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Protein

Photosystem II 10 kDa polypeptide, chloroplastic

Gene

PSBR

Organism
Solanum tuberosum (Potato)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Associated with the oxygen-evolving complex of photosystem II.

GO - Biological processi

Keywordsi

Biological processPhotosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Photosystem II 10 kDa polypeptide, chloroplastic
Alternative name(s):
Light-inducible tissue-specific ST-LS1 protein
Gene namesi
Name:PSBR
OrganismiSolanum tuberosum (Potato)
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
Proteomesi
  • UP000011115 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Membrane, Photosystem II, Plastid, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 39ChloroplastAdd BLAST39
ChainiPRO_000002936440 – 138Photosystem II 10 kDa polypeptide, chloroplasticAdd BLAST99

Expressioni

Inductioni

By light.

Gene expression databases

ExpressionAtlasiP06183 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400057257

Structurei

3D structure databases

SMRiP06183
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the psbR family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IX24 Eukaryota
ENOG4112AV0 LUCA
InParanoidiP06183
KOiK03541

Family and domain databases

InterProiView protein in InterPro
IPR006814 PSII_PsbR
PANTHERiPTHR34369 PTHR34369, 1 hit
PfamiView protein in Pfam
PF04725 PsbR, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P06183-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASTVMSSLS LKPTFTLEKT SVKGLPSLAR SSSSFKVVAS GVKKLKTDKP
60 70 80 90 100
YGINGSMALR DGVDASGRKP KGKGVYQYVD KYGANVDGYS PIYNTDEWSP
110 120 130
SGDVYVGGTT GLAIWAVTLV GILAGGALLV YNTSALAQ
Length:138
Mass (Da):14,375
Last modified:January 1, 1988 - v1
Checksum:iAA25EB9F9323736C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti34S → P in CAA27989 (Ref. 1) Curated1
Sequence conflicti63V → L in CAA27989 (Ref. 1) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04753 Genomic DNA Translation: CAA28450.1
X04401 mRNA Translation: CAA27989.1
PIRiS00411
RefSeqiNP_001275173.1, NM_001288244.1
UniGeneiStu.5057

Genome annotation databases

GeneIDi102586254
KEGGisot:102586254

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04753 Genomic DNA Translation: CAA28450.1
X04401 mRNA Translation: CAA27989.1
PIRiS00411
RefSeqiNP_001275173.1, NM_001288244.1
UniGeneiStu.5057

3D structure databases

SMRiP06183
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400057257

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102586254
KEGGisot:102586254

Phylogenomic databases

eggNOGiENOG410IX24 Eukaryota
ENOG4112AV0 LUCA
InParanoidiP06183
KOiK03541

Gene expression databases

ExpressionAtlasiP06183 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR006814 PSII_PsbR
PANTHERiPTHR34369 PTHR34369, 1 hit
PfamiView protein in Pfam
PF04725 PsbR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiPSBR_SOLTU
AccessioniPrimary (citable) accession number: P06183
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1988
Last sequence update: January 1, 1988
Last modified: September 12, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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