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UniProtKB - O94599 (YC8B_SCHPO)
Protein
LIMR family protein C622.11
Gene
SPCC622.11
Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Names & Taxonomyi
Protein namesi | Recommended name: LIMR family protein C622.11 |
Gene namesi | ORF Names:SPCC622.11 |
Organismi | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) |
Taxonomic identifieri | 284812 [NCBI] |
Taxonomic lineagei | Eukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces › |
Proteomesi |
|
Organism-specific databases
PomBasei | SPCC622.11 |
VEuPathDBi | FungiDB:SPCC622.11 |
Subcellular locationi
Golgi apparatus
- Golgi apparatus membrane 1 Publication; Multi-pass membrane protein 1 Publication
Golgi apparatus
- Golgi apparatus Source: PomBase
- Golgi membrane Source: UniProtKB-SubCell
Other locations
- cytoplasm Source: PomBase
- integral component of membrane Source: UniProtKB-KW
- membrane Source: GO_Central
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 1 – 22 | LumenalSequence analysisAdd BLAST | 22 | |
Transmembranei | 23 – 43 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 44 – 55 | CytoplasmicSequence analysisAdd BLAST | 12 | |
Transmembranei | 56 – 76 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 77 – 87 | LumenalSequence analysisAdd BLAST | 11 | |
Transmembranei | 88 – 108 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 109 – 121 | CytoplasmicSequence analysisAdd BLAST | 13 | |
Transmembranei | 122 – 142 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 143 – 164 | LumenalSequence analysisAdd BLAST | 22 | |
Transmembranei | 165 – 185 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 186 – 198 | CytoplasmicSequence analysisAdd BLAST | 13 | |
Transmembranei | 199 – 219 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 220 – 329 | LumenalSequence analysisAdd BLAST | 110 | |
Transmembranei | 330 – 350 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 351 | CytoplasmicSequence analysis | 1 | |
Transmembranei | 352 – 372 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 373 – 380 | LumenalSequence analysis | 8 | |
Transmembranei | 381 – 401 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 402 – 479 | CytoplasmicSequence analysisAdd BLAST | 78 | |
Transmembranei | 480 – 500 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 501 – 562 | LumenalSequence analysisAdd BLAST | 62 |
Keywords - Cellular componenti
Golgi apparatus, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000339412 | 1 – 562 | LIMR family protein C622.11Add BLAST | 562 |
Proteomic databases
PaxDbi | O94599 |
PRIDEi | O94599 |
PTM databases
iPTMneti | O94599 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 275393, 1 interactor |
STRINGi | 4896.SPCC622.11.1 |
Structurei
Family & Domainsi
Sequence similaritiesi
Belongs to the LIMR family.Curated
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | KOG2296, Eukaryota |
HOGENOMi | CLU_546474_0_0_1 |
InParanoidi | O94599 |
OMAi | IPNGRSN |
PhylomeDBi | O94599 |
Family and domain databases
InterProi | View protein in InterPro IPR006876, LMBR1-like_membr_prot |
Pfami | View protein in Pfam PF04791, LMBR1, 1 hit |
i Sequence
Sequence statusi: Complete.
O94599-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSSWFNVGIL CLLRFKNVQD NKIIFEAIFE VFLHFLKIPV YMTHLGFPIT
60 70 80 90 100
PTVCLIEMLG LLLLLLIPAL FTLIWIYKYI EPHSLISIPG IFVFLGLYVP
110 120 130 140 150
FVVTLLIPID VTWDVSLSIW RFLYWLTFVL SWIILPFVQG YMESKFSTPR
160 170 180 190 200
SRLSDSFYKN LRYYLLLTFL TCVVIAYLRF ALRTMSFSNF KELVISLTYF
210 220 230 240 250
WGLLFVIFLL GNGFVYVPVS MWKKAFITKR AALLERQAVG VYSKLQARLE
260 270 280 290 300
SYSLPSSSIS LNNGRNQSSS DFFTSSLTDH AFNPHSSPNG MSNVIALQTT
310 320 330 340 350
WNQMVKEYNR IMLIKTAKAS GSYRLYLPDS YIPIHPVVAY AFYVWILPAF
360 370 380 390 400
RILFSIFMAS MSVIIVVSEV FLHTQYSLVG IILQKFTNSS ATSIFVSFLF
410 420 430 440 450
VYYMRYCTYK SLMRTQFAPH YYYALVPFRA TNTASLIYFA SQLCRLTLPL
460 470 480 490 500
CYNFVSLQPY PTQFHQFYGE SIDLLPLGNL ISKRYPTFIL LPIIFSMISL
510 520 530 540 550
KYRLRQFIYS ITLRKSSSAS SSDDFDDSSL NSENDDDLFN ETSAAYLAEG
560
RALLLGTNNA HV
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU329672 Genomic DNA Translation: CAA21867.1 |
PIRi | T41491 |
RefSeqi | NP_588183.1, NM_001023173.2 |
Genome annotation databases
EnsemblFungii | SPCC622.11.1; SPCC622.11.1:pep; SPCC622.11 |
GeneIDi | 2538812 |
KEGGi | spo:SPCC622.11 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU329672 Genomic DNA Translation: CAA21867.1 |
PIRi | T41491 |
RefSeqi | NP_588183.1, NM_001023173.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 275393, 1 interactor |
STRINGi | 4896.SPCC622.11.1 |
PTM databases
iPTMneti | O94599 |
Proteomic databases
PaxDbi | O94599 |
PRIDEi | O94599 |
Genome annotation databases
EnsemblFungii | SPCC622.11.1; SPCC622.11.1:pep; SPCC622.11 |
GeneIDi | 2538812 |
KEGGi | spo:SPCC622.11 |
Organism-specific databases
PomBasei | SPCC622.11 |
VEuPathDBi | FungiDB:SPCC622.11 |
Phylogenomic databases
eggNOGi | KOG2296, Eukaryota |
HOGENOMi | CLU_546474_0_0_1 |
InParanoidi | O94599 |
OMAi | IPNGRSN |
PhylomeDBi | O94599 |
Miscellaneous databases
PROi | PR:O94599 |
Family and domain databases
InterProi | View protein in InterPro IPR006876, LMBR1-like_membr_prot |
Pfami | View protein in Pfam PF04791, LMBR1, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YC8B_SCHPO | |
Accessioni | O94599Primary (citable) accession number: O94599 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 10, 2008 |
Last sequence update: | May 1, 1999 | |
Last modified: | September 29, 2021 | |
This is version 97 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Fungal Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Schizosaccharomyces pombe
Schizosaccharomyces pombe: entries and gene names - SIMILARITY comments
Index of protein domains and families