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Entry version 119 (18 Sep 2019)
Sequence version 2 (31 Jul 2019)
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Protein

zinc_ribbon_16 domain-containing protein

Gene

CELE_F39C12.1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
zinc_ribbon_16 domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:CELE_F39C12.1Imported, F39C12.1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCaenorhabditis elegansImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri6239 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001940 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome X

Organism-specific databases

WormBase

More...
WormBasei
F39C12.1 ; CE53186 ; WBGene00018193

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
O61201

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
O61201

PeptideAtlas

More...
PeptideAtlasi
O61201

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
WBGene00018193 Expressed in 5 organ(s), highest expression level in material anatomical entity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
O61201, 1 interactor

STRING: functional protein association networks

More...
STRINGi
6239.F39C12.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini4987 – 5062zinc_ribbon_16InterPro annotationAdd BLAST76

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni594 – 625DisorderedSequence analysisAdd BLAST32
Regioni747 – 790DisorderedSequence analysisAdd BLAST44
Regioni809 – 836DisorderedSequence analysisAdd BLAST28
Regioni1440 – 1470DisorderedSequence analysisAdd BLAST31
Regioni1973 – 1995DisorderedSequence analysisAdd BLAST23
Regioni2386 – 2456DisorderedSequence analysisAdd BLAST71
Regioni2473 – 2530DisorderedSequence analysisAdd BLAST58
Regioni2542 – 2574DisorderedSequence analysisAdd BLAST33
Regioni2734 – 2887DisorderedSequence analysisAdd BLAST154
Regioni2904 – 3466DisorderedSequence analysisAdd BLAST563
Regioni3749 – 3784DisorderedSequence analysisAdd BLAST36
Regioni3920 – 3976DisorderedSequence analysisAdd BLAST57
Regioni4322 – 4363DisorderedSequence analysisAdd BLAST42

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1924 – 1944Sequence analysisAdd BLAST21
Coiled coili4118 – 4138Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi594 – 612PolyampholyteSequence analysisAdd BLAST19
Compositional biasi818 – 833Pro-richSequence analysisAdd BLAST16
Compositional biasi1451 – 1465AcidicSequence analysisAdd BLAST15
Compositional biasi2401 – 2434PolarSequence analysisAdd BLAST34
Compositional biasi2479 – 2495PolyampholyteSequence analysisAdd BLAST17
Compositional biasi2499 – 2516PolarSequence analysisAdd BLAST18
Compositional biasi2542 – 2559BasicSequence analysisAdd BLAST18
Compositional biasi2734 – 2804PolarSequence analysisAdd BLAST71
Compositional biasi2823 – 2844Pro-richSequence analysisAdd BLAST22
Compositional biasi2869 – 2883Pro-richSequence analysisAdd BLAST15
Compositional biasi2915 – 2947PolarSequence analysisAdd BLAST33
Compositional biasi3001 – 3028PolarSequence analysisAdd BLAST28
Compositional biasi3035 – 3056PolyampholyteSequence analysisAdd BLAST22
Compositional biasi3057 – 3084PolarSequence analysisAdd BLAST28
Compositional biasi3105 – 3131PolarSequence analysisAdd BLAST27
Compositional biasi3207 – 3222PolyampholyteSequence analysisAdd BLAST16
Compositional biasi3234 – 3249Pro-richSequence analysisAdd BLAST16
Compositional biasi3282 – 3306PolarSequence analysisAdd BLAST25
Compositional biasi3317 – 3377PolarSequence analysisAdd BLAST61
Compositional biasi3753 – 3769PolyampholyteSequence analysisAdd BLAST17
Compositional biasi3945 – 3976PolarSequence analysisAdd BLAST32
Compositional biasi4330 – 4346PolarSequence analysisAdd BLAST17

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IT3T Eukaryota
ENOG410Y425 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000015038

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000020319

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
O61201

Identification of Orthologs from Complete Genome Data

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OMAi
PLEIACW

Database of Orthologous Groups

More...
OrthoDBi
22034at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.130.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR037593 MIOS/Sea4
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR036322 WD40_repeat_dom_sf
IPR031488 Zn_ribbon_mio

The PANTHER Classification System

More...
PANTHERi
PTHR16453 PTHR16453, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF17034 zinc_ribbon_16, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50978 SSF50978, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

