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Entry version 133 (18 Sep 2019)
Sequence version 1 (01 Aug 1998)
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Protein

Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial

Gene

STR1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.5 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Function’ section describes biophysical and chemical properties, such as maximal absorption, kinetic parameters, pH dependence, redox potentials and temperature dependence.<p><a href='/help/biophysicochemical_properties' target='_top'>More...</a></p>Kineticsi

  1. KM=0.25 mM for thiosulfate3 Publications
  2. KM=0.7 mM for thiosulfate3 Publications
  3. KM=1.7 mM for thiosulfate3 Publications
  4. KM=3.4 mM for 3-mercaptopyruvate3 Publications
  5. KM=3.7 mM for 3-mercaptopyruvate3 Publications
  6. KM=11 mM for sodium mercaptopyruvate3 Publications

    Sites

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei333Cysteine persulfide intermediatePROSITE-ProRule annotation1

    <p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

    GO - Biological processi

    • embryo development ending in seed dormancy Source: UniProtKB
    • transsulfuration Source: GO_Central

    <p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

    Molecular functionTransferase
    LigandPyruvate

    Enzyme and pathway databases

    BioCyc Collection of Pathway/Genome Databases

    More...
    BioCyci
    ARA:AT1G79230-MONOMER

    SABIO-RK: Biochemical Reaction Kinetics Database

    More...
    SABIO-RKi
    O64530

    <p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

    <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
    Recommended name:
    Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial (EC:2.8.1.14 Publications, EC:2.8.1.24 Publications)
    Alternative name(s):
    AtMST1
    Rhodanese homolog protein 1
    Short name:
    AtRDH1
    Sulfurtransferase 1
    Short name:
    AtStr1
    <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
    Name:STR1
    Synonyms:MST1, RDH1, ST1
    Ordered Locus Names:At1g79230
    ORF Names:YUP8H12R.17
    <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
    <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
    <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    <p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
    • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

    Organism-specific databases

    Arabidopsis Information Portal

    More...
    Araporti
    AT1G79230

    The Arabidopsis Information Resource

    More...
    TAIRi
    locus:2207345 AT1G79230

    <p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

    Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

    Keywords - Cellular componenti

    Mitochondrion

    <p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

    <p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

    Shrunken seeds with unmature embryos.1 Publication

    Mutagenesis

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi152C → A: Slight reduction of sulfurtransferase activity. 1 Publication1
    Mutagenesisi295C → N: Slight reduction of sulfurtransferase activity. 1 Publication1
    Mutagenesisi305C → E: Slight reduction of sulfurtransferase activity. 1 Publication1
    Mutagenesisi333C → S: Loss of sulfurtransferase and 3-mercaptopyruvate sulfurtransferase activities. 1 Publication1
    Mutagenesisi340C → V: Reduces thiosulfate sulfurtransferase activity 4-fold. Slight reduction of 3-mercaptopyruvate sulfurtransferase activity. 1 Publication1

    <p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

    Molecule processing

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the ‘PTM / Processing’ section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 56MitochondrionCombined sourcesAdd BLAST56
    <p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000041652557 – 379Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrialAdd BLAST323

    Amino acid modifications

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei57N-acetylalanineCombined sources1

    Keywords - PTMi

    Acetylation

    Proteomic databases

    PaxDb, a database of protein abundance averages across all three domains of life

    More...
    PaxDbi
    O64530

    PRoteomics IDEntifications database

    More...
    PRIDEi
    O64530

    PTM databases

    iPTMnet integrated resource for PTMs in systems biology context

    More...
    iPTMneti
    O64530

    SwissPalm database of S-palmitoylation events

    More...
    SwissPalmi
    O64530

    <p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

    <p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

    Expressed in roots, rosette and cauline leaves, stems, flowers and siliques.2 Publications

    <p>This subsection of the ‘Expression’ section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

    Induced during senescence.1 Publication

    Gene expression databases

    ExpressionAtlas, Differential and Baseline Expression

    More...
    ExpressionAtlasi
    O64530 baseline and differential

    Genevisible search portal to normalized and curated expression data from Genevestigator

    More...
    Genevisiblei
    O64530 AT

    <p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

    Protein-protein interaction databases

    STRING: functional protein association networks

    More...
    STRINGi
    3702.AT1G79230.1

    <p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

    3D structure databases

    SWISS-MODEL Repository - a database of annotated 3D protein structure models

    More...
    SMRi
    O64530

    Database of comparative protein structure models

    More...
    ModBasei
    Search...

