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Protein

Putidaredoxin

Gene

camB

Organism
Pseudomonas putida (Arthrobacter siderocapsulatus)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation.

Cofactori

[2Fe-2S] clusterNote: Binds 1 [2Fe-2S] cluster.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi40Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1 Publication1
Metal bindingi46Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1 Publication1
Metal bindingi49Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1 Publication1
Metal bindingi87Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1 Publication1

GO - Molecular functioni

Keywordsi

Biological processElectron transport, Transport
Ligand2Fe-2S, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-3502

Names & Taxonomyi

Protein namesi
Recommended name:
Putidaredoxin
Short name:
PDX
Gene namesi
Name:camB
OrganismiPseudomonas putida (Arthrobacter siderocapsulatus)
Taxonomic identifieri303 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00002011622 – 107PutidaredoxinAdd BLAST106

Interactioni

Subunit structurei

Monomer.

Binary interactionsi

WithEntry#Exp.IntActNotes
camCP001833EBI-15706395,EBI-15706256

Protein-protein interaction databases

DIPiDIP-29810N
IntActiP00259, 1 interactor

Structurei

Secondary structure

1107
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP00259
SMRiP00259
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP00259

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 1062Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd BLAST105

Sequence similaritiesi

Belongs to the adrenodoxin/putidaredoxin family.Curated

Family and domain databases

CDDicd00207 fer2, 1 hit
Gene3Di3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR001055 Adrenodoxin
IPR018298 Adrenodoxin_Fe-S_BS
IPR012675 Beta-grasp_dom_sf
PfamiView protein in Pfam
PF00111 Fer2, 1 hit
PRINTSiPR00355 ADRENODOXIN
SUPFAMiSSF54292 SSF54292, 1 hit
PROSITEiView protein in PROSITE
PS51085 2FE2S_FER_2, 1 hit
PS00814 ADX, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P00259-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSKVVYVSHD GTRRELDVAD GVSLMQAAVS NGIYDIVGDC GGSASCATCH
60 70 80 90 100
VYVNEAFTDK VPAANEREIG MLECVTAELK PNSRLCCQII MTPELDGIVV

DVPDRQW
Length:107
Mass (Da):11,550
Last modified:January 23, 2007 - v3
Checksum:iF487E481F8BEE2C9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti15E → Q AA sequence (PubMed:4833743).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05406 Genomic DNA Translation: AAA25759.1
D00528 Genomic DNA Translation: BAA00414.1
PIRiJX0079 PXPSEP

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05406 Genomic DNA Translation: AAA25759.1
D00528 Genomic DNA Translation: BAA00414.1
PIRiJX0079 PXPSEP

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GPXNMR-A2-107[»]
1OQQX-ray1.47A/B2-107[»]
1OQRX-ray1.65A/B/C2-107[»]
1PDXNMR-A2-107[»]
1PUTNMR-A2-107[»]
1R7SX-ray1.91A/B/C2-107[»]
1XLNX-ray2.03A/B2-107[»]
1XLOX-ray1.84A/B2-107[»]
1XLPX-ray2.00A/B/C2-107[»]
1XLQX-ray1.45A/B/C2-107[»]
1YJINMR-A2-107[»]
1YJJNMR-A2-107[»]
2M56NMR-B2-107[»]
3LB8X-ray2.60C/D2-107[»]
3W9CX-ray2.50B2-107[»]
4JWSX-ray2.15C/D2-107[»]
4JWUX-ray2.20C/D1-107[»]
4JX1X-ray2.09C/D/G/H1-107[»]
5GXGX-ray1.70B2-107[»]
ProteinModelPortaliP00259
SMRiP00259
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-29810N
IntActiP00259, 1 interactor

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-3502

Miscellaneous databases

EvolutionaryTraceiP00259

Family and domain databases

CDDicd00207 fer2, 1 hit
Gene3Di3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR001055 Adrenodoxin
IPR018298 Adrenodoxin_Fe-S_BS
IPR012675 Beta-grasp_dom_sf
PfamiView protein in Pfam
PF00111 Fer2, 1 hit
PRINTSiPR00355 ADRENODOXIN
SUPFAMiSSF54292 SSF54292, 1 hit
PROSITEiView protein in PROSITE
PS51085 2FE2S_FER_2, 1 hit
PS00814 ADX, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiPUTX_PSEPU
AccessioniPrimary (citable) accession number: P00259
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: January 23, 2007
Last modified: December 20, 2017
This is version 121 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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Main funding by: National Institutes of Health

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