O61201-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTDPDIGFDD IFKEICPNEF NEFGLKREMR FISERIIVEY DPTDHLSVRE
60 70 80 90 100
IMHPMDAFRS SEPYFKHKLT DKSKQEFVTA IDFHEHITYF PYSKNTGDIC
110 120 130 140 150
LARYISNFND INFTKISGQN LCSLPGETIY GLRVGRLDKG MLAVNHRTDS
160 170 180 190 200
SVNSTVTVID LVKPARNIAH YDSYSPVNTI DWIWHGPFLL AVGDDESLRV
210 220 230 240 250
MDVRCPKAFN AVFFDGGVQK TALCSTRPLE IACWNGSNVL LYDVRRPEVP
260 270 280 290 300
CAIYDIGLEK NESILDMKFN PYITNELFVH TNSHRVFAMN MNPTHLIGGR
310 320 330 340 350
PISEKPYRKW QVITFKHIDR GCTATRHTML RREKMPYEDA EVPLLGYYGQ
360 370 380 390 400
YEAAKNDPQV PIPTLWTYPA EVDMKFLAKI QDVPEIDYES YLYKAVERVS
410 420 430 440 450
AERDFKIHKP KILYQAKGVE SFDFVFPGVN GIMCFDRNTF TYKIVRSPKH
460 470 480 490 500
YEGSVNPYAG SDSVFFYRGL QIQEMIPAQT LTMMCNRLEA GWNAYQVSER
510 520 530 540 550
SLKELAFKIT EESRSVWAKW LHNSVIIQYG GKEFGNIGVN DLEWEDLVPL
560 570 580 590 600
PDGRLPEVEI PPYEYMKDNV ATEEITQMVA PFFRLFLPDP RPDLLSDSES
610 620 630 640 650
ETEDHNAPPG NPCEDDSDEP ESGLPSELSF NMRTLCKCHA KIRYYNKKQS
660 670 680 690 700
DRKYMYASMG NSFAIGSSKR IRDKFFKLGW KSITKPQILG HRLKIDTAFK
710 720 730 740 750
KKSILDDLPK FQRFKPREFQ KRVLPPKLIT DSTSVFMKPE YIKEREAKEK
760 770 780 790 800
EMREKAAQPI QAPIGLSMPK SSRKEPKQTP VTSDGNGEED PEHARFMIRA
810 820 830 840 850
AIQLADNNSS DDEIVSPPQA TPTPPPAPTP TPHVPQALSV RNEKDDFEYE
860 870 880 890 900
TPEDAYFGIK KKRMYVVYQP ATQPLGLRRY KPDRLRESTF IRRLEHLMYW
910 920 930 940 950
GRRRHERDIL YGRFEENDKR QSSVKERCTL DLKFSLNNHM KVGWQTFYDK
960 970 980 990 1000
NFFFSNKCSY NQILRKAIQM YNRLCGFDSH ETTFKSVRHE RMLCGVNPRN
1010 1020 1030 1040 1050
VMDKEAIEEA RYLRKDISII ENSTIKLYNH FMTFVQAQLP YKLDHTIFME
1060 1070 1080 1090 1100
NFEGDTPFSQ RAECPIEEKK QTAKYDENDK FMFPLGRLRF CEFDIPPNFM
1110 1120 1130 1140 1150
HEIENRRVPK PPKKNPGLYL EDFEHLSAQP SKPVLRRSNS CPDLGLAIES
1160 1170 1180 1190 1200
TENSRVCNEF FHEIYRRIIA YRDMCHQREH GNVVPHYGSE YLEPLLTAGV
1210 1220 1230 1240 1250
LQQFNTHSVN GDYKVDDILT NFTKFLEWDS PMISDTDRET GRKFMRRVVP
1260 1270 1280 1290 1300
FKEPQPPRQL EGIDPLFDYI TIEVMRAAAK NLHVSYIFND PILRTWPGLQ
1310 1320 1330 1340 1350
ILDEGRDGMF TLCPKFPRVP AEQLSEIDIF KSPLCLPTKA VEFYSDFFTE
1360 1370 1380 1390 1400
VLLIGRDSKK NRIRPPVYNE HNINVPEGLI EILKPAFYGF FKYDRESRYN
1410 1420 1430 1440 1450
EEQSLEMKNR RELQRAIFEK RIITFRQPVI EETEQELAIE ENLNVEEDDL
1460 1470 1480 1490 1500
RTTSEESEGE DEVKNDSDPN DISDFWKIFK VTEDEAGVNG DRDSDEDLVQ
1510 1520 1530 1540 1550
RKIGIFHAGD DDSYNCFNPH TRENIRKISV EEEEVEDEPK KLGSVLTNLF
1560 1570 1580 1590 1600
EQDLVKQKRL GDCPIGSPRK SSIKIDYNRG MVVPLTELTK QTKTVTWGEV
1610 1620 1630 1640 1650
TEHSVPPRPI RHRNRHRVEV DAKFYRDLYS VQLTRRVKSN DNFQKTKPAR
1660 1670 1680 1690 1700
KNSDPTAVHH IGIPRRASLD QFYRKDLPAT CSACIKEPWP TKEICIVCHP
1710 1720 1730 1740 1750
DTTIFRCTNI VNLHEPCLIC GNNIYKFSCS NYEHHNQYVT PIISIFDQPK
1760 1770 1780 1790 1800
