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Protein

54S ribosomal protein L23, mitochondrial

Gene

mrpl23

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
54S ribosomal protein L23, mitochondrial
Gene namesi
Name:mrpl23Imported
ORF Names:SPBC16G5.04
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC16G5.04
PomBaseiSPBC16G5.04 mrpl23

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 29MitochondrionSequence analysisAdd BLAST29
ChainiPRO_000031462730 – 15754S ribosomal protein L23, mitochondrialAdd BLAST128

Proteomic databases

MaxQBiO60118
PaxDbiO60118
PRIDEiO60118

Interactioni

Subunit structurei

Component of the mitochondrial large ribosomal subunit.By similarity

Protein-protein interaction databases

STRINGi4896.SPBC16G5.04.1

Structurei

3D structure databases

ProteinModelPortaliO60118
SMRiO60118
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.Sequence analysis

Keywords - Domaini

Transit peptide

Phylogenomic databases

HOGENOMiHOG000225288
InParanoidiO60118
KOiK02871
OMAiVLMGKHK
OrthoDBiEOG092C59OH
PhylomeDBiO60118

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O60118-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTLNGQTAL AYAKVWHHVS AKNVPLGRLA SQIATTLMGK HKPIYHPAAD
60 70 80 90 100
CGDVVVVTDC SEIGISGRKL ENHKYYSHSG QPGHLKEWTM EEMAAKRGHK
110 120 130 140 150
DLLRRAVGGM LPRNKLWDRR MKRLYIYDGA EHPYKANIFR SYHNPVSSQI

AKELFSK
Length:157
Mass (Da):17,768
Last modified:August 1, 1998 - v1
Checksum:i47E52BF7BBFA42D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAA19024.1
PIRiT39596
RefSeqiNP_596753.1, NM_001023773.2

Genome annotation databases

EnsemblFungiiSPBC16G5.04.1; SPBC16G5.04.1:pep; SPBC16G5.04
GeneIDi2540088
KEGGispo:SPBC16G5.04

Similar proteinsi

Entry informationi

Entry nameiRM23_SCHPO
AccessioniPrimary (citable) accession number: O60118
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 1, 1998
Last modified: February 28, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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