 |
InParanoid: Eukaryotic Ortholog Groups More...InParanoidi | P09012 |
KEGG Orthology (KO) More...KOi | K11091 |
Identification of Orthologs from Complete Genome Data More...OMAi | ALHNYKL |
Database of Orthologous Groups More...OrthoDBi | EOG091G0NFU |
Database for complete collections of gene phylogenies More...PhylomeDBi | P09012 |
TreeFam database of animal gene trees More...TreeFami | TF313834 |
Enzyme and pathway databases
Reactome - a knowledgebase of biological pathways and processes More...Reactomei | R-HSA-72163 mRNA Splicing - Major Pathway |
Miscellaneous databases
ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data More...ChiTaRSi | SNRPA human |
Relative evolutionary importance of amino acids within a protein sequence More...EvolutionaryTracei | P09012 |
The Gene Wiki collection of pages on human genes and proteins More...GeneWikii | Small_nuclear_ribonucleoprotein_polypeptide_A |
Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens More...GenomeRNAii | 6626 |
Protein Ontology More...PROi | PR:P09012 |
The Stanford Online Universal Resource for Clones and ESTs More...SOURCEi | Search... |
Gene expression databases
Bgee dataBase for Gene Expression Evolution More...Bgeei | ENSG00000077312 |
CleanEx database of gene expression profiles More...CleanExi | HS_SNRPA |
ExpressionAtlas, Differential and Baseline Expression More...ExpressionAtlasi | P09012 baseline and differential |
Genevisible search portal to normalized and curated expression data from Genevestigator More...Genevisiblei | P09012 HS |
Family and domain databases
Conserved Domains Database More...CDDi | cd12477 RRM1_U1A, 1 hit cd12480 RRM2_U1A, 1 hit |
Gene3D Structural and Functional Annotation of Protein Families More...Gene3Di | 3.30.70.330, 2 hits |
Integrated resource of protein families, domains and functional sites More...InterProi | View protein in InterPro IPR012677 Nucleotide-bd_a/b_plait_sf IPR035979 RBD_domain_sf IPR000504 RRM_dom IPR034407 U1A_RRM1 IPR034409 U1A_RRM2 |
Pfam protein domain database More...Pfami | View protein in Pfam PF00076 RRM_1, 2 hits |
Simple Modular Architecture Research Tool; a protein domain database More...SMARTi | View protein in SMART SM00360 RRM, 2 hits |
Superfamily database of structural and functional annotation More...SUPFAMi | SSF54928 SSF54928, 2 hits |
PROSITE; a protein domain and family database More...PROSITEi | View protein in PROSITE PS50102 RRM, 2 hits |
ProtoNet; Automatic hierarchical classification of proteins More...ProtoNeti | Search... |
<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi
| <p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry namei | SNRPA_HUMAN | |
| <p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>Accessioni | P09012Primary (citable) accession number: P09012 | |
| <p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1988 |
| Last sequence update: | January 23, 2007 | |
| Last modified: | July 18, 2018 | |
| This is version 214 of the entry and version 3 of the sequence. See complete history. | ||
| <p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
| Annotation program | Chordata Protein Annotation Program | |
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | |
<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi
<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi
3D-structure, Complete proteome, Direct protein sequencing, Reference proteomeDocuments
- Human chromosome 19
Human chromosome 19: entries, gene names and cross-references to MIM - MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families
