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Protein

Uncharacterized mitochondrial carrier C12D12.05c

Gene

SPBC12D12.05c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized mitochondrial carrier C12D12.05c
Gene namesi
ORF Names:SPBC12D12.05c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC12D12.05c
PomBaseiSPBC12D12.05c

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei130 – 151Helical; Name=1Sequence analysisAdd BLAST22
Transmembranei193 – 213Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei229 – 249Helical; Name=3Sequence analysisAdd BLAST21
Transmembranei290 – 310Helical; Name=4Sequence analysisAdd BLAST21
Transmembranei336 – 356Helical; Name=5Sequence analysisAdd BLAST21
Transmembranei394 – 415Helical; Name=6Sequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003107911 – 426Uncharacterized mitochondrial carrier C12D12.05cAdd BLAST426

Proteomic databases

MaxQBiO94502
PaxDbiO94502
PRIDEiO94502

Interactioni

Protein-protein interaction databases

STRINGi4896.SPBC12D12.05c.1

Structurei

3D structure databases

ProteinModelPortaliO94502
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati125 – 216Solcar 1Add BLAST92
Repeati226 – 315Solcar 2Add BLAST90
Repeati334 – 422Solcar 3Add BLAST89

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi65 – 108His-richAdd BLAST44

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiO94502
KOiK14684
OrthoDBiEOG092C2RR5
PhylomeDBiO94502

Family and domain databases

Gene3Di1.50.40.10, 1 hit
InterProiView protein in InterPro
IPR002067 Mit_carrier
IPR018108 Mitochondrial_sb/sol_carrier
IPR023395 Mt_carrier_dom_sf
PfamiView protein in Pfam
PF00153 Mito_carr, 3 hits
PRINTSiPR00926 MITOCARRIER
SUPFAMiSSF103506 SSF103506, 1 hit
PROSITEiView protein in PROSITE
PS50920 SOLCAR, 3 hits

Sequencei

Sequence statusi: Complete.

O94502-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTELSDITI QSVLPCDYSL FKNNLRVSRL PESRFVFSPK EEINCQSLLQ
60 70 80 90 100
GPELKTALDN LNFIHKQKFE HQFRHGYWKL HPHPHHQHDS IIPASWIHDT
110 120 130 140 150
PHMKLVFHRL QNLPDGDLLL ENDPKNNVGY FISGGIAGIV SRTCTAPLDR
160 170 180 190 200
LKVMLISDTG SKPSPKYPFA TLLHTTKVLW NRNGIRSFFV GNGINVLKVM
210 220 230 240 250
PESSIKFGTY EAMKRVLGIS SSSENHSPLY SYLAGGMAGS VAQMFIYPVD
260 270 280 290 300
TLKFRIQCSD LSRGQHGKSI ILSNAKELYK SVGIRGYYRG VLVGILGMFP
310 320 330 340 350
YSATDLGTFE GLKRTWIGIL ASRDNVDPQD VKLPNGLVMA FGALSGSTGA
360 370 380 390 400
TIVFPLNVIR TRLQTQGTSA HPATYDGFID CFYKTTKNEG FRGLYKGLSP
410 420
NLLKVAPSVA ISYLVYENCK KWLGLE
Length:426
Mass (Da):47,514
Last modified:May 1, 2000 - v2
Checksum:i2533D8B0F1B2CF78
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAA22679.2
PIRiT39385
RefSeqiNP_595952.1, NM_001021861.2

Genome annotation databases

EnsemblFungiiSPBC12D12.05c.1; SPBC12D12.05c.1:pep; SPBC12D12.05c
GeneIDi2539713
KEGGispo:SPBC12D12.05c

Similar proteinsi

Entry informationi

Entry nameiYBT5_SCHPO
AccessioniPrimary (citable) accession number: O94502
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: May 1, 2000
Last modified: March 28, 2018
This is version 105 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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