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UniProtKB - O59744 (YN28_SCHPO)
Protein
Uncharacterized transcriptional regulatory protein C530.08
Gene
SPBC530.08
Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 31 – 57 | Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd BLAST | 27 |
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: PomBase
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: PomBase
- zinc ion binding Source: PomBase
GO - Biological processi
- regulation of transcription by RNA polymerase II Source: PomBase
- transcription, DNA-templated Source: InterPro
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized transcriptional regulatory protein C530.08 |
Gene namesi | ORF Names:SPBC530.08 |
Organismi | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) |
Taxonomic identifieri | 284812 [NCBI] |
Taxonomic lineagei | Eukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces › |
Proteomesi |
|
Organism-specific databases
PomBasei | SPBC530.08 |
VEuPathDBi | FungiDB:SPBC530.08 |
Subcellular locationi
Nucleus
- Nucleus membrane PROSITE-ProRule annotation1 Publication; Single-pass membrane protein 1 Publication
Cytoplasm and Cytosol
- Cytoplasm 1 Publication
Cytosol
- cytosol Source: PomBase
Nucleus
- nuclear membrane Source: UniProtKB-SubCell
- nucleus Source: PomBase
Other locations
- integral component of membrane Source: PomBase
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 560 – 580 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
Cytoplasm, Membrane, NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000310391 | 1 – 815 | Uncharacterized transcriptional regulatory protein C530.08Add BLAST | 815 |
Proteomic databases
MaxQBi | O59744 |
PaxDbi | O59744 |
PTM databases
iPTMneti | O59744 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 276790, 2 interactors |
STRINGi | 4896.SPBC530.08.1 |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 646 – 668 | DisorderedSequence analysisAdd BLAST | 23 | |
Regioni | 769 – 792 | DisorderedSequence analysisAdd BLAST | 24 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 777 – 792 | Polar residuesSequence analysisAdd BLAST | 16 |
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | ENOG502QSY2, Eukaryota |
HOGENOMi | CLU_373452_0_0_1 |
InParanoidi | O59744 |
OMAi | YYFHFAN |
PhylomeDBi | O59744 |
Family and domain databases
CDDi | cd00067, GAL4, 1 hit |
Gene3Di | 4.10.240.10, 1 hit |
InterProi | View protein in InterPro IPR007219, Transcription_factor_dom_fun IPR001138, Zn2-C6_fun-type_DNA-bd IPR036864, Zn2-C6_fun-type_DNA-bd_sf |
Pfami | View protein in Pfam PF04082, Fungal_trans, 1 hit PF00172, Zn_clus, 1 hit |
SMARTi | View protein in SMART SM00906, Fungal_trans, 1 hit SM00066, GAL4, 1 hit |
SUPFAMi | SSF57701, SSF57701, 1 hit |
PROSITEi | View protein in PROSITE PS00463, ZN2_CY6_FUNGAL_1, 1 hit PS50048, ZN2_CY6_FUNGAL_2, 1 hit |
i Sequence
Sequence statusi: Complete.
