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Protein

Homeobox protein NOBOX

Gene

NOBOX

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Transcription factor which may play a role in oogenesis. Binds preferentially to the DNA sequences 5'-TAATTG-3', 5'-TAGTTG-3' and 5'-TAATTA-3'.2 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section specifies the position and type of each DNA-binding domain present within the protein.<p><a href='/help/dna_bind' target='_top'>More...</a></p>DNA bindingi272 – 363HomeoboxPROSITE-ProRule annotationAdd BLAST92

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDevelopmental protein, DNA-binding
Biological processDifferentiation, Oogenesis, Transcription, Transcription regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Homeobox protein NOBOX
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:NOBOX
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 7

Organism-specific databases

Eukaryotic Pathogen Database Resources

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EuPathDBi
HostDB:ENSG00000106410.14

Human Gene Nomenclature Database

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HGNCi
HGNC:22448 NOBOX

Online Mendelian Inheritance in Man (OMIM)

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MIMi
610934 gene

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_O60393

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section provides information on the disease(s) associated with genetic variations in a given protein. The information is extracted from the scientific literature and diseases that are also described in the <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim">OMIM</a> database are represented with a <a href="http://www.uniprot.org/diseases">controlled vocabulary</a> in the following way:<p><a href='/help/involvement_in_disease' target='_top'>More...</a></p>Involvement in diseasei

Premature ovarian failure 5 (POF5)4 Publications
The disease is caused by mutations affecting the gene represented in this entry.
Disease descriptionAn ovarian disorder defined as the cessation of ovarian function under the age of 40 years. It is characterized by oligomenorrhea or amenorrhea, in the presence of elevated levels of serum gonadotropins and low estradiol.
See also OMIM:611548
Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_06601391G → W in POF5; unknown pathological significance; decreased transactivation activity; decreased nuclear location; intranuclear and cytosolic aggregates. 3 PublicationsCorresponds to variant dbSNP:rs77587352EnsemblClinVar.1
Natural variantiVAR_078292111G → R in POF5; unknown pathological significance; loss of transactivation activity; intranuclear and cytosolic aggregates; not statistically significant decrease of nuclear location. 2 PublicationsCorresponds to variant dbSNP:rs571490209Ensembl.1
Natural variantiVAR_061266117R → W in POF5; unknown pathological significance; decreased transactivation activity. 2 PublicationsCorresponds to variant dbSNP:rs7800847EnsemblClinVar.1
Natural variantiVAR_078293152G → R in POF5; unknown pathological significance; decreased nuclear location; intranuclear and cytosolic aggregates. 1 PublicationCorresponds to variant dbSNP:rs201806397EnsemblClinVar.1
Natural variantiVAR_066014342S → T in POF5. 1 PublicationCorresponds to variant dbSNP:rs193303103EnsemblClinVar.1
Natural variantiVAR_066015350V → L in POF5. 1 PublicationCorresponds to variant dbSNP:rs193303104EnsemblClinVar.1
Natural variantiVAR_036636355R → H in POF5. 1 PublicationCorresponds to variant dbSNP:rs201947677EnsemblClinVar.1
Natural variantiVAR_078294371K → T in POF5; unknown pathological significance; decreased transactivation activity. 1 PublicationCorresponds to variant dbSNP:rs189306575Ensembl.1
Natural variantiVAR_078295449 – 691Missing in POF5; unknown pathological significance; not statistically significant decrease of nuclear location. 1 PublicationAdd BLAST243
Natural variantiVAR_036638452D → N in POF5; unknown pathological significance; decreased nuclear location; intranuclear and cytosolic aggregates. 2 PublicationsCorresponds to variant dbSNP:rs112190116EnsemblClinVar.1

Keywords - Diseasei

Disease mutation, Premature ovarian failure

Organism-specific databases

DisGeNET

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DisGeNETi
135935

MalaCards human disease database

More...
MalaCardsi
NOBOX
MIMi611548 phenotype

Open Targets

More...
OpenTargetsi
ENSG00000106410

Orphanet; a database dedicated to information on rare diseases and orphan drugs

More...
Orphaneti
619 NON RARE IN EUROPE: Primary ovarian failure

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
NOBOX

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002688651 – 691Homeobox protein NOBOXAdd BLAST691

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

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jPOSTi
O60393

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
O60393

PeptideAtlas

More...
PeptideAtlasi
O60393

PRoteomics IDEntifications database

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PRIDEi
O60393

ProteomicsDB human proteome resource

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ProteomicsDBi
49389
49390 [O60393-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

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iPTMneti
O60393

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

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PhosphoSitePlusi
O60393

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in ovaries, testes and pancreas. Expressed within all stages of the adult female germline, from primordial follicles through to MII oocytes.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000106410 Expressed in 9 organ(s), highest expression level in myometrium

CleanEx database of gene expression profiles

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CleanExi
HS_NOBOX

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
O60393 HS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000419457

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

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ProteinModelPortali
O60393

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
O60393

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi392 – 668Pro-richAdd BLAST277

Keywords - Domaini

Homeobox

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
KOG0490 Eukaryota
ENOG410YIJ3 LUCA

