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Entry version 76 (29 Sep 2021)
Sequence version 1 (01 Aug 1998)
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Protein
Submitted name:

Surface layer protein

Gene

sbsC

Organism
Geobacillus stearothermophilus (Bacillus stearothermophilus)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi659Calcium 1Combined sources1
Metal bindingi659Calcium 2Combined sources1
Metal bindingi660Calcium 1Combined sources1
Metal bindingi660Calcium 2Combined sources1
Metal bindingi662Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi662Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi664Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi666Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi669Calcium 3Combined sources1
Metal bindingi673Calcium 1Combined sources1
Metal bindingi673Calcium 2Combined sources1
Metal bindingi674Calcium 3Combined sources1
Metal bindingi675Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi702Calcium 4Combined sources1
Metal bindingi705Calcium 4Combined sources1
Metal bindingi707Calcium 4Combined sources1
Metal bindingi709Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi737Calcium 4Combined sources1
Metal bindingi802Calcium 5Combined sources1
Metal bindingi803Calcium 5; via amide nitrogen and carbonyl oxygenCombined sources1
Metal bindingi806Calcium 5Combined sources1
Metal bindingi809Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi811Calcium 5Combined sources1
Metal bindingi884Zinc 1Combined sources1
Metal bindingi892Calcium 6Combined sources1
Metal bindingi922Zinc 2Combined sources1
Metal bindingi979Calcium 6Combined sources1
Metal bindingi1020Zinc 2; via tele nitrogenCombined sources1
Metal bindingi1068Zinc 1; via tele nitrogenCombined sources1
Metal bindingi1076Zinc 2Combined sources1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandCalciumCombined sources, Metal-bindingCombined sources, ZincCombined sources

Protein family/group databases

Transport Classification Database

More...
TCDBi
9.B.324.3.1, the pore-forming s-layer protein (s-layer) family

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Surface layer proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:sbsCImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiGeobacillus stearothermophilus (Bacillus stearothermophilus)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1422 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 30Sequence analysisAdd BLAST30
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500415958831 – 1099Sequence analysisAdd BLAST1069

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

O68840
With#Exp.IntAct
itself2EBI-15719658,EBI-15719658

GO - Molecular functioni

Protein-protein interaction databases

Database of interacting proteins

More...
DIPi
DIP-46031N

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
O68840

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...
EvolutionaryTracei
O68840

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini472 – 548BIG2InterPro annotationAdd BLAST77
Domaini554 – 643BIG2InterPro annotationAdd BLAST90
Domaini657 – 737BIG2InterPro annotationAdd BLAST81

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili134 – 154Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysisARBA annotation

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 1 hit
2.60.40.1220, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003343, Big_2
IPR014755, Cu-Rt/internalin_Ig-like
IPR013783, Ig-like_fold
IPR041378, S-layer_SbsC_C
IPR032812, SbsA_Ig
IPR040751, SbsC_C

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13205, Big_5, 1 hit
PF18316, S-l_SbsC_C, 2 hits
PF18058, SbsC_C, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00635, BID_2, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

