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Protein
Submitted name:

CPSF (Cleavage and polyadenylation specific factor), subunit A, putative

Gene

PF3D7_0317700

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
CPSF (Cleavage and polyadenylation specific factor), subunit A, putativeImported
Gene namesi
ORF Names:PF3D7_0317700Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0317700

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

PRIDEiO77380

Structurei

3D structure databases

ProteinModelPortaliO77380
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2526 – 2828CPSF_AInterPro annotationAdd BLAST303

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1064 – 1084Sequence analysisAdd BLAST21
Coiled coili1429 – 1449Sequence analysisAdd BLAST21
Coiled coili2207 – 2229Sequence analysisAdd BLAST23

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoidiO77380
OMAiCQTECQT

Family and domain databases

Gene3Di2.130.10.10, 8 hits
InterProiView protein in InterPro
IPR004871 Cleavage/polyA-sp_fac_asu_C
IPR031297 DDB1
IPR015943 WD40/YVTN_repeat-like_dom_sf
PANTHERiPTHR10644:SF3 PTHR10644:SF3, 2 hits
PfamiView protein in Pfam
PF03178 CPSF_A, 1 hit

Sequencei

Sequence statusi: Complete.

O77380-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSPYHFYNNV IDSKSVRSSV CCNIKGNEKK YLIYACNNHL NVCCIDKNGN
60 70 80 90 100
TDDYSEHVLF AEVLELREYV PEKLVHSTYN KEKVKSYLFV LTRKYVLLLL
110 120 130 140 150
EYDVKENDFI TLSKINLCEL NGLHLEEDVI FLLDERHKTI LFYGYKNILK
160 170 180 190 200
YIYLDYDNFL NLNNVYTMRI DESLIIDIAF LGTHTMGCNK QLRNKQDDDD
210 220 230 240 250
KINYGDNKNN YGDNKNNYGD NNNNYGDYNN NYDDNRSNYD DDKSNYDDDK
260 270 280 290 300
SNYDDDKSNY DDDKSNYDDD KSNYDDDNKY YDRVHKSGNF LCDDIYKNEM
310 320 330 340 350
LFNKEDLFLE HQNIYKKIKK EMSTDDQDDV PLINKTLYSI GNKSCLEIDK
360 370 380 390 400
LLKKKSYDFV GTMNYDNNDC RPNSINKLKV EERGKRNYDV RNCNNFDHIS
410 420 430 440 450
GGLLSQHPNS FESYYPKYNE YNKNIRRMLD GYYNIKGRQQ DDIKLAFHDS
460 470 480 490 500
CNSTYNKNND EYMYSTICIL YDYKKSDTEF YERYIRIIPL CRMNDASIKF
510 520 530 540 550
LGDDNSEFDF YDYSDNDKYY AYKYNKRNRD EDNGKDNHKD NHKDNHKDNH
560 570 580 590 600
KDNHKDNDKD NDRDNLKYKY DNYEYNIYSN NKNINKKNSF VNNILDKGCL
610 620 630 640 650
LPKYYKPLHV DPSINKILCL SKYKILLIGF QFINYINIVK EKRRSFFLSS
660 670 680 690 700
EFRTITYIES INMNKYILSD DYGDLFILSF LPKKKNKDIF DEEDIDVHNN
710 720 730 740 750
MEKKNDKYED DHMKDIQDKH DIEKKNEPYK GRYYDFYCKY GGNDTFMGDI
760 770 780 790 800