Ensembl GeneTree

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GeneTreei
ENSGT00650000093445

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
HOG000113810

The HOVERGEN Database of Homologous Vertebrate Genes

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HOVERGENi
HBG082039

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
O60393

Identification of Orthologs from Complete Genome Data

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OMAi
CLPELPF

Database of Orthologous Groups

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OrthoDBi
729946at2759

Database for complete collections of gene phylogenies

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PhylomeDBi
O60393

TreeFam database of animal gene trees

More...
TreeFami
TF337576

Family and domain databases

Conserved Domains Database

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CDDi
cd00086 homeodomain, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00046 Homeodomain, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00389 HOX, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46689 SSF46689, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50071 HOMEOBOX_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 6 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: O60393-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MALLLTLTSP DLEGTWDTRD KDGFKAQEGP PLAVPEFPVC GLYRIYGVCG
60 70 80 90 100
SFSSFFIIRC SLCALETLKS PQHDPLEIPE QSLKLIPLVS GKRELTRGQK
110 120 130 140 150
AGEKPLAAGP GEEELLRGSA PHAQDTQSEE LPPSCTISGE KKPPAVSGEA
160 170 180 190 200
TGADAGRLCP PPRSRAPHKD RTLARSRPQT QGEDCSLPVG EVKIGKRSYS
210 220 230 240 250
PAPGKQKKPN AMGLAPTSSP GAPNSARATH NPVPCGSGRG PCHLANLLST
260 270 280 290 300
LAQSNQNRDH KQGPPEVTCQ IRKKTRTLYR SDQLEELEKI FQEDHYPDSD
310 320 330 340 350
KRREIAQTVG VTPQRIMVKG AGSLVAGWSG GGPTIETLEL QSERSAVAWV
360 370 380 390 400
WFQNRRAKWR KMEKLNGKES KDNPAAPGPA SSQCSSAAEI LPAVPMEPKP
410 420 430 440 450
DPFPQESPLD TFPEPPMLLT SDQTLAPTQP SEGAQRVVTP PLFSPPPVRR
460 470 480 490 500
ADLPFPLGPV HTPQLMPLLM DVAGSDSSHK DGPCGSWGTS ITLPPPCSYL
510 520 530 540 550
EELEPQDYQQ SNQPGPFQFS QAPQPPLFQS PQPKLPYLPT FPFSMPSSLT
560 570 580 590 600
LPPPEDSLFM FPCGPSGGTS QGYCPGASSG QILMQPPAGN IGTASWSDPC
610 620 630 640 650
LPELPFPGPF CPQALGHPPG GDGYFPDLFP TPCPQALGRQ PSSALSWMPE
660 670 680 690
GARPGTGPLL SKAKEEPPAA SLDQPSALEE ARGDDKNSHV P
Length:691
Mass (Da):73,906
Last modified:May 5, 2009 - v4
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i02ED17B02018A89C
GO
Isoform 2 (identifier: O60393-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     318-349: Missing.

Note: No experimental confirmation available.
Show »
Length:659
Mass (Da):70,709
Checksum:i7D9A27F0A837EB6D
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2R8Y8C8A0A2R8Y8C8_HUMAN
Homeobox protein NOBOX
NOBOX
574Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8Y683A0A2R8Y683_HUMAN
Homeobox protein NOBOX
NOBOX
300Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8Y4G1A0A2R8Y4G1_HUMAN
Homeobox protein NOBOX
NOBOX
574Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8YEW3A0A2R8YEW3_HUMAN
Homeobox protein NOBOX
NOBOX
691Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8Y264A0A2R8Y264_HUMAN
Homeobox protein NOBOX
NOBOX
659Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8YFG1A0A2R8YFG1_HUMAN
Homeobox protein NOBOX
NOBOX
300Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAC12957 differs from that shown. Reason: Erroneous gene model prediction.Curated

