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Protein

Endoglucanase 13

Gene

At2g44550

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei412PROSITE-ProRule annotation1
Active sitei464PROSITE-ProRule annotation1
Active sitei473PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Enzyme and pathway databases

BioCyciARA:AT2G44550-MONOMER

Protein family/group databases

CAZyiGH9 Glycoside Hydrolase Family 9

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 13 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 13
Gene namesi
Ordered Locus Names:At2g44550
ORF Names:F4I1.55
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G44550
TAIRilocus:2042441 AT2G44550

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_000024926527 – 490Endoglucanase 13Add BLAST464

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi6N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiO64890

Expressioni

Gene expression databases

ExpressionAtlasiO64890 differential
GenevisibleiO64890 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G44550.1

Structurei

3D structure databases

ProteinModelPortaliO64890
SMRiO64890
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IKVV Eukaryota
ENOG410XPC9 LUCA
HOGENOMiHOG000021033
InParanoidiO64890
OMAiDEQHPGA
OrthoDBiEOG093607Q1
PhylomeDBiO64890

Family and domain databases

Gene3Di1.50.10.10, 1 hit
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR001701 Glyco_hydro_9
IPR018221 Glyco_hydro_9_His_AS
PfamiView protein in Pfam
PF00759 Glyco_hydro_9, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
PROSITEiView protein in PROSITE
PS00592 GLYCOSYL_HYDROL_F9_1, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O64890-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS
60 70 80 90 100
GKLPPNQRVT WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
110 120 130 140 150
LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN
160 170 180 190 200
SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
210 220 230 240 250
AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW
260 270 280 290 300
LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
310 320 330 340 350
SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF
360 370 380 390 400
VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
410 420 430 440 450
VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG
460 470 480 490
AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF
Length:490
Mass (Da):53,448
Last modified:August 1, 1998 - v1
Checksum:i70A6A9155FAFFC08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC003672 Genomic DNA Translation: AAC27457.1
AC004521 Genomic DNA Translation: AAM14964.1
CP002685 Genomic DNA Translation: AEC10437.1
PIRiT02411
RefSeqiNP_181983.1, NM_130019.1
UniGeneiAt.53122

Genome annotation databases

EnsemblPlantsiAT2G44550.1; AT2G44550.1; AT2G44550
GeneIDi819063
GrameneiAT2G44550.1; AT2G44550.1; AT2G44550
KEGGiath:AT2G44550

Similar proteinsi

Entry informationi

Entry nameiGUN13_ARATH
AccessioniPrimary (citable) accession number: O64890
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: August 1, 1998
Last modified: May 23, 2018
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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