SSMRVQFLGT CSRANVITRI YPDIIFLGSQ ISDSYLLRMH YFPIYEREDF
810 820 830 840 850
EPVEYSPYCQ MLKEDETVSK EMNMYDVNKY VEDIWNKNKN VMVPIMNNNS
860 870 880 890 900
RNIPHMENMK SMNNIYNVNN INNIFNFPAD LNNLYNNHYK NKEMHGLGKY
910 920 930 940 950
CMNYNKTYFC TYPYNDNNIG RNKYHRDKND YYTSIINTSQ GDVNYSPNTN
960 970 980 990 1000
YIYDYNEGNK KNKIEKKKFY IEILSVIQNM GPILDMCVVK NKNNEYEIIT
1010 1020 1030 1040 1050
CNSYGRTGCV SIIQSGLKTN ITCDLNFNKL NNFFVVKYVI YLKKKKKNTH
1060 1070 1080 1090 1100
THIHTHATIT NDAMKKENDH KDCIEDNKDK VNKESLNINE NRNNILINDD
1110 1120 1130 1140 1150
EGMMNDVCND DGTNLPRKKQ KTKNKKNKSV SEEPLHFEVF VSLNNKKNIK
1160 1170 1180 1190 1200
IKNINLCFLN KYYFESEKEI NVLKYSNFIY FHIFMICVTY ANQTKIVGVS
1210 1220 1230 1240 1250
RDIFKRRKIK KDSSSETLIN NKDNKFDNGT NHYPDNIMNC FTSDSHNNNN
1260 1270 1280 1290 1300
NNNNNHMFGM QNGRDIQDDK KNNLNNPNFL NEEKKGDMKN KIPSESFLKD
1310 1320 1330 1340 1350
VCNEIFLCEY ENTDIDMYSN TLYFNIIKNH PYLIQICNNH IRLLCCLSLK
1360 1370 1380 1390 1400
LIYNLQVAYV YNYSIYNDYI YIYCKEGIKI YGIIENYIIH IYTYIIKENI
1410 1420 1430 1440 1450
SSWSLYKNLL ACVFNNNEVV IYNINMNTLK EIKEENHKRE REAIDLDINV
1460 1470 1480 1490 1500
EQGKGKKLHH IFNIVNYYKP EMSFFVYISD VELIMMNDNM YLFLGYSHGN
1510 1520 1530 1540 1550
IEYFIMCAYN KKGKKKNMGA ECMCRNDDNK NGDKKEKKMK KKEHKKKSST
1560 1570 1580 1590 1600
FSNNSDYSDN SNNSNNSDYS DYSDYSYGIN NSYEYVPENS NLKNFLIHTD
1610 1620 1630 1640 1650
YKGLVRKRKE CNTLFKLHKE YLKRKELILK YIYKVCKDNV CNEDTGSRCK
1660 1670 1680 1690 1700
YTYKLNMRKD LKKEKKIKKR KRNVLKYLSQ YNMNVFDFFD FDKISFNNMN
1710 1720 1730 1740 1750
ELYKICNRSK DDVIYIDNEY YYNVNIESDN FVSLQKFLES DNEINKMDTG
1760 1770 1780 1790 1800
SAVVDVASDD MIGSSCNNNI KENVGDNIKE NVGDNIKENV GDNIKENVGD
1810 1820 1830 1840 1850
NIKENVGDNI KENVGDNIKE NVGDNIKEYV GDNIKENVGD NIKENVGDNI
1860 1870 1880 1890 1900
KENVGDNIKE NVGDNIKENV GDNIKENVGD NIKENVGDNI KENVGDNDNV
1910 1920 1930 1940 1950
SNNSYTNYSN SNTYDISHAY NNNCSDKNTL HFSQNNKGKK KGMIKNSNSV
1960 1970 1980 1990 2000
KCNVKKEVDN NNNNNNNKKI LVKGEKNVKI HHKRARYFFN FFQVYGILSE
2010 2020 2030 2040 2050
ESSDYDSSVD IMTFKRSIKP KEKYNDDTYI HRKKNHRKRI VYNTEGTIFD
2060 2070 2080 2090 2100
ELHYGTLSPP SLYIHKYNKS IDKFSHYINK YSISDDDMLS SYDDNDDEVN
2110 2120 2130 2140 2150
PLDVQDTRKN KKNKIKKKNI KYIKNIKYIK NIKNIKNNKT HRKAGRQKRD
2160 2170 2180 2190 2200
ESITSTDSSS IYNSKMDECY QYDDDDDDDD DDNENFEEES QGDDHIFEQN
2210 2220 2230 2240 2250
NILRTFIKNE NKNKNIKKKN NNNKKKKASN DNMNVFNNTS NVNHNDIKKR
2260 2270 2280 2290 2300
KRDIKNLLYK KLKRQCKDIY LQENCKSDCS KYCNSNNMSS EIPSSFDNLN