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_07829144R → L Polymorphism; no effect on transactivation activity; not statistically significant decrease of nuclear location. 2 PublicationsCorresponds to variant dbSNP:rs115206969EnsemblClinVar.1
Natural variantiVAR_06601391G → W in POF5; unknown pathological significance; decreased transactivation activity; decreased nuclear location; intranuclear and cytosolic aggregates. 3 PublicationsCorresponds to variant dbSNP:rs77587352EnsemblClinVar.1
Natural variantiVAR_078292111G → R in POF5; unknown pathological significance; loss of transactivation activity; intranuclear and cytosolic aggregates; not statistically significant decrease of nuclear location. 2 PublicationsCorresponds to variant dbSNP:rs571490209Ensembl.1
Natural variantiVAR_061266117R → W in POF5; unknown pathological significance; decreased transactivation activity. 2 PublicationsCorresponds to variant dbSNP:rs7800847EnsemblClinVar.1
Natural variantiVAR_078293152G → R in POF5; unknown pathological significance; decreased nuclear location; intranuclear and cytosolic aggregates. 1 PublicationCorresponds to variant dbSNP:rs201806397EnsemblClinVar.1
Natural variantiVAR_066014342S → T in POF5. 1 PublicationCorresponds to variant dbSNP:rs193303103EnsemblClinVar.1
Natural variantiVAR_066015350V → L in POF5. 1 PublicationCorresponds to variant dbSNP:rs193303104EnsemblClinVar.1
Natural variantiVAR_036636355R → H in POF5. 1 PublicationCorresponds to variant dbSNP:rs201947677EnsemblClinVar.1
Natural variantiVAR_036637360R → Q1 PublicationCorresponds to variant dbSNP:rs199538689Ensembl.1
Natural variantiVAR_078294371K → T in POF5; unknown pathological significance; decreased transactivation activity. 1 PublicationCorresponds to variant dbSNP:rs189306575Ensembl.1
Natural variantiVAR_078295449 – 691Missing in POF5; unknown pathological significance; not statistically significant decrease of nuclear location. 1 PublicationAdd BLAST243
Natural variantiVAR_036638452D → N in POF5; unknown pathological significance; decreased nuclear location; intranuclear and cytosolic aggregates. 2 PublicationsCorresponds to variant dbSNP:rs112190116EnsemblClinVar.1
Natural variantiVAR_036639482G → S1 PublicationCorresponds to variant dbSNP:rs2525702EnsemblClinVar.1
Natural variantiVAR_036640517F → L1 PublicationCorresponds to variant dbSNP:rs2699503EnsemblClinVar.1
Natural variantiVAR_078296619P → L Polymorphism; no effect on transactivation activity. 1 PublicationCorresponds to variant dbSNP:rs146227301EnsemblClinVar.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting. The information stored in this subsection is used to automatically construct alternative protein sequence(s) for display.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_028796318 – 349Missing in isoform 2. 1 PublicationAdd BLAST32

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AC004534 Genomic DNA Translation: AAC12957.1 Sequence problems.

The Consensus CDS (CCDS) project

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CCDSi
CCDS47736.2 [O60393-1]

NCBI Reference Sequences

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RefSeqi
NP_001073882.3, NM_001080413.3 [O60393-1]
XP_016867231.1, XM_017011742.1 [O60393-2]

UniGene gene-oriented nucleotide sequence clusters

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UniGenei
Hs.558628

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000467773; ENSP00000419457; ENSG00000106410 [O60393-1]
ENST00000483238; ENSP00000419565; ENSG00000106410 [O60393-2]

Database of genes from NCBI RefSeq genomes

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GeneIDi
135935

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
hsa:135935

UCSC genome browser

More...
UCSCi
uc022aoj.1 human [O60393-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004534 Genomic DNA Translation: AAC12957.1 Sequence problems.
CCDSiCCDS47736.2 [O60393-1]
RefSeqiNP_001073882.3, NM_001080413.3 [O60393-1]
XP_016867231.1, XM_017011742.1 [O60393-2]
UniGeneiHs.558628

3D structure databases

ProteinModelPortaliO60393
SMRiO60393
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000419457

PTM databases

iPTMnetiO60393
PhosphoSitePlusiO60393

Polymorphism and mutation databases

BioMutaiNOBOX

Proteomic databases

jPOSTiO60393
PaxDbiO60393
PeptideAtlasiO60393
PRIDEiO60393
ProteomicsDBi49389
49390 [O60393-2]

Protocols and materials databases

The DNASU plasmid repository

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DNASUi
135935
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000467773; ENSP00000419457; ENSG00000106410 [O60393-1]
ENST00000483238; ENSP00000419565; ENSG00000106410 [O60393-2]
GeneIDi135935
KEGGihsa:135935
UCSCiuc022aoj.1 human [O60393-1]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
135935
DisGeNETi135935
EuPathDBiHostDB:ENSG00000106410.14

GeneCards: human genes, protein and diseases

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GeneCardsi
NOBOX
HGNCiHGNC:22448 NOBOX
MalaCardsiNOBOX
MIMi610934 gene
611548 phenotype
neXtProtiNX_O60393
OpenTargetsiENSG00000106410
Orphaneti619 NON RARE IN EUROPE: Primary ovarian failure

GenAtlas: human gene database

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GenAtlasi
Search...

Phylogenomic databases

eggNOGiKOG0490 Eukaryota
ENOG410YIJ3 LUCA
GeneTreeiENSGT00650000093445
HOGENOMiHOG000113810
HOVERGENiHBG082039
InParanoidiO60393
OMAiCLPELPF
OrthoDBi729946at2759
PhylomeDBiO60393
TreeFamiTF337576

Miscellaneous databases

The Gene Wiki collection of pages on human genes and proteins

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GeneWikii
NOBOX

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

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GenomeRNAii
135935

Protein Ontology

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PROi
PR:O60393

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
Search...

Gene expression databases

BgeeiENSG00000106410 Expressed in 9 organ(s), highest expression level in myometrium
CleanExiHS_NOBOX
GenevisibleiO60393 HS

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
PfamiView protein in Pfam
PF00046 Homeodomain, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS50071 HOMEOBOX_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiNOBOX_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O60393
Secondary accession number(s): A6NCD3, A8MZN5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: May 5, 2009
Last modified: January 16, 2019
This is version 136 of the entry and version 4 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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