    <p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini91 – 208Rhodanese 1PROSITE-ProRule annotationAdd BLAST118
    Domaini259 – 373Rhodanese 2PROSITE-ProRule annotationAdd BLAST115

    Keywords - Domaini

    Repeat, Transit peptide

    Phylogenomic databases

    evolutionary genealogy of genes: Non-supervised Orthologous Groups

    More...
    eggNOGi
    KOG1529 Eukaryota
    COG2897 LUCA

    The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

    More...
    HOGENOMi
    HOG000157237

    InParanoid: Eukaryotic Ortholog Groups

    More...
    InParanoidi
    O64530

    KEGG Orthology (KO)

    More...
    KOi
    K01011

    Database of Orthologous Groups

    More...
    OrthoDBi
    1553525at2759

    Database for complete collections of gene phylogenies

    More...
    PhylomeDBi
    O64530

    Family and domain databases

    Gene3D Structural and Functional Annotation of Protein Families

    More...
    Gene3Di
    3.40.250.10, 2 hits

    Integrated resource of protein families, domains and functional sites

    More...
    InterProi
    View protein in InterPro
    IPR001763 Rhodanese-like_dom
    IPR036873 Rhodanese-like_dom_sf
    IPR001307 Thiosulphate_STrfase_CS

    Pfam protein domain database

    More...
    Pfami
    View protein in Pfam
    PF00581 Rhodanese, 2 hits

    Simple Modular Architecture Research Tool; a protein domain database

    More...
    SMARTi
    View protein in SMART
    SM00450 RHOD, 2 hits

    Superfamily database of structural and functional annotation

    More...
    SUPFAMi
    SSF52821 SSF52821, 2 hits

    PROSITE; a protein domain and family database

    More...
    PROSITEi
    View protein in PROSITE
    PS00683 RHODANESE_2, 1 hit
    PS50206 RHODANESE_3, 2 hits

    <p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

    <p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

    <p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

    This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

    This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

    Isoform 1 (identifier: O64530-1) [UniParc]FASTAAdd to basket

    This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide
            10         20         30         40         50
    MASTLFSRTF LAASHRLITP SLPQKIFNPA TFLSRSLHSQ LGSASTAYKS
    60 70 80 90 100
    TTWARRAMAS TGVETKAGYS TSSVSTSEPV VSVDWLHANL REPDLKILDA
    110 120 130 140 150
    SWYMPDEQRN PIQEYQVAHI PRALFFDLDG ISDRKTSLPH MLPTEEAFAA
    160 170 180 190 200
    GCSALGIDNK DEVVVYDGKG IFSAARVWWM FRVFGHEKVW VLDGGLPRWR
    210 220 230 240 250
    ASGYDVESSA SGDAILKASA ASEAIEKIYQ GQTVSPITFQ TKFQPHLVWT
    260 270 280 290 300
    LDQVKNNMED PTYQHIDARS KARFDGTAPE PRKGIRSGHI PGSKCIPFPQ
    310 320 330 340 350
    MFDSCNTLLP AEELKKRFDQ EDISLDKPIM ASCGTGVTAC ILAMGLHRLG
    360 370
    KTDVPIYDGS WTEWATQPDL PIESVESSS
    Length:379
    Mass (Da):41,893
    Last modified:August 1, 1998 - v1
    <p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2268F7A5F2DA62B6
    GO
    Isoform 2 (identifier: O64530-2) [UniParc]FASTAAdd to basket

    The sequence of this isoform differs from the canonical sequence as follows:
         1-57: Missing.

    Note: Derived from EST data. No experimental confirmation available.
    Show »
    Length:322
    Mass (Da):35,628
    Checksum:iDAF35006F0D92AEC
    GO

    <p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

    There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
    EntryEntry nameProtein names
    Gene namesLengthAnnotation
    A8MR47A8MR47_ARATH
    Sulfurtransferase
    MST1 ATMST1, ATRDH1, ST1, STR1, SULFURTRANSFERASE 1
    282Annotation score:

    Annotation score:2 out of 5

    <p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

    Experimental Info

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti114E → D in CAB64716 (PubMed:10601861).Curated1
    Sequence conflicti137 – 139SLP → TFA in CAB64716 (PubMed:10601861).Curated3
    Sequence conflicti205Missing in CAB64716 (PubMed:10601861).Curated1
    Sequence conflicti238T → S in CAB64716 (PubMed:10601861).Curated1

    Alternative sequence

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0426331 – 57Missing in isoform 2. CuratedAdd BLAST57

    Sequence databases

    Select the link destinations:

    EMBL nucleotide sequence database

    More...
    EMBLi

    GenBank nucleotide sequence database

    More...
    GenBanki

    DNA Data Bank of Japan; a nucleotide sequence database

    More...
    DDBJi
    Links Updated
    AJ011045 mRNA Translation: CAB55306.1
    AJ131404 mRNA Translation: CAB64716.1
    AB032864 mRNA Translation: BAA85148.1
    AC002986 Genomic DNA Translation: AAC17062.1
    CP002684 Genomic DNA Translation: AEE36219.1
    CP002684 Genomic DNA Translation: AEE36221.1
    AK118208 mRNA Translation: BAC42830.1
    AY075685 mRNA Translation: AAL77692.1
    BT026029 mRNA Translation: ABG48385.1
    AY087137 mRNA Translation: AAM64695.1

