Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

UniProtKB - O55147 (O55147_RAT)

Entry version 145 (07 Oct 2020)
Sequence version 1 (01 Jun 1998)
Previous versions | rss
Add a publicationFeedback
Protein
Submitted name:

Rattus norvegicus utrophin

Gene

Utrn

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi382Magnesium; via carbonyl oxygenCombined sources1
Metal bindingi384MagnesiumCombined sources1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionActin-bindingUniRule annotationARBA annotation
LigandCalciumARBA annotation, MagnesiumCombined sources, Metal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Rattus norvegicus utrophinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:UtrnImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus

Organism-specific databases

Rat genome database

More...RGDi		3947, Utrn

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell junction, Cell membraneUniRule annotationARBA annotation, Cytoplasm, CytoskeletonUniRule annotationARBA annotation, Membrane, Postsynaptic cell membraneUniRule annotationARBA annotation, Synapse

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		O55147

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		O55147

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		O55147, RN

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

CORUM comprehensive resource of mammalian protein complexes

More...CORUMi		O55147

Protein interaction database and analysis system

More...IntActi		O55147, 2 interactors

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		O55147

Database of comparative protein structure models

More...ModBasei		Search...

Protein Data Bank in Europe - Knowledge Base

More...PDBe-KBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini31 – 135Calponin-homology (CH)InterPro annotationAdd BLAST105
Domaini150 – 255Calponin-homology (CH)InterPro annotationAdd BLAST106
Domaini2799 – 2832WWInterPro annotationAdd BLAST34
Domaini3051 – 3098ZZ-typeInterPro annotationAdd BLAST48

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni2616 – 2640DisorderedSequence analysisAdd BLAST25
Regioni3278 – 3298DisorderedSequence analysisAdd BLAST21
Regioni3344 – 3395DisorderedSequence analysisAdd BLAST52

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili453 – 476Sequence analysisAdd BLAST24
Coiled coili573 – 593Sequence analysisAdd BLAST21
Coiled coili793 – 813Sequence analysisAdd BLAST21
Coiled coili879 – 906Sequence analysisAdd BLAST28
Coiled coili1099 – 1147Sequence analysisAdd BLAST49
Coiled coili1161 – 1181Sequence analysisAdd BLAST21
Coiled coili1377 – 1397Sequence analysisAdd BLAST21
Coiled coili1532 – 1552Sequence analysisAdd BLAST21
Coiled coili1690 – 1710Sequence analysisAdd BLAST21
Coiled coili1900 – 1920Sequence analysisAdd BLAST21
Coiled coili2246 – 2266Sequence analysisAdd BLAST21
Coiled coili2472 – 2492Sequence analysisAdd BLAST21
Coiled coili2538 – 2572Sequence analysisAdd BLAST35
Coiled coili2680 – 2700Sequence analysisAdd BLAST21
Coiled coili3240 – 3277Sequence analysisAdd BLAST38
Coiled coili3312 – 3342Sequence analysisAdd BLAST31

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi2620 – 2640PolyampholyteSequence analysisAdd BLAST21
Compositional biasi3344 – 3373PolarSequence analysisAdd BLAST30

Keywords - Domaini

Coiled coilSequence analysis, RepeatARBA annotation, Zinc-fingerPROSITE-ProRule annotationARBA annotation

Family and domain databases

Conserved Domains Database

More...CDDi		cd00014, CH, 2 hits
cd00201, WW, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.10.418.10, 2 hits
3.30.60.90, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR001589, Actinin_actin-bd_CS
IPR001715, CH-domain
IPR036872, CH_dom_sf
IPR035436, Dystrophin/utrophin
IPR011992, EF-hand-dom_pair
IPR015153, EF-hand_dom_typ1
IPR015154, EF-hand_dom_typ2
IPR018159, Spectrin/alpha-actinin
IPR002017, Spectrin_repeat
IPR001202, WW_dom
IPR036020, WW_dom_sf
IPR000433, Znf_ZZ
IPR043145, Znf_ZZ_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00307, CH, 2 hits
PF09068, EF-hand_2, 1 hit
PF09069, EF-hand_3, 1 hit
PF00435, Spectrin, 8 hits
PF00397, WW, 1 hit
PF00569, ZZ, 1 hit

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF002341, Dystrophin/utrophin, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00033, CH, 2 hits
SM00150, SPEC, 19 hits
SM00456, WW, 1 hit
SM00291, ZnF_ZZ, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF47473, SSF47473, 2 hits
SSF47576, SSF47576, 1 hit
SSF51045, SSF51045, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00019, ACTININ_1, 1 hit
PS00020, ACTININ_2, 1 hit
PS50021, CH, 2 hits
PS01159, WW_DOMAIN_1, 1 hit
PS50020, WW_DOMAIN_2, 1 hit
PS01357, ZF_ZZ_1, 1 hit
PS50135, ZF_ZZ_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

