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Protein

E3 ubiquitin-protein ligase ATL9

Gene

ATL9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro. May be involved in the early steps of the plant defense signaling pathway.2 Publications

Catalytic activityi

S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6-ubiquitinyl-[acceptor protein]-L-lysine.1 Publication

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri135 – 177RING-type; atypicalPROSITE-ProRule annotationAdd BLAST43

GO - Molecular functioni

GO - Biological processi

  • defense response to fungus Source: TAIR
  • proteasome-mediated ubiquitin-dependent protein catabolic process Source: GO_Central
  • protein ubiquitination Source: UniProtKB
  • response to chitin Source: TAIR

Keywordsi

Molecular functionTransferase
Biological processPlant defense, Ubl conjugation pathway
LigandMetal-binding, Zinc

Enzyme and pathway databases

UniPathwayiUPA00143

Names & Taxonomyi

Protein namesi
Recommended name:
E3 ubiquitin-protein ligase ATL9 (EC:2.3.2.271 Publication)
Alternative name(s):
RING-H2 finger protein ATL9
RING-type E3 ubiquitin transferase ATL9Curated
Gene namesi
Name:ATL9
Ordered Locus Names:At2g35000
ORF Names:F19I3.23
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G35000
TAIRilocus:2044757 AT2G35000

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei51 – 71HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Disruption phenotypei

Susceptibility to powdery mildew pathogen E.cichoracearum.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 33Sequence analysisAdd BLAST33
ChainiPRO_000003070634 – 378E3 ubiquitin-protein ligase ATL9Add BLAST345

Proteomic databases

PaxDbiO64763

PTM databases

iPTMnetiO64763

Expressioni

Inductioni

Up-regulated by chitin elicitors.1 Publication

Gene expression databases

ExpressionAtlasiO64763 baseline and differential
GenevisibleiO64763 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G35000.1

Structurei

3D structure databases

ProteinModelPortaliO64763
SMRiO64763
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domaini

The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.By similarity

Sequence similaritiesi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri135 – 177RING-type; atypicalPROSITE-ProRule annotationAdd BLAST43

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix, Zinc-finger

Phylogenomic databases

eggNOGiKOG0800 Eukaryota
ENOG41121N2 LUCA
HOGENOMiHOG000239182
InParanoidiO64763
KOiK10664
OMAiKSILECA
OrthoDBiEOG09360IB9
PhylomeDBiO64763

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF13639 zf-RING_2, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O64763-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAILDTKSSR WIPHNLLFLL LLLLLQSVPY GFGQTQTTPP GTTKTKPNDP
60 70 80 90 100
VVVVITVLFL VIFFMVFGSI FCRRSNAQFS RSSIFRSTDA DAESQVVRIR
110 120 130 140 150
RLTARGLDAE AIETFPTFLY SEVKAVRIGK GGVECAVCLC EFEDDETLRL
160 170 180 190 200
MPPCCHVFHA DCVDVWLSEH STCPLCRADL VLNQQGDDDD STESYSGTDP
210 220 230 240 250
GTISSSTDPE RGMVLESSDA HLLDAVTWSN SNITPRSKST GLSSWQITGI
260 270 280 290 300
LFPRSHSTGH SLIQPAGNLD RFTLRLPDDV RRQLMKTSRT MGHVALLPQA
310 320 330 340 350
RSSRSGYRSG SVGSERSAFP YGRKSNNNNR RLHSLSFSFS FRSGSVRSTF
360 370
SGDAPKNLPT SIEAGERSFE RLRPDERV
Length:378
Mass (Da):41,880
Last modified:August 1, 1998 - v1
Checksum:i7FEEC36D6BCDBDC6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ059110 mRNA Translation: AAY57596.1
AC004238 Genomic DNA Translation: AAC12839.1
CP002685 Genomic DNA Translation: AEC09047.1
BT015733 mRNA Translation: AAU84670.1
BT020192 mRNA Translation: AAV43794.1
AK228813 mRNA Translation: BAF00709.1
PIRiT00481
RefSeqiNP_181045.1, NM_129052.3
UniGeneiAt.37726

Genome annotation databases

EnsemblPlantsiAT2G35000.1; AT2G35000.1; AT2G35000
GeneIDi818064
GrameneiAT2G35000.1; AT2G35000.1; AT2G35000
KEGGiath:AT2G35000

Similar proteinsi

Entry informationi

Entry nameiATL9_ARATH
AccessioniPrimary (citable) accession number: O64763
Secondary accession number(s): Q4TU26
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 5, 2005
Last sequence update: August 1, 1998
Last modified: April 25, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

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