O59744-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDNESHSQET ESKILEGAKV ATRRRRVTRA CDMCRRKKIK CDGLRPCKNC
60 70 80 90 100
KAGKLECTYH MPSSRKSSFS PEYVENLESR VRYLETLLKK NTNFDLSSNS
110 120 130 140 150
PSFLFFLREQ KFQATNELEN MSPERKVIFT SMINYGNLFV DAKHGTRYFR
160 170 180 190 200
GGSSIHVLIQ HLIRRLPGDF EICEPYSAYP LGNKNIQFDD NDPEYQFFTP
210 220 230 240 250
TPRFSIDFMV SSVDPREIQL PGIEEALCIT KAAVSYVSGI VFYTTYADFP
260 270 280 290 300
KKIRLLYSGN YQGNFFPLFL SILCVGYYHH LLNNPSNTEL QSLIKKYSFY
310 320 330 340 350
SERLVKSADN FTIESIQCLL ILSIYRYCRT EISAAWYYMK LGLNCCLRLG
360 370 380 390 400
LHRNITEGFT EEQIDSRRRI FWAIYCYDRQ LCTLFGFPLG VRDEDIDQCL
410 420 430 440 450
PVTPKFPSVT EIEANARLFF FHGVKLYKIS SRILTKLYSP NSRNVTKKHI
460 470 480 490 500
SYAVIQDLEQ LLDGFYNSLP RVFRAEQPGE FQANHFFYNL QLVYYSFRML
510 520 530 540 550
IYRPLLHYLE ADSPAMQALK VPDRQTAFTL ACKCVDSAIV CVQNLSHLSK
560 570 580 590 600
GLKRTLDRYY WTTVYCGFST IVTLIFAALL TKNTNLLIHI SVARESIEAL
610 620 630 640 650
AHECVTRRLL PLIDKMRESL MKILESNADG YKQMSPTKAP QVFESESNVP
660 670 680 690 700
INNGPQQSID KESNSNTQLP QVETEGQQQS VFDGNIGTIP YQAYNMNEDS
710 720 730 740 750
FIDINTLSSM LNYHTQAVSI HHPSFYISRS DVPLEEEFQI PNELLAVDPV
760 770 780 790 800
AESMQENSDI INEAFGLVDP DVSDGKSRES SSLNNSTPFN PTVNIDPASI
810
LEHFSQNVMK DSQNS
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU329671 Genomic DNA Translation: CAA19174.1 |
PIRi | T40524 |
RefSeqi | NP_595321.1, NM_001021228.2 |
Genome annotation databases
EnsemblFungii | SPBC530.08.1; SPBC530.08.1:pep; SPBC530.08 |
GeneIDi | 2540259 |
KEGGi | spo:SPBC530.08 |
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU329671 Genomic DNA Translation: CAA19174.1 |
PIRi | T40524 |
RefSeqi | NP_595321.1, NM_001021228.2 |
3D structure databases
AlphaFoldDBi | O59744 |
SMRi | O59744 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 276790, 2 interactors |
STRINGi | 4896.SPBC530.08.1 |
PTM databases
iPTMneti | O59744 |
Proteomic databases
MaxQBi | O59744 |
PaxDbi | O59744 |
Genome annotation databases
EnsemblFungii | SPBC530.08.1; SPBC530.08.1:pep; SPBC530.08 |
GeneIDi | 2540259 |
KEGGi | spo:SPBC530.08 |
Organism-specific databases
PomBasei | SPBC530.08 |
VEuPathDBi | FungiDB:SPBC530.08 |
Phylogenomic databases
eggNOGi | ENOG502QSY2, Eukaryota |
HOGENOMi | CLU_373452_0_0_1 |
InParanoidi | O59744 |
OMAi | YYFHFAN |
PhylomeDBi | O59744 |
Miscellaneous databases
PROi | PR:O59744 |
Family and domain databases
CDDi | cd00067, GAL4, 1 hit |
Gene3Di | 4.10.240.10, 1 hit |
InterProi | View protein in InterPro IPR007219, Transcription_factor_dom_fun IPR001138, Zn2-C6_fun-type_DNA-bd IPR036864, Zn2-C6_fun-type_DNA-bd_sf |
Pfami | View protein in Pfam PF04082, Fungal_trans, 1 hit PF00172, Zn_clus, 1 hit |
SMARTi | View protein in SMART SM00906, Fungal_trans, 1 hit SM00066, GAL4, 1 hit |
SUPFAMi | SSF57701, SSF57701, 1 hit |
PROSITEi | View protein in PROSITE PS00463, ZN2_CY6_FUNGAL_1, 1 hit PS50048, ZN2_CY6_FUNGAL_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YN28_SCHPO | |
Accessioni | O59744Primary (citable) accession number: O59744 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 13, 2007 |
Last sequence update: | August 1, 1998 | |
Last modified: | May 25, 2022 | |
This is version 124 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Fungal Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Schizosaccharomyces pombe
Schizosaccharomyces pombe: entries and gene names