O55147-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKYGHLEAS PDDGQNQFSD IIKSRSDEHN DVQKKTFTKW INARFSKSGK 
        60         70         80         90        100
PPINDMFSDL KDGRKLLDLL EGLTGTSLPK ERGSTRVHAL NNVNRVLQVL 
       110        120        130        140        150
HQNNVELVNI GGTDIVDGNP KLTLGLLWSI ILHWQVKDVM KDIMSDLQQT 
       160        170        180        190        200
NSEKILLSWV RQTTRPYSQV NVLNFTTSWT DGLAFNAVLH RHKPDLFSWD 
       210        220        230        240        250
RVVKMSPTER LEHAFSKAHT YLGIEKLLDP EDVAVQLPDK KSIIMYLTSL 
       260        270        280        290        300
FEVLPQQVTI DAIREVETLP RKYKKECEGE EINIQSAVLT EEGQSPRAET 
       310        320        330        340        350
PSTVTEVDMD LDSYQIALEE VLTWLLSAED TFQEQDDISD DVEDVKEQFA 
       360        370        380        390        400
THETFMMELS AHQSSVGSVL QAGNQLMTQG TLSDEEEFEI QEQMTLLNAR 
       410        420        430        440        450
WEALRVESME RQSRLHDALM ELQKKQLQQL SGWLTLTEER IQKMESLPVG 
       460        470        480        490        500
DDLPSLQNLL EEHKSLQSDL EAEQVKVNSL THMVVIVDEN SGESATAVLE 
       510        520        530        540        550
DQLQKLGERW TAVCRWTEER WNRLQEINIL WQELLEEQCL LEAWLTEKEE 
       560        570        580        590        600
ALNKVQTGNF KDQKELGVSV RRLAILKEDM EMKRQTLDQL SEIGQDVGQL 
       610        620        630        640        650
LSNPKASEKM NSDSEELTQR WDSLVQRLED SSNQVTQAVA KLGMSQIPQK 
       660        670        680        690        700
DLLETVHVRE QGMIKKPKQE LPPPPPPKKR QIHVDVEAKK KFDATSAELQ 
       710        720        730        740        750
SWILRSKAAL QNTEMNEYKK SQETSGVRKK WKGLEKEQKE KIPQLDELNQ 
       760        770        780        790        800
TGQILQEQMG KEGLLAEEIN DVLERVLLEW KMISQQLEDL GRKIQLQEDI 
       810        820        830        840        850
NAYFRQLDAL EKTIRAKEEW LRDASFSESP QRSLPSLKDS CQRELTDLLG 
       860        870        880        890        900
LHPRIEILCA SCSALRSQPS VPGFVQQGFD DLRRHYQAVQ KALEEYQQQL 
       910        920        930        940        950
ENELKSQPEP AYLDTLNTLK KMLSESEKAA QASLSALNDP SAVEQALQEK 
       960        970        980        990       1000
KALDETLENQ KPTLHKLSEE TKALEKNMLP DVGKTYRQEF DDAQGKWNKV 
      1010       1020       1030       1040       1050
KTKVSRDLRS LEEIIPRLRD FKADSEVIEK WTNGVKDFLM KEQAAQGDTT 
      1060       1070       1080       1090       1100
ALQRQLDQCT TFANEIETIE SSLKNLRDIE TSLQRCPVTG VKTWVQTRLA 
      1110       1120       1130       1140       1150
DYQSQLEKFS QEIDIQKSRL SDSQEKAMNL KKDLAEMQEW MAQAEEDYLE 
      1160       1170       1180       1190       1200
RDFEYKSPEE LESAVEEMKR AKEDVLQKEV RVKILKDSIK LVAARVPSGG 
      1210       1220       1230       1240       1250
QELTSEFNEV LESYQLLCNR IRGKCHTLEE VWSCWVELLH YLDLETAWLN 
      1260       1270       1280       1290       1300
TLEERMQSTE ALPERAEAVH DALESLESVL RHPADNRTQI RELGQTLIDG 
      1310       1320       1330       1340       1350
GILDDIISEK LEAFNSRYEE LSHLAESKQI SLEKQLQVLR ETDHMLQVLK 
      1360       1370       1380       1390       1400
ESLGELDKQL TTYLTDRIDA FQLPQEAQKI QAEISAHELT LEELKKNVRP 
      1410       1420       1430       1440       1450
QPPTSPEGRT TRGGSQMDLL QRKLREVSTK FQLFQKPANF EQRMLDCKRV 
      1460       1470       1480       1490       1500
LDGVKAELHV LSVKDVDPDV IQTHLDKCMK LYKTLSEVKL EVETVIKTGR 
      1510       1520       1530       1540       1550
HIVQKQQTDN PKGMDEQLTS LKVLYNDLGA QVTEGKQDLE RASQLSRKLK 