    Protein sequence database of the Protein Information Resource

    More...
    PIRi
    T01034
    T52658

    NCBI Reference Sequences

    More...
    RefSeqi
    NP_001077848.1, NM_001084379.1 [O64530-2]
    NP_565203.1, NM_106574.3 [O64530-1]

    Genome annotation databases

    Ensembl plant genome annotation project

    More...
    EnsemblPlantsi
    AT1G79230.1; AT1G79230.1; AT1G79230 [O64530-1]
    AT1G79230.3; AT1G79230.3; AT1G79230 [O64530-2]

    Database of genes from NCBI RefSeq genomes

    More...
    GeneIDi
    844264

    Gramene; a comparative resource for plants

    More...
    Gramenei
    AT1G79230.1; AT1G79230.1; AT1G79230 [O64530-1]
    AT1G79230.3; AT1G79230.3; AT1G79230 [O64530-2]

    KEGG: Kyoto Encyclopedia of Genes and Genomes

    More...
    KEGGi
    ath:AT1G79230

    Keywords - Coding sequence diversityi

    Alternative splicing

    <p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

    <p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    AJ011045 mRNA Translation: CAB55306.1
    AJ131404 mRNA Translation: CAB64716.1
    AB032864 mRNA Translation: BAA85148.1
    AC002986 Genomic DNA Translation: AAC17062.1
    CP002684 Genomic DNA Translation: AEE36219.1
    CP002684 Genomic DNA Translation: AEE36221.1
    AK118208 mRNA Translation: BAC42830.1
    AY075685 mRNA Translation: AAL77692.1
    BT026029 mRNA Translation: ABG48385.1
    AY087137 mRNA Translation: AAM64695.1
    PIRiT01034
    T52658
    RefSeqiNP_001077848.1, NM_001084379.1 [O64530-2]
    NP_565203.1, NM_106574.3 [O64530-1]

    3D structure databases

    SMRiO64530
    ModBaseiSearch...

    Protein-protein interaction databases

    STRINGi3702.AT1G79230.1

    PTM databases

    iPTMnetiO64530
    SwissPalmiO64530

    Proteomic databases

    PaxDbiO64530
    PRIDEiO64530

    Genome annotation databases

    EnsemblPlantsiAT1G79230.1; AT1G79230.1; AT1G79230 [O64530-1]
    AT1G79230.3; AT1G79230.3; AT1G79230 [O64530-2]
    GeneIDi844264
    GrameneiAT1G79230.1; AT1G79230.1; AT1G79230 [O64530-1]
    AT1G79230.3; AT1G79230.3; AT1G79230 [O64530-2]
    KEGGiath:AT1G79230

    Organism-specific databases

    AraportiAT1G79230
    TAIRilocus:2207345 AT1G79230

    Phylogenomic databases

    eggNOGiKOG1529 Eukaryota
    COG2897 LUCA
    HOGENOMiHOG000157237
    InParanoidiO64530
    KOiK01011
    OrthoDBi1553525at2759
    PhylomeDBiO64530

    Enzyme and pathway databases

    BioCyciARA:AT1G79230-MONOMER
    SABIO-RKiO64530

    Miscellaneous databases

    Protein Ontology

    More...
    PROi
    PR:O64530

    Gene expression databases

    ExpressionAtlasiO64530 baseline and differential
    GenevisibleiO64530 AT

    Family and domain databases

    Gene3Di3.40.250.10, 2 hits
    InterProiView protein in InterPro
    IPR001763 Rhodanese-like_dom
    IPR036873 Rhodanese-like_dom_sf
    IPR001307 Thiosulphate_STrfase_CS
    PfamiView protein in Pfam
    PF00581 Rhodanese, 2 hits
    SMARTiView protein in SMART
    SM00450 RHOD, 2 hits
    SUPFAMiSSF52821 SSF52821, 2 hits
    PROSITEiView protein in PROSITE
    PS00683 RHODANESE_2, 1 hit
    PS50206 RHODANESE_3, 2 hits

    ProtoNet; Automatic hierarchical classification of proteins

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    ProtoNeti
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    MobiDB: a database of protein disorder and mobility annotations

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    MobiDBi
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    <p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

    <p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSTR1_ARATH
    <p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O64530
    Secondary accession number(s): A8MSC9, Q9SCY8
    <p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 18, 2012
    Last sequence update: August 1, 1998
    Last modified: September 18, 2019
    This is version 133 of the entry and version 1 of the sequence. See complete history.
    <p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    <p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
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