O68840-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDKKKAVKLA TASAVAASAF VAANPHASQA ATDVATVVSQ AKAQMKEAYY
60 70 80 90 100
TYSHTVTETG QFPDIKDVYA AYNKAKQAYA NAVAVVNKAG GAKKDAYLAD
110 120 130 140 150
LQAIYETYVF KANPKSGEAR VATYIDAYNY ATKLDKMRQE LKAAVDAKDL
160 170 180 190 200
KKAEELYHKI SYELKTRTVI LDRVYGQSTR ELLRSTFKAD AQALRDRLIY
210 220 230 240 250
DITVAMKARE AQDAVKAGNL DKAKAALDQV NQYVSKVTDA FKAELQKAAQ
260 270 280 290 300
DAKAAYEAAL TPKVESVSAI DSTSFKVTFT KPVDKATAIP KNFSITLKGT
310 320 330 340 350
ETKLYPKSVE VSESGLTATV TLYDTLVDGK TYTVVTSGLK DTAGKEFETS
360 370 380 390 400
TNEFTYNKPV PASITFNFNK LPEDSAVDLT KYVTVKDAAG NVIKSGFELE
410 420 430 440 450
FTSSEKLTQG KFINTTGKKS VIVNATVKGT NVTTGNVILA VEDEKAAEVS
460 470 480 490 500
ELKLTKDNKE VVTLYANGNA FDKDGNQISS GTLTLTAKFK DQYGNELTGK
510 520 530 540 550
VAGTDYTFES LNPEVLVVAP DGSVTPIVPG TALVKVKYGE VTKTIPVTVK
560 570 580 590 600
ANPVLETIAV DSTGVSVAKG QKATFKVTLK DQYGNKFTGN VNVTSDKTET
610 620 630 640 650
ATVSVSNSGI GQSEYTVTVN GVAEGSTTIT IKSGTKEVKV PVNVVAGGPV
660 670 680 690 700
ANYQIKVLDD GKIDKSATES PANNDVQLKV YAVDANGNIV GDITNDVTIT
710 720 730 740 750
SEATDTNGVI VNASKSTANG DTVYVITDNG SKKVGKETLT VKLGTVTLGT
760 770 780 790 800
VDVEVIDTTL KATVVTKKAD LIELDAADNG DALAKLLANL DIKDQNGNPM
810 820 830 840 850
VDSAATPNTN EKLQALKSVL SGIVSSDTSV IGSVSNVDNL KDDASISGLA
860 870 880 890 900
VKKAGTVTLT LVFNEDSKIA PIAITVKAPA ATQDGVTVTG LDLVPGVTGV
910 920 930 940 950
GKTKFTATDK IKSGHKLYYA VDDSAVPAPA VGTTRNSTKF ANEITVGTTE
960 970 980 990 1000
VAANAGQIIT VIEVDSSDRV VGYKTFTVEA ADLSVAADKT GFTATVTPTG
1010 1020 1030 1040 1050
GNQVTTGKTL LAVSDLANGH KLYAAAAGSS AAAAPVKGIA YTDTTVRTTY
1060 1070 1080 1090
GTEVTSGTVE VDAQDGQHIS IIEVDENGKV VGYKDYTITG IQIGTKSAS
Length:1,099
Mass (Da):115,395
Last modified:August 1, 1998 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i7330F156334ABBAA
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF055578 Genomic DNA Translation: AAC12757.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T14850

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF055578 Genomic DNA Translation: AAC12757.1
PIRiT14850

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2RA1X-ray2.41A32-443[»]
4UICX-ray2.90A31-844[»]
4UIDX-ray2.80A/B443-650[»]
4UIEX-ray3.10A754-1099[»]
4UJ6X-ray3.40A31-790[»]
4UJ7X-ray1.54A541-759[»]
4UJ8X-ray1.70A/B/C/D642-882[»]
5FTXX-ray4.10A447-1099[»]
5FTYX-ray2.60A/B642-882[»]
SMRiO68840
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

DIPiDIP-46031N

Protein family/group databases

TCDBi9.B.324.3.1, the pore-forming s-layer protein (s-layer) family

Miscellaneous databases

EvolutionaryTraceiO68840

Family and domain databases

Gene3Di2.60.40.10, 1 hit
2.60.40.1220, 1 hit
InterProiView protein in InterPro
IPR003343, Big_2
IPR014755, Cu-Rt/internalin_Ig-like
IPR013783, Ig-like_fold
IPR041378, S-layer_SbsC_C
IPR032812, SbsA_Ig
IPR040751, SbsC_C
PfamiView protein in Pfam
PF13205, Big_5, 1 hit
PF18316, S-l_SbsC_C, 2 hits
PF18058, SbsC_C, 1 hit
SMARTiView protein in SMART
SM00635, BID_2, 3 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiO68840_GEOSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O68840
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: September 29, 2021
This is version 76 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources
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