      1560       1570       1580       1590       1600
KEAAILSEWL STTEAELVQK SASEGVIGDL DTEISWAKNI LKDLEKRKVD 
      1610       1620       1630       1640       1650
LNTITESSAA LQHLVVGSES VLEDTLCVLN AGWSRVRTWT EDWRNTLLNH 
      1660       1670       1680       1690       1700
QNQLEVFDGH VAHISTCLYQ AEALLDEIEK KPASKQEEIV KRLLSELSDA 
      1710       1720       1730       1740       1750
SIQVENVREQ AIVLVNARGS SSRELVEPKL AELGKNFEKV SQHINSAQML 
      1760       1770       1780       1790       1800
IGQDPAGTVE AVGPFSDLES LESDIENMLK VVEKHLDPSN DEKMDEERAQ 
      1810       1820       1830       1840       1850
IEEVLQRGEH LLHEPMEDSK KEKIRLQLLL LHTRYNKIKA IPQRKTIPLS 
      1860       1870       1880       1890       1900
SGIMSSALPA DYLVEINKIL LTLDDIELSL NIPELNTTVY EDFSFQEDSL 
      1910       1920       1930       1940       1950
KRIKDQLDRL GEQLAAVHEK QPDVILEASG PEAIQIRDML SQLNAKWDRV 
      1960       1970       1980       1990       2000
NRLYSDRRGS FARAVEEWKQ FHCDLDDLTQ WLSEAEDLLV GTCAPDGSLD 
      2010       2020       2030       2040       2050
LEKARTHQLE LEDGLSSHQP CLIDVNQKGE DIVQRLRPSD ASFLKDKLAS 
      2060       2070       2080       2090       2100
LNQRWSALVA EVKDLQPRLK GESKQVSGYR KRLDEVVCWL TKVENSVQKR 
      2110       2120       2130       2140       2150
STPDPEENPW ELTDLAQEMD AQAENIKWLN RAELEMLSDK NLSLCERDNL 
      2160       2170       2180       2190       2200
SESLRNVNTM WTKICREVPS LLKTRTQDPC SAPQTRIAAH PNVQKVALVS 
      2210       2220       2230       2240       2250
SASDAPLRGP EISVPADLDK TITELADWLV LIDQMLKSNI VTVGDVKEIN 
      2260       2270       2280       2290       2300
KTVSRMKITK ADLEQRHPQL DFVFTLAQNL KNKASSSDLR TAITGKLEKL 
      2310       2320       2330       2340       2350
KTQWESTQHG VELRRQQLED MVVDSLQWDD HREETEELMR KHEARFYMLQ 
      2360       2370       2380       2390       2400
QARRDPLSKQ VSDNQLLLQE LGSGDGVIMA FDNVLQKLLE EYSSDDTRNV 
      2410       2420       2430       2440       2450
EETTEYLKTS WINLKQSIAD RQSALEAELR TVQTSRRDLE NFVKWLQEAE 
      2460       2470       2480       2490       2500
TTANVLADAS QRENALQDSV LARQLRQQML DIQAEIDAHN DIFKSIDGNR 
      2510       2520       2530       2540       2550
QKMVKALGNS EEATMLQHRL DDMNQRWNDL KAKSASIRAH LEASAEKWNR 
      2560       2570       2580       2590       2600
LLASLEELIK WLNMKDEELK KQMPIGGDVP ALQLQYDHCK VLRRELKEKE 
      2610       2620       2630       2640       2650
YSVLNAVDQA RVFLADQPIE APEEPRRNPQ SKTELTPEER AQKIAKAMRK 
      2660       2670       2680       2690       2700
QSSEVREKWE SLNAVTSTWQ KQVGKALEKL RDLQGAVDDL DADMKEVEAV 
      2710       2720       2730       2740       2750
RNGWKPVGDL LIDSLQDHIE KTLAFREEIA PINLKVKTMN DLSSQLSPLD 
      2760       2770       2780       2790       2800
LHPSPKMSRQ LDDLNMRWKL LQVSVEDRLK QLQEAHRDFG PCSQHFLSTS 
      2810       2820       2830       2840       2850
VQLPWQRSIS HNKVPYYINH QTQTTCWDHP KMTELFQSLG DLNNVRFSAY 
      2860       2870       2880       2890       2900
RTAIKIRRLQ KALCLDLLEL NTTNEVFKQH KLNQNDQLLS VPDVINCLTT 
      2910       2920       2930       2940       2950
TYDGLEQLHK DLVNVPLCVD MCLNWLLNVY DTGRTGKIRV QSLKIGLMSL 
      2960       2970       2980       2990       3000
SKGLLEEKYR CLFKEVAGPT EMCDQRQLGL LLHDAIQIPR QLGEVAAFGG 
      3010       3020       3030       3040       3050
SNIEPSVRSC FQQNNNKPEI SVKEFIDWMR LEPQSMVWLP VLHRVAAAET 
      3060       3070       3080       3090       3100
AKHQAKCNIC KECPIVGFRY RSLKHFNYDV