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Protein
Submitted name:

Nonstructural protein Rep78

Gene
N/A
Organism
Adeno-associated virus - 6
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nonstructural protein Rep78Imported
OrganismiAdeno-associated virus - 6Imported
Taxonomic identifieri68558 [NCBI]
Taxonomic lineageiVirusesssDNA virusesParvoviridaeParvovirinaeDependoparvovirus
Proteomesi
  • UP000119472 Componenti: Genome

Structurei

3D structure databases

ProteinModelPortaliO56136
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini296 – 463SF3 helicaseInterPro annotationAdd BLAST168

Family and domain databases

InterProiView protein in InterPro
IPR014015 Helicase_SF3_DNA-vir
IPR027417 P-loop_NTPase
IPR001257 Parvovirus_NS1_helicase
IPR014835 Rep_N
PfamiView protein in Pfam
PF01057 Parvo_NS1, 1 hit
PF08724 Rep_N, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51206 SF3_HELICASE_1, 1 hit

Sequencei

Sequence statusi: Complete.

O56136-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPGFYEIVIK VPSDLDEHLP GISDSFVNWV AEKEWELPPD SDMDLNLIEQ
60 70 80 90 100
APLTVAEKLQ RDFLVQWRRV SKAPEALFFV QFEKGESYFH LHILVETTGV
110 120 130 140 150
KSMVLGRFLS QIRDKLVQTI YRGIEPTLPN WFAVTKTRNG AGGGNKVVDE
160 170 180 190 200
CYIPNYLLPK TQPELQWAWT NMEEYISACL NLAERKRLVA HDLTHVSQTQ
210 220 230 240 250
EQNKENLNPN SDAPVIRSKT SARYMELVGW LVDRGITSEK QWIQEDQASY
260 270 280 290 300
ISFNAASNSR SQIKAALDNA GKIMALTKSA PDYLVGPAPP ADIKTNRIYR
310 320 330 340 350
ILELNGYDPA YAGSVFLGWA QKRFGKRNTI WLFGPATTGK TNIAEAIAHA
360 370 380 390 400
VPFYGCVNWT NENFPFNDCV DKMVIWWEEG KMTAKVVESA KAILGGSKVR
410 420 430 440 450
VDQKCKSSAQ IDPTPVIVTS NTNMCAVIDG NSTTFEHQQP LQDRMFKFEL
460 470 480 490 500
TRRLEHDFGK VTKQEVKEFF RWAQDHVTEV AHEFYVRKGG ANKRPAPDDA
510 520 530 540 550
DKSEPKRACP SVADPSTSDA EGAPVDFADR YQNKCSRHAG MLQMLFPCKT
560 570 580 590 600
CERMNQNFNI CFTHGTRDCS ECFPGVSESQ PVVRKRTYRK LCAIHHLLGR
610 620
APEIACSACD LVNVDLDDCV SEQ
Length:623
Mass (Da):70,324
Last modified:June 1, 1998 - v1
Checksum:i0AAD02A104BF56B8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF028704 Genomic DNA Translation: AAB95449.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF028704 Genomic DNA Translation: AAB95449.1

3D structure databases

ProteinModelPortaliO56136
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR014015 Helicase_SF3_DNA-vir
IPR027417 P-loop_NTPase
IPR001257 Parvovirus_NS1_helicase
IPR014835 Rep_N
PfamiView protein in Pfam
PF01057 Parvo_NS1, 1 hit
PF08724 Rep_N, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51206 SF3_HELICASE_1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiO56136_9VIRU
AccessioniPrimary (citable) accession number: O56136
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: April 12, 2017
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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