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Protein

Insulin-like growth factor 1 receptor

Gene

igf1r

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

This receptor binds insulin-like growth factor 1 (IGF1) with a high affinity and IGF2 with a lower affinity. It has a tyrosine-protein kinase activity, which is necessary for the activation of the IGF1-stimulated downstream signaling cascade. Plays a role in oocyte maturation. Promotes head development by inhibiting Wnt signaling during embryogenesis.3 Publications

Catalytic activityi

ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate.PROSITE-ProRule annotation1 Publication

Cofactori

Mn2+By similarity

Activity regulationi

Autophosphorylation activates the kinase activity.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei1029ATPPROSITE-ProRule annotationBy similarity1
Active sitei1131Proton acceptorPROSITE-ProRule annotationBy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi1001 – 1009ATPPROSITE-ProRule annotationBy similarity9

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental protein, Kinase, Receptor, Transferase, Tyrosine-protein kinase
LigandATP-binding, Manganese, Metal-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Insulin-like growth factor 1 receptor (EC:2.7.10.1)
Short name:
xIGF-1R
Short name:
xIGFR
Cleaved into the following 2 chains:
Gene namesi
Name:igf1r
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-865040 igf1r

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini735 – 934ExtracellularSequence analysisAdd BLAST200
Transmembranei935 – 955HelicalSequence analysisAdd BLAST21
Topological domaini956 – 1358CytoplasmicSequence analysisAdd BLAST403

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_000004574926 – 730Insulin-like growth factor 1 receptor alpha chain1 PublicationAdd BLAST705
ChainiPRO_0000045750735 – 1358Insulin-like growth factor 1 receptor beta chain1 PublicationAdd BLAST624

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi74N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi99N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi132N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi212 ↔ 221By similarity
Disulfide bondi216 ↔ 227By similarity
Disulfide bondi228 ↔ 236By similarity
Disulfide bondi232 ↔ 245By similarity
Glycosylationi241N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi248 ↔ 257By similarity
Disulfide bondi261 ↔ 273By similarity
Disulfide bondi279 ↔ 299By similarity
Disulfide bondi303 ↔ 317By similarity
Glycosylationi310N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi320 ↔ 324By similarity
Glycosylationi411N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi432N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi488N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi528N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi616N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi634N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi669N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi741N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi750N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi758N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi895N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi908N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei976Phosphotyrosine; by autocatalysisBy similarity1
Modified residuei1157Phosphotyrosine; by autocatalysisBy similarity1
Modified residuei1161Phosphotyrosine; by autocatalysisBy similarity1
Modified residuei1162Phosphotyrosine; by autocatalysisBy similarity1

Post-translational modificationi

The cytoplasmic domain of the beta subunit is autophosphorylated on Tyr residues in response to low concentrations of insulin-like growth factor (IGF 1) and higher concentrations of insulin.

Keywords - PTMi

Cleavage on pair of basic residues, Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PRIDEiO73798

Expressioni

Developmental stagei

Expressed both maternally and zygotically. Shows biphasic expression during early development. Expressed ubiquitously in fertilized eggs and throughout the midblastula transition. Expression then decreases at mid-gastrulation. Shortly after gastrulation, expression is seen throughout the dorsal side of the embryo with expression strongest in the anterior and absent ventrally. Expression increases along the dorsal midline at early neurulation and is seen in the head region as neurulation progresses, particularly in the area of the cement gland primordium. Also present in the anterior mesoderm but is absent from the neural tube and the most ventral part of the embryo. Remains expressed throughout early embryogenesis. By the tailbud stages, expression is anterior, in the head and the most rostral part of the neural tube.3 Publications

Interactioni

Subunit structurei

Tetramer of 2 alpha and 2 beta chains linked by disulfide bonds. The alpha chains contribute to the formation of the ligand-binding domain, while the beta chain carries the kinase domain (By similarity).By similarity

Binary interactionsi

WithEntry#Exp.IntActNotes
gipc2Q5HZ832EBI-8068109,EBI-8068143

GO - Molecular functioni

Protein-protein interaction databases

IntActiO73798, 1 interactor
MINTiO73798

Structurei

3D structure databases

ProteinModelPortaliO73798
SMRiO73798
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini483 – 603Fibronectin type-III 1PROSITE-ProRule annotationAdd BLAST121
Domaini604 – 702Fibronectin type-III 2PROSITE-ProRule annotationAdd BLAST99
Domaini727 – 818Fibronectin type-III 3PROSITE-ProRule annotationAdd BLAST92
Domaini829 – 924Fibronectin type-III 4PROSITE-ProRule annotationAdd BLAST96
Domaini995 – 1270Protein kinasePROSITE-ProRule annotationAdd BLAST276