2310 2320 2330 2340 2350
NILFDEKIFL KNNILKSEKI FLINKRKINV CNDTIKFKKF VKVFSEKKKI
2360 2370 2380 2390 2400
DINQSNIIKK YNFLFVCCES PIIIYSDLKK KINVSKLSLK NIYIVDIFND
2410 2420 2430 2440 2450
FNYLNPFHNF LSFKKKNQNN FYFIFYDGSN IHISPLNQIK KTFLKKIPFH
2460 2470 2480 2490 2500
RTVEKIAYHS DTGLLIAACP SEEKHKTNEM MKQIICFFDP YHDSIKYTYI
2510 2520 2530 2540 2550
IPSKYTVSTI IIYDNEKLMK SNFDVTSFIF VGTCNSNEKY TEPTSGHIHI
2560 2570 2580 2590 2600
FIAKKKANIF EIKHIYTHNI NYGGVTNLVP YDDKIVATIN NMVVILDINN
2610 2620 2630 2640 2650
LIIKYEAFMD PQNLQPKIEG NNAIVELVSF TPSSWIMTVD VYGDYIVVGD
2660 2670 2680 2690 2700
IMTSVTILQY DYENSQLFEV CRDYSNIWCT SLCALSKSHI VVSDMDANFI
2710 2720 2730 2740 2750
ILQKSKFKYN DEDSYKLSSV SLFNHGSIIN KMLPLSNTNL IEEDYDKRNI
2760 2770 2780 2790 2800
LTKNDGILCA SSEGSISVLI PFSSFANFKK ALCIEIAITD NISSIGNLSH
2810 2820 2830 2840 2850
NAYREYKVNF RSKHCKGIVD GELLKMFFHM SFEKQYKTFI YAKWIAKKIN
2860 2870
CKFGSFNNFI LDLENMCSFL
Length:2,870
Mass (Da):338,532
Last modified:October 1, 2000 - v2
Checksum:iF808CCDA52E31335
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844502 Genomic DNA Translation: CAB11136.2
PIRiT18497
RefSeqiXP_001351247.1, XM_001351211.1

Genome annotation databases

EnsemblProtistsiCAB11136; CAB11136; PF3D7_0317700
GeneDBiPF3D7_0317700.1:pep
GeneIDi814491
KEGGipfa:PF3D7_0317700

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844502 Genomic DNA Translation: CAB11136.2
PIRiT18497
RefSeqiXP_001351247.1, XM_001351211.1

3D structure databases

ProteinModelPortaliO77380
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiO77380

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiCAB11136; CAB11136; PF3D7_0317700
GeneDBiPF3D7_0317700.1:pep
GeneIDi814491
KEGGipfa:PF3D7_0317700

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0317700

Phylogenomic databases

InParanoidiO77380
OMAiCQTECQT

Family and domain databases

Gene3Di2.130.10.10, 8 hits
InterProiView protein in InterPro
IPR004871 Cleavage/polyA-sp_fac_asu_C
IPR031297 DDB1
IPR015943 WD40/YVTN_repeat-like_dom_sf
PANTHERiPTHR10644:SF3 PTHR10644:SF3, 2 hits
PfamiView protein in Pfam
PF03178 CPSF_A, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiO77380_PLAF7
AccessioniPrimary (citable) accession number: O77380
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: October 1, 2000
Last modified: September 12, 2018
This is version 93 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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