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Protein

Ig kappa chain C region, B allele

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Ig kappa chain C region, B allele
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000153605‹1 – 106Ig kappa chain C region, B alleleAdd BLAST›106

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi26 ↔ 86
Disulfide bondi106Interchain (with a heavy chain)

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP01835
PRIDEiP01835

Expressioni

Gene expression databases

GenevisibleiP01835 RN

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000066644

Structurei

Secondary structure

1106
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 10Combined sources5
Helixi14 – 17Combined sources4
Turni18 – 20Combined sources3
Beta strandi21 – 34Combined sources14
Beta strandi37 – 42Combined sources6
Beta strandi45 – 47Combined sources3
Beta strandi51 – 55Combined sources5
Turni60 – 62Combined sources3
Beta strandi65 – 74Combined sources10
Helixi75 – 79Combined sources5
Beta strandi83 – 89Combined sources7
Turni91 – 93Combined sources3
Beta strandi94 – 96Combined sources3
Beta strandi97 – 102Combined sources6

3D structure databases

ProteinModelPortaliP01835
SMRiP01835
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP01835

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 102Ig-likeAdd BLAST98

Keywords - Domaini

Immunoglobulin C region, Immunoglobulin domain

Phylogenomic databases

eggNOGiENOG410J107 Eukaryota
ENOG41115Q6 LUCA
HOVERGENiHBG039526
InParanoidiP01835

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003006 Ig/MHC_CS
IPR003597 Ig_C1-set
PfamiView protein in Pfam
PF07654 C1-set, 1 hit
SMARTiView protein in SMART
SM00407 IGc1, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS00290 IG_MHC, 1 hit

Sequencei

Sequence statusi: Complete.

P01835-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ADAAPTVSIF PPSTEQLATG GASVVCLMNN FYPRDISVKW KIDGTERRDG
60 70 80 90 100
VLDSVTDQDS KDSTYSMSST LSLTKADYES HNLYTCEVVH KTSSSPVVKS

FNRNEC
Length:106
Mass (Da):11,601
Last modified:July 21, 1986 - v1
Checksum:i4CFA7CA820D1CA36
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei11
Sequence conflicti2D → N AA sequence (PubMed:807630).Curated1
Sequence conflicti30N → K AA sequence (PubMed:807630).Curated1
Sequence conflicti48Missing AA sequence (PubMed:807630).Curated1
Sequence conflicti79E → Q AA sequence (PubMed:807630).Curated1
Sequence conflicti87E → Q AA sequence (PubMed:807630).Curated1
Sequence conflicti98V → VW AA sequence (PubMed:807630).Curated1
Sequence conflicti100S → N AA sequence (PubMed:807630).Curated1

Sequence databases

PIRiA93901 K1RTB
UniGeneiRn.126980

Similar proteinsi

Entry informationi

Entry nameiKACB_RAT
AccessioniPrimary (citable) accession number: P01835
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: October 25, 2017
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

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