LKPVDEEFKK KLAVKNETVI YENTPAVWNV KAYRAGESAV NTFFAETDDR
1810 1820 1830 1840 1850
GFKTLQGDQL AGFFHREFNW VTWRMDEDKS ERVFVSEEFD VAFDRDADID
1860 1870 1880 1890 1900
MMRDTMNTIS QDGEMDMMTT YDQRTGMRIR RWISYAALAT RVQKQNEKVH
1910 1920 1930 1940 1950
YRKKAAEREA RILSGEISVK PSLLNELKKK AKDKEVAATI ATENDDAKKE
1960 1970 1980 1990 2000
EERRKAYKLW KKLPIPEFIE DPKKKMPNFA PPKSEDWLES SGSEDELPPI
2010 2020 2030 2040 2050
KSRILSKEMK EFIDTIRVHM EQKPKSFEGI AVTYGKLFEK RPILKNDIVL
2060 2070 2080 2090 2100
VTRKKNVRRK PPPFRIQRIP LDESWLNTAF TVSFLPVPVQ VRNPRDPMKW
2110 2120 2130 2140 2150
TVPFYNSQRL ALTAQETKER ALRPPTPPPT LKKLYTTMKD VEKAFYHRKR
2160 2170 2180 2190 2200
VKSQITLKKA KTARQLRFHK KLYGHSKEPS HPTKAWTHVH RQIGLKKSKV
2210 2220 2230 2240 2250
QPRKLKEAHY LPGLAKQKNK YIFTYFPNPK LEKVKLSQRK PSRISSASDS
2260 2270 2280 2290 2300
EYCPIVKFPK VQKRVVELKE DHPTNNSELG IIERKKKELK REDPPAVLMS
2310 2320 2330 2340 2350
STRSTLKRPE TGSFVKREIS VGKPALPKAD VQKTLETVSL KRIDSQTEPK
2360 2370 2380 2390 2400
TESIKQRRHP IFEHLEDKSI NNFSQGIPAI SVVEPSSCQL PRKSRQKEHK
2410 2420 2430 2440 2450
ITTNSNSSNS IDSDGMKMDR SSSKQPSVAV RSKSTMIPHS RKLRKQMPAC
2460 2470 2480 2490 2500
RSFSVDKGSS YRKALKKIAR KCRSIQKEKS KKVTKPDDSK PEVIPSDQKP
2510 2520 2530 2540 2550
KSQLETSVAL PSKSAKVSTK KSEKDLSPLK STELQLERKF LKNKVHNRRS
2560 2570 2580 2590 2600
SRAPGIHHQR PLHPRWLPTD HETDRKDSRA ASQFRFQHMR SKRFTRQRKV
2610 2620 2630 2640 2650
LHKEPRRSRV LNTIRKNDSL KGKNHRMKYE QPIDAKISDM FLKPWKPLRR
2660 2670 2680 2690 2700
SKKGIRSRKK YKKNVKAKNT TKLQPMPWKQ MLRKLADYNV NIKRVRLSDF
2710 2720 2730 2740 2750
KKIRPKQQED METKEKSIEI VVKPSNNLKS CLKRGQGHRS MKFNSQSPDG
2760 2770 2780 2790 2800
KTSSAGSNKT LKLVKTSAHS LAGTSPPKTS FTVPSLLELD DSSPLKNTWL
2810 2820 2830 2840 2850
TNTRKNSKGE KKVKENTAPV QQAPVPVSPP REETPEPTPS PPVRLLRPLS
2860 2870 2880 2890 2900
AESEEKVPVE KVDTPSPLTP PAASVPAPPP KMPADQQWRA AMMARRYMGA
2910 2920 2930 2940 2950
SKPVFVKPPS ALSKTESLKE ASNIQESAST TRVQPALVVS HSTPEPVQLT
2960 2970 2980 2990 3000
RMAAAKKSEQ KEYKTPVAKP KATAPPPITP KAASIRPATQ KLHESELTKS
3010 3020 3030 3040 3050
EASRNVSSSS GKSQKQADVQ SRPKLQSVQE KRSVPKVVKP LDPKGPQKEQ
3060 3070 3080 3090 3100
ESKKNEKVVP STNVTLDDQA SSSSNQQGPG SAKKPSASIF TALFGRKKEK
3110 3120 3130 3140 3150
KMTSSTAESS SIPIPSPENQ EATSETNRSS PILPRIKKPE TGQLIKRSPT
3160 3170 3180 3190 3200
SDVPKPCVVS GAIVKFVDGK PISNSPSYGK PMARRRPKKA DSAADSGDLG
3210 3220 3230 3240 3250
SDEGSTSHEG CLKDEENSQK KPAGKTVRFG PISYEPPEPA PPQPVEIPKV
3260 3270 3280 3290 3300
EPTPEISFES LAQQMAQKTL RKEEASKILE HYPVTEQTSP STAEPVSPTK
3310 3320 3330 3340 3350
SGSKLSFFGL SPFGKVTPKK NTAQTQSLTV LESTSSPELL TPSNPETSNT
3360 3370 3380 3390 3400
ASTSSSKQPK SLSEEKITAT QMIQTRGRPI RKLSHRRQLK IGDPSPLQLS
3410 3420 3430 3440 3450
GDSSLPRPAQ PSPEKPPQLE VPQGVQTYNP PSQRKYYTRL GREWKPPPKA
3460 3470 3480 3490 3500
