Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
We will be switching to the new UniProt website on Tuesday, June 28. Please explore and share your feedback. Take me to UniProt BETA

UniProtKB - P07252 (CBP1_YEAST)

Entry version 139 (25 May 2022)
Sequence version 1 (01 Apr 1988)
Previous versions | rss
Add a publicationFeedback
Protein

Cytochrome B pre-mRNA-processing protein 1

Gene

CBP1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Responsible for conferring a stable 5'-end on cytochrome b mRNA.

Miscellaneous

Present with 2180 molecules/cell in log phase SD medium.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • mRNA binding Source: SGD
Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processmRNA processing

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Cytochrome B pre-mRNA-processing protein 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CBP1
Ordered Locus Names:YJL209W
ORF Names:HRA654, J0242
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559292 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002311 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome X

Organism-specific databases

Saccharomyces Genome Database

More...SGDi		S000003745, CBP1

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		FungiDB:YJL209W

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000893781 – 654Cytochrome B pre-mRNA-processing protein 1Add BLAST654

Proteomic databases

MaxQB - The MaxQuant DataBase

More...MaxQBi		P07252

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		P07252

PRoteomics IDEntifications database

More...PRIDEi		P07252

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		P07252

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		33549, 87 interactors

Protein interaction database and analysis system

More...IntActi		P07252, 1 interactor

Molecular INTeraction database

More...MINTi		P07252

STRING: functional protein association networks

More...STRINGi		4932.YJL209W

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		P07252, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

AlphaFold Protein Structure Database

More...AlphaFoldDBi		P07252

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG502R3QS, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_429070_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		P07252

Identification of Orthologs from Complete Genome Data

More...OMAi		MHLKFND

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P07252-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFLPRLVRYR TERFIKMVPT RTLRRINHSS RDPIQKQVLA LIKANANLND 
        60         70         80         90        100
NDKLKIRKYW SDMADYKSLR KQENSLLESS ILHEVKIEDF ISFINRTKTS 
       110        120        130        140        150
SMTTRGIYRR ECLYQCKKNL DLVNQVVSQV SSVRHQKPLT TQLDTMRWCV 
       160        170        180        190        200
DDAIGTGDIV MAADLFLLYY RLFTDDKKLD EQYAKKIISV LAYPNPLHDH 
       210        220        230        240        250
VHLVKYLQLN SLFESITGGG IKLTRFQLET LSNKALGLSN EAPQLCKAIL 
       260        270        280        290        300
NKLMNINYSL TNDLKLRDDQ VLLAYKSIDE NYRRGNVASV YSIWNKIKEH 
       310        320        330        340        350
YVSISAHDSR IIYKVFKICT HNRAYRSICS EMFWQLTPEY YCNNPLILPA 
       360        370        380        390        400
IIDFITKQDS LTMAKELMQN INRYTLPENH HIVWLNKRCL SSLLRMHLKF 
       410        420        430        440        450
NDSNGVDRVL KQITTNFRAL SQENYQAIII HLFKTQNLDH IAKAVKLLDT 
       460        470        480        490        500
IPPGQAMLAY GSIINEVVDW KLASKVKFTD NLMALVNDLL TKAHDFDPDH 
       510        520        530        540        550
RNSLWNVVSA LYIKKLCHYK KRDGKFVANA KKDIDLAKLL YINAAKRSKT 
       560        570        580        590        600
YWTKSNCNPF IASSPCDVKL KVNNQNRFTI LRNIALSALQ IGRTDIFLWA 
       610        620        630        640        650
CAELYQNGMT IEELKLDWNF ILKHQIRNSE FKTNKEIIQD IKKHGVSAVK 

RYLR
Length:654
Mass (Da):76,172
Last modified:April 1, 1988 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2453B03280E1C44D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
K02647 Genomic DNA Translation: AAA34474.1
Z34098 Genomic DNA Translation: CAA84002.1
Z49484 Genomic DNA Translation: CAA89506.1
M28067 Genomic DNA Translation: AAA34456.1
BK006943 Genomic DNA Translation: DAA08601.1

Protein sequence database of the Protein Information Resource

More...PIRi		S05829, BVBYP1

NCBI Reference Sequences

More...RefSeqi		NP_012326.1, NM_001181642.1

Genome annotation databases

Ensembl fungal genome annotation project

More...EnsemblFungii		YJL209W_mRNA; YJL209W; YJL209W

Database of genes from NCBI RefSeq genomes

More...GeneIDi		853221

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sce:YJL209W

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02647 Genomic DNA Translation: AAA34474.1
Z34098 Genomic DNA Translation: CAA84002.1
Z49484 Genomic DNA Translation: CAA89506.1
M28067 Genomic DNA Translation: AAA34456.1
BK006943 Genomic DNA Translation: DAA08601.1
PIRiS05829, BVBYP1
RefSeqiNP_012326.1, NM_001181642.1

3D structure databases

AlphaFoldDBiP07252
ModBaseiSearch...
SWISS-MODEL-WorkspaceiSubmit a new modelling project...

Protein-protein interaction databases

BioGRIDi33549, 87 interactors
IntActiP07252, 1 interactor
MINTiP07252
STRINGi4932.YJL209W

PTM databases

iPTMnetiP07252

Proteomic databases

MaxQBiP07252
PaxDbiP07252
PRIDEiP07252

Genome annotation databases

EnsemblFungiiYJL209W_mRNA; YJL209W; YJL209W
GeneIDi853221
KEGGisce:YJL209W

Organism-specific databases

SGDiS000003745, CBP1
VEuPathDBiFungiDB:YJL209W

Phylogenomic databases

eggNOGiENOG502R3QS, Eukaryota
HOGENOMiCLU_429070_0_0_1
InParanoidiP07252
OMAiMHLKFND

Miscellaneous databases

Protein Ontology

More...PROi		PR:P07252
RNActiP07252, protein

Family and domain databases

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCBP1_YEAST
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P07252
Secondary accession number(s): D6VVY5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 1, 1988
Last sequence update: April 1, 1988
Last modified: May 25, 2022
This is version 139 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome X
    Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again