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Protein

40S ribosomal protein S12-B

Gene

rps1202

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for S12 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-SPO-1799339 SRP-dependent cotranslational protein targeting to membrane
R-SPO-72689 Formation of a pool of free 40S subunits
R-SPO-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-SPO-72702 Ribosomal scanning and start codon recognition
R-SPO-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-SPO-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-SPO-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S12-B
Gene namesi
Name:rps1202
Synonyms:rps12b
ORF Names:SPBC1685.02c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC1685.02c
PomBaseiSPBC1685.02c rps1202

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001223391 – 14840S ribosomal protein S12-BAdd BLAST148

Proteomic databases

MaxQBiO74322
PaxDbiO74322
PRIDEiO74322

PTM databases

iPTMnetiO74322

Interactioni

Protein-protein interaction databases

BioGridi276559, 14 interactors
STRINGi4896.SPBC1685.02c.1

Structurei

3D structure databases

ProteinModelPortaliO74322
SMRiO74322
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000210688
InParanoidiO74322
KOiK02951
OMAiGLRECAK
OrthoDBiEOG092C5G05
PhylomeDBiO74322

Family and domain databases

Gene3Di3.30.1330.30, 1 hit
InterProiView protein in InterPro
IPR029064 L30e-like
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45
IPR000530 Ribosomal_S12e
PANTHERiPTHR11843 PTHR11843, 1 hit
PfamiView protein in Pfam
PF01248 Ribosomal_L7Ae, 1 hit
PRINTSiPR00972 RIBSOMALS12E
SUPFAMiSSF55315 SSF55315, 1 hit
PROSITEiView protein in PROSITE
PS01189 RIBOSOMAL_S12E, 1 hit

Sequencei

Sequence statusi: Complete.

O74322-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTEGDHVPQ AEEVIETVEV VEEETGSSPL SVEDSLKEVL KRALVHDGLA
60 70 80 90 100
RGIREASKAL DRRQAHLCVL CESCDQEAYV KLVEALCAES QTPLVKVADP
110 120 130 140
KILGEWAGLC VLDRDGNARK VVGCSCVAVT DYGEDSVALQ TLLSSFAA
Length:148
Mass (Da):15,871
Last modified:November 1, 1998 - v1
Checksum:iE90762E864C1B501
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAA20050.1
PIRiT39518
RefSeqiNP_595206.1, NM_001021112.2

Genome annotation databases

EnsemblFungiiSPBC1685.02c.1; SPBC1685.02c.1:pep; SPBC1685.02c
GeneIDi2540015
KEGGispo:SPBC1685.02c

Similar proteinsi

Entry informationi

Entry nameiRS12B_SCHPO
AccessioniPrimary (citable) accession number: O74322
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 8, 2000
Last sequence update: November 1, 1998
Last modified: May 23, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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