KTPLSIRVPQ SGVSTSTPAI DLSAKEVLLA PIEKTKKMRK RKPKPMETTL
3510 3520 3530 3540 3550
VLDGTEHFKK LTAENLQLLS RQFKSKRKNK KKRTKTWSVI GCDENDDSTK
3560 3570 3580 3590 3600
CMQHNKLLEE FRDLKKSLIT RQLDEKMITA RAVFNPRFTD SSSTKHELLR
3610 3620 3630 3640 3650
NKPKFETTRK KLKRLANNRQ QKIRMSGIHS QPKRDVAISA IRQVQKVRFF
3660 3670 3680 3690 3700
QSTGKKMMNP IISGFKPKSI LKPPKPPATW LFRIDSEGNK LYMKKLGPSD
3710 3720 3730 3740 3750
WQKKNDEKCN PMSAMDPRKK KSNSYLKRWA KMMAKVGKKN MTKLFETNQL
3760 3770 3780 3790 3800
TRRLGAPKKD SHPKDVLVDP PKADAPPPSR SLSWTTVSSN ASLNSLLDAL
3810 3820 3830 3840 3850
NTVGSDEPST SSGIVTDIAP PIVKEQFRKA KESRPTQQTV SKKYPTVYLG
3860 3870 3880 3890 3900
MTVARSPSSS TSLVNLDERE AVSSLAQDGS EIVEYVGQEE PVVETTKRRF
3910 3920 3930 3940 3950
DPFVRPISAL FKAFTSSSPE VGLEADSRSR PTERTLRGLF RRSSPTMPEF
3960 3970 3980 3990 4000
STRHVSSSPT RRRANRGPVT SVSQGSSAED ILALMQAQPD ALENMEEQVV
4010 4020 4030 4040 4050
SKFPPIQLQA PVLNGKSMWR PKLKLKNSLY TQFKELKEES KKRKLVEYLD
4060 4070 4080 4090 4100
QNYKNNKSYS TLQTLITFNL DQYMRTNLYP RPKLNTDLLG KYDPNSLRVS
4110 4120 4130 4140 4150
SSSRSGLQRS TRLIVKKIRR CQEQLEKWKR LIATSTNQQL TNGELVKRAK
4160 4170 4180 4190 4200
ASMKQASNRK AKKVLVLYKF KRTCFKYRVQ VTITKSARKI LADQNQKKQL
4210 4220 4230 4240 4250
IMHEEKKRTP TILTIGDEDD ENEIVDLLSG NEDSANCQNL ADYDGDNDDD
4260 4270 4280 4290 4300
AIDTELDWVA NTSQVVIRKN QRRRLLRHYF NFAIRMARKV SRRSVGVQKP
4310 4320 4330 4340 4350
LVFYSFISQM RSRMRNFMRI RHNDQTRARQ KNKLAVSNST TTLKETRLRS
4360 4370 4380 4390 4400
SSKKQNRKSK SQRQIPICIR NSLKYGGTAE KKVIVEQSKF NFQKLNTKLQ
4410 4420 4430 4440 4450
TFFECLDEYI DVGTPIKLVF SSKNTILPKK MFDVKTKLID PVYYTSPSPC
4460 4470 4480 4490 4500
NTDSDFSDNT PDDYKSSDLK QFFLRESLES TYHVKGLPGL IYLARLVQER
4510 4520 4530 4540 4550
VADDVERNIP FRGPGMETCN LVVYMTPIRR LMLNSFGLRM PDRLDDVMLS
4560 4570 4580 4590 4600
KHQNEKFELW FDRLYRMLCY GRGDLCKYII DKISLGQGPP NKKYEKMDIT
4610 4620 4630 4640 4650
YQAHIIHKLY KKMMYIENGR EAKLAVQEFM DIGLDIDHEP FSKQVKMGQY
4660 4670 4680 4690 4700
DRMLYGNPKP WNKDNWVEAC DQFLNYSNTK EDVLVSCQAS LLLMRMIFLG
4710 4720 4730 4740 4750
GYSQDVVDHL ITMNLPMRDK LLFIINLTPP DNLVENIVKI FHTVRGLDRL
4760 4770 4780 4790 4800
PFVGLGYHAD PLRVLFEEAV ESGDPQLIAH IVRVGRCLDR RSREPMMTDC
4810 4820 4830 4840 4850
GSDHIQKRDF ANIMTKVITN GNERRPYGAP TMDEMFPFRY VRNPDGSDVA
4860 4870 4880 4890 4900
ETTEELANIM ECEVTRYMAI LELTKGAAVT KGDLDHNPKF NTYPHKFYFD
4910 4920 4930 4940 4950
VLCTGCKMNV SKGRNLGRLG RTLCVSTMPL IEQDKDKKRW PNAKTMSPRL
4960 4970 4980 4990 5000
TFENYIETLD PTENKMLMAK DIEEEKTDIT VQVLPSRFGC FQCRFSLPRC
5010 5020 5030 5040 5050
CVCMCPYLND HMDFALKDYN ESFSQFSICN ICNHGGHVNH IATWFETEKY
5060 5070 5080 5090 5100
CPVAGCDCRC QRSKQTKHLK ARLRRHMLLS ANMRAKSHLC NPECAIDADI
5110
DEGYLPDPDL ALLDD
Length:5,115
Mass (Da):587,144
Last modified:July 31, 2019 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD5FB76B5A31D9826
GO