Sequence similaritiesi

Belongs to the protein kinase superfamily. Tyr protein kinase family. Insulin receptor subfamily.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

HOVERGENiHBG006134
KOiK05087

Family and domain databases

CDDicd00063 FN3, 3 hits
cd00064 FU, 1 hit
Gene3Di2.60.40.10, 2 hits
3.80.20.20, 2 hits
InterProiView protein in InterPro
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR006211 Furin-like_Cys-rich_dom
IPR006212 Furin_repeat
IPR009030 Growth_fac_rcpt_cys_sf
IPR013783 Ig-like_fold
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR000494 Rcpt_L-dom
IPR036941 Rcpt_L-dom_sf
IPR001245 Ser-Thr/Tyr_kinase_cat_dom
IPR008266 Tyr_kinase_AS
IPR020635 Tyr_kinase_cat_dom
IPR016246 Tyr_kinase_insulin-like_rcpt
IPR002011 Tyr_kinase_rcpt_2_CS
PfamiView protein in Pfam
PF00757 Furin-like, 1 hit
PF07714 Pkinase_Tyr, 1 hit
PF01030 Recep_L_domain, 2 hits
PIRSFiPIRSF000620 Insulin_receptor, 1 hit
PRINTSiPR00109 TYRKINASE
SMARTiView protein in SMART
SM00060 FN3, 3 hits
SM00261 FU, 1 hit
SM00219 TyrKc, 1 hit
SUPFAMiSSF49265 SSF49265, 3 hits
SSF56112 SSF56112, 1 hit
SSF57184 SSF57184, 1 hit
PROSITEiView protein in PROSITE
PS50853 FN3, 3 hits
PS00107 PROTEIN_KINASE_ATP, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00109 PROTEIN_KINASE_TYR, 1 hit
PS00239 RECEPTOR_TYR_KIN_II, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O73798-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKAELVPVCT AWILGLLLCL GPAAAKVCGP NMDIRNDVSE LKQLRDCVVI
60 70 80 90 100
EGYLQILLIS NAKAEDFRNL RFPNLTVITD YLLLFRVSGL VSLSNLFPNL
110 120 130 140 150
TVIRGRVLFY NYALVIFEMT DLKEIGLYNL RNITRGAVRI EKNSELCYVS
160 170 180 190 200
TVDWSLVLDA VYNNYIVGNK PPKECVDLCP GAREKMQICE KSSINNEFAD
210 220 230 240 250
RCWSDEHCQK VCPSVCGKRA CSDNNECCHP ECLGSCTAPD NDTACVACHH
260 270 280 290 300
YFYEGRCVPT CPSNTYKFEG WRCITREVCA KMHIWIHSTI PFIIHKGECV
310 320 330 340 350
YECPSGYMLN KSQSMTCSPC EGPCPKICEE KMKTIDSVTS AQMLEGCTVL
360 370 380 390 400
KGNLQLNIRK GQNIAAELEN FLGLIETVTG YVKIRHSHAL VSLSFLKSLR
410 420 430 440 450
YILGEEQMPG NYSFYVFDNN NLQQLWDWSK HNLTIKEGKI RFAFNSKLCA
460 470 480 490 500
SEIYRMEEVT GTKGRQAEED ISLSTNGNMA SCESHVLNFT SRSKIKNRIK
510 520 530 540 550
LTWERYRPPD YRDLISFTVY YKEAPFRNVT EYDGQDACGS NSWNMVDVDL
560 570 580 590 600
PASKESDPGI LLQGLKPWTQ YAIYVKAITL TMLENRHIHG AKSKIIYMRT
610 620 630 640 650
DAAVPSIPQD MISASNSSSQ LVVKWNPPSL PNGNLSYYIV RWQQQPQDRH
660 670 680 690 700
LYQYNYCFKD KVPNRKYANG TIDTEGGTEP TKPEGSVGEK GHYCACPKTE
710 720 730 740 750
AEEKAEKDEA EYRKVFENFL HNSIFVPRPN RRRRDVLAVG NSTVTSYEKN
760 770 780 790 800
STTEDFSNFS DSERDDIEYP FYETKVDYKW ERTVISNLQP FTLYRIDIHS
810 820 830 840 850
CNHEAEKLGC SASNFVFART MPAAGADDIP GIVNTKEEDD GVIFLGWPEP
860 870 880 890 900
LRPNGLILMY EIEYKHQGEV HRECVSRQDY RKNGGIKLVR LPPGNYSAQV
910 920 930 940 950
QAISLYGNGS WTEMVSFCVK LKPDVRNNIL QMVVAIPLAL SFLLVGIISI
960 970 980 990 1000
VCFVFKKRNS NRLGNGVLYA SVNPEYFSAA EMYVPDKWEV PREKITMNRE
1010 1020 1030 1040 1050
LGQGSFGMVY EGIAKGVVKD EAETKVAIKT VNEAASMRER IEFLNEASVM
1060 1070 1080 1090 1100
KEFNCHHVVR LLGVVSQGQP TLVIMELMTR GDLKSYLRSL RPDTESNSGQ
1110 1120 1130 1140 1150
PTPSLKKMIQ MAGEIADGMS YLNANKFVHR DLAARNCMVT EDFTVKIGDF
1160 1170 1180 1190 1200
GMTRDIYETD YYRKGGKGLL PVRWMSPESL KDGVFTTNSD VWSFGVVLWE
1210 1220 1230 1240 1250
IATLAEQPYQ GMSNEQVLRF VMEGGLLEKP DNCPDMLFEL MRMCWQFNPK
1260 1270 1280 1290 1300
MRPSFLEIIS SIKDELDPGF KEVSFFYSEE NKPPDTEELD LEAENMESIP
1310 1320 1330 1340 1350
LDPSCALQNS EHHAGHKSEN GPGVVVLRAS FDERQPYAHM NGGRKNERAL

