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UniProtKB - O95772 (STR3N_HUMAN)

Entry version 161 (02 Dec 2020)
Sequence version 1 (01 May 1999)
Previous versions | rss
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Protein

STARD3 N-terminal-like protein

Gene

STARD3NL

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Tethering protein that creates contact site between the endoplasmic reticulum and late endosomes: localizes to late endosome membranes and contacts the endoplasmic reticulum via interaction with VAPA and VAPB (PubMed:24105263).1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...PathwayCommonsi		O95772

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-196108, Pregnenolone biosynthesis

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
STARD3 N-terminal-like protein1 Publication
Alternative name(s):
MLN64 N-terminal domain homolog
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:STARD3NL1 PublicationImported
Synonyms:MENTHO1 Publication
ORF Names:UNQ855/PRO1864
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 7

Organism-specific databases

Eukaryotic Pathogen and Host Database Resources

More...EuPathDBi		HostDB:ENSG00000010270.13

Human Gene Nomenclature Database

More...HGNCi		HGNC:19169, STARD3NL

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		611759, gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_O95772

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 53Cytoplasmic1 PublicationAdd BLAST53
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei54 – 74HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini75 – 97ExtracellularSequence analysisAdd BLAST23
Transmembranei98 – 118HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini119 – 122CytoplasmicSequence analysis4
Transmembranei123 – 143HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini144 – 150ExtracellularSequence analysis7
Transmembranei151 – 171HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini172 – 234Cytoplasmic1 PublicationAdd BLAST63

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Endosome, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi209 – 234Missing : Loss of interaction with MOSPD2. 1 PublicationAdd BLAST26

Organism-specific databases

Open Targets

More...OpenTargetsi		ENSG00000010270

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA134990065

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		O95772, Tbio

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		STARD3NL

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000216661 – 234STARD3 N-terminal-like proteinAdd BLAST234

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineCombined sources1
Modified residuei15PhosphoserineCombined sources1
Modified residuei21PhosphoserineCombined sources1
Modified residuei27PhosphoserineCombined sources1
Modified residuei193PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

The CPTAC Assay portal

More...CPTACi		CPTAC-1196
CPTAC-1197

Encyclopedia of Proteome Dynamics

More...EPDi		O95772

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		O95772

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		O95772

MaxQB - The MaxQuant DataBase

More...MaxQBi		O95772

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		O95772

PeptideAtlas

More...PeptideAtlasi		O95772

PRoteomics IDEntifications database

More...PRIDEi		O95772

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		51038 [O95772-1]
51039 [O95772-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		O95772

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		O95772

SwissPalm database of S-palmitoylation events

More...SwissPalmi		O95772

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000010270, Expressed in secondary oocyte and 208 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		O95772, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		O95772, HS

Organism-specific databases

Human Protein Atlas

More...HPAi		ENSG00000010270, Low tissue specificity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer (PubMed:16709157).

Interacts (via the MENTAL domain) with STARD3NL (PubMed:16709157).

Interacts (via FFAT motif) with VAPA.

Interacts (via FFAT motif) with VAPB (PubMed:24105263).

Interacts (via FFAT motif) with MOSPD2 (via MSP domain) (PubMed:29858488).

3 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		123815, 11 interactors

Protein interaction database and analysis system

More...IntActi		O95772, 7 interactors

Molecular INTeraction database

More...MINTi		O95772

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000009041

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		O95772, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		O95772

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini48 – 218MENTALPROSITE-ProRule annotationAdd BLAST171

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi208 – 213FFAT2 Publications6

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The FFAT motif mediates interaction with VAPA, VAPB and MOSPD2.1 Publication
The MENTAL domain anchors the protein in endosome membranes and exposes the START domain in the cytosol (By similarity). It binds cholesterol and mediates homotypic as well as heterotypic interactions between STARD3 and STARD3NL (PubMed:15718238, PubMed:16709157).By similarity2 Publications

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the STARD3 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG3845, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00940000155476

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		O95772

Identification of Orthologs from Complete Genome Data

More...OMAi		ICKLRHW

Database for complete collections of gene phylogenies

More...PhylomeDBi		O95772

TreeFam database of animal gene trees

More...TreeFami		TF313869

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR019498, MENTAL

Pfam protein domain database

More...Pfami		View protein in Pfam
PF10457, MENTAL, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51439, MENTAL, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative initiation. AlignAdd to basket

This entry has 2 described isoforms and 4 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: O95772-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MNHLPEDMEN ALTGSQSSHA SLRNIHSINP TQLMARIESY EGREKKGISD 
        60         70         80         90        100
VRRTFCLFVT FDLLFVTLLW IIELNVNGGI ENTLEKEVMQ YDYYSSYFDI 
       110        120        130        140        150
FLLAVFRFKV LILAYAVCRL RHWWAIALTT AVTSAFLLAK VILSKLFSQG 
       160        170        180        190        200
AFGYVLPIIS FILAWIETWF LDFKVLPQEA EEENRLLIVQ DASERAALIP 
       210        220        230 
GGLSDGQFYS PPESEAGSEE AEEKQDSEKP LLEL
Length:234
Mass (Da):26,655
Last modified:May 1, 1999 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAFB7DAE381983FB0
GO
Isoform 2 (identifier: O95772-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-7: Missing.

Show »
Length:227
Mass (Da):25,818
Checksum:i1313F76EC5C9CA91
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
C9JKL2C9JKL2_HUMAN
STARD3 N-terminal-like protein
STARD3NL
216Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
C9JPX5C9JPX5_HUMAN
STARD3 N-terminal-like protein
STARD3NL
206Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
C9J3F5C9J3F5_HUMAN
STARD3 N-terminal-like protein
STARD3NL
184Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
C9JJ39C9JJ39_HUMAN
STARD3 N-terminal-like protein
STARD3NL
172Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0188191 – 7Missing in isoform 2. Curated7

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AJ492267 mRNA Translation: CAD37353.1
AY358645 mRNA Translation: AAQ89008.1
AK315404 mRNA Translation: BAG37796.1
AC006033 Genomic DNA Translation: AAS07552.1
CH236951 Genomic DNA Translation: EAL23983.1
CH471073 Genomic DNA Translation: EAW94088.1
BC003074 mRNA Translation: AAH03074.1
BC005959 mRNA Translation: AAH05959.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS5455.1 [O95772-1]

NCBI Reference Sequences

More...RefSeqi		NP_114405.1, NM_032016.3 [O95772-1]
XP_005249937.1, XM_005249880.1
XP_011513874.1, XM_011515572.1 [O95772-1]
XP_016868181.1, XM_017012692.1
XP_016868182.1, XM_017012693.1 [O95772-1]
XP_016868183.1, XM_017012694.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000009041; ENSP00000009041; ENSG00000010270 [O95772-1]
ENST00000396013; ENSP00000379334; ENSG00000010270 [O95772-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		83930

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:83930

UCSC genome browser

More...UCSCi		uc003tfr.4, human [O95772-1]

Keywords - Coding sequence diversityi

Alternative initiation

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ492267 mRNA Translation: CAD37353.1
AY358645 mRNA Translation: AAQ89008.1
AK315404 mRNA Translation: BAG37796.1
AC006033 Genomic DNA Translation: AAS07552.1
CH236951 Genomic DNA Translation: EAL23983.1
CH471073 Genomic DNA Translation: EAW94088.1
BC003074 mRNA Translation: AAH03074.1
BC005959 mRNA Translation: AAH05959.1
CCDSiCCDS5455.1 [O95772-1]
RefSeqiNP_114405.1, NM_032016.3 [O95772-1]
XP_005249937.1, XM_005249880.1
XP_011513874.1, XM_011515572.1 [O95772-1]
XP_016868181.1, XM_017012692.1
XP_016868182.1, XM_017012693.1 [O95772-1]
XP_016868183.1, XM_017012694.1

3D structure databases

SMRiO95772
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi123815, 11 interactors
IntActiO95772, 7 interactors
MINTiO95772
STRINGi9606.ENSP00000009041

PTM databases

iPTMnetiO95772
PhosphoSitePlusiO95772
SwissPalmiO95772

Polymorphism and mutation databases

BioMutaiSTARD3NL

Proteomic databases

CPTACiCPTAC-1196
CPTAC-1197
EPDiO95772
jPOSTiO95772
MassIVEiO95772
MaxQBiO95772
PaxDbiO95772
PeptideAtlasiO95772
PRIDEiO95772
ProteomicsDBi51038 [O95772-1]
51039 [O95772-2]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		3121, 22 antibodies

The DNASU plasmid repository

More...DNASUi		83930

Genome annotation databases

EnsembliENST00000009041; ENSP00000009041; ENSG00000010270 [O95772-1]
ENST00000396013; ENSP00000379334; ENSG00000010270 [O95772-1]
GeneIDi83930
KEGGihsa:83930
UCSCiuc003tfr.4, human [O95772-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		83930
EuPathDBiHostDB:ENSG00000010270.13

GeneCards: human genes, protein and diseases

More...GeneCardsi		STARD3NL
HGNCiHGNC:19169, STARD3NL
HPAiENSG00000010270, Low tissue specificity
MIMi611759, gene
neXtProtiNX_O95772
OpenTargetsiENSG00000010270
PharmGKBiPA134990065

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG3845, Eukaryota
GeneTreeiENSGT00940000155476
InParanoidiO95772
OMAiICKLRHW
PhylomeDBiO95772
TreeFamiTF313869

Enzyme and pathway databases

PathwayCommonsiO95772
ReactomeiR-HSA-196108, Pregnenolone biosynthesis

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		83930, 4 hits in 841 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		STARD3NL, human

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		STARD3NL

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		83930
PharosiO95772, Tbio

Protein Ontology

More...PROi		PR:O95772
RNActiO95772, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000010270, Expressed in secondary oocyte and 208 other tissues
ExpressionAtlasiO95772, baseline and differential
GenevisibleiO95772, HS

Family and domain databases

InterProiView protein in InterPro
IPR019498, MENTAL
PfamiView protein in Pfam
PF10457, MENTAL, 1 hit
PROSITEiView protein in PROSITE
PS51439, MENTAL, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSTR3N_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O95772
Secondary accession number(s): A4D1X0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 15, 2002
Last sequence update: May 1, 1999
Last modified: December 2, 2020
This is version 161 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families
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