Sequence databases

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EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD70841.2

Protein sequence database of the Protein Information Resource

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PIRi
T32650

NCBI Reference Sequences

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RefSeqi
NP_508825.1, NM_076424.3

Genome annotation databases

Ensembl metazoan genome annotation project

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EnsemblMetazoai
F39C12.1.1; F39C12.1.1; WBGene00018193

Database of genes from NCBI RefSeq genomes

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GeneIDi
180759

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
cel:CELE_F39C12.1

UCSC genome browser

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UCSCi
F39C12.1 c. elegans

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD70841.2
PIRiT32650
RefSeqiNP_508825.1, NM_076424.3

3D structure databases

Database of comparative protein structure models

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ModBasei
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SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

IntActiO61201, 1 interactor
STRINGi6239.F39C12.1

Proteomic databases

EPDiO61201
PaxDbiO61201
PeptideAtlasiO61201

Genome annotation databases

EnsemblMetazoaiF39C12.1.1; F39C12.1.1; WBGene00018193
GeneIDi180759
KEGGicel:CELE_F39C12.1
UCSCiF39C12.1 c. elegans

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
180759
WormBaseiF39C12.1 ; CE53186 ; WBGene00018193

Phylogenomic databases

eggNOGiENOG410IT3T Eukaryota
ENOG410Y425 LUCA
GeneTreeiENSGT00390000015038
HOGENOMiHOG000020319
InParanoidiO61201
OMAiPLEIACW
OrthoDBi22034at2759

Gene expression databases

BgeeiWBGene00018193 Expressed in 5 organ(s), highest expression level in material anatomical entity

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR037593 MIOS/Sea4
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR036322 WD40_repeat_dom_sf
IPR031488 Zn_ribbon_mio
PANTHERiPTHR16453 PTHR16453, 1 hit
PfamiView protein in Pfam
PF17034 zinc_ribbon_16, 1 hit
SUPFAMiSSF50978 SSF50978, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiO61201_CAEEL
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O61201
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: July 31, 2019
Last modified: September 18, 2019
This is version 119 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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