PLPQSSAC
Length:1,358
Mass (Da):153,864
Last modified:August 1, 1998 - v1
Checksum:i2E4E1F8EA6696776
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF055980 mRNA Translation: AAC12942.1
RefSeqiNP_001081734.1, NM_001088265.1
UniGeneiXl.269

Genome annotation databases

GeneIDi398022
KEGGixla:398022

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF055980 mRNA Translation: AAC12942.1
RefSeqiNP_001081734.1, NM_001088265.1
UniGeneiXl.269

3D structure databases

ProteinModelPortaliO73798
SMRiO73798
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO73798, 1 interactor
MINTiO73798

Proteomic databases

PRIDEiO73798

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi398022
KEGGixla:398022

Organism-specific databases

CTDi398022
XenbaseiXB-GENE-865040 igf1r

Phylogenomic databases

HOVERGENiHBG006134
KOiK05087

Family and domain databases

CDDicd00063 FN3, 3 hits
cd00064 FU, 1 hit
Gene3Di2.60.40.10, 2 hits
3.80.20.20, 2 hits
InterProiView protein in InterPro
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR006211 Furin-like_Cys-rich_dom
IPR006212 Furin_repeat
IPR009030 Growth_fac_rcpt_cys_sf
IPR013783 Ig-like_fold
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR000494 Rcpt_L-dom
IPR036941 Rcpt_L-dom_sf
IPR001245 Ser-Thr/Tyr_kinase_cat_dom
IPR008266 Tyr_kinase_AS
IPR020635 Tyr_kinase_cat_dom
IPR016246 Tyr_kinase_insulin-like_rcpt
IPR002011 Tyr_kinase_rcpt_2_CS
PfamiView protein in Pfam
PF00757 Furin-like, 1 hit
PF07714 Pkinase_Tyr, 1 hit
PF01030 Recep_L_domain, 2 hits
PIRSFiPIRSF000620 Insulin_receptor, 1 hit
PRINTSiPR00109 TYRKINASE
SMARTiView protein in SMART
SM00060 FN3, 3 hits
SM00261 FU, 1 hit
SM00219 TyrKc, 1 hit
SUPFAMiSSF49265 SSF49265, 3 hits
SSF56112 SSF56112, 1 hit
SSF57184 SSF57184, 1 hit
PROSITEiView protein in PROSITE
PS50853 FN3, 3 hits
PS00107 PROTEIN_KINASE_ATP, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00109 PROTEIN_KINASE_TYR, 1 hit
PS00239 RECEPTOR_TYR_KIN_II, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiIGF1R_XENLA
AccessioniPrimary (citable) accession number: O73798
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: August 1, 1998
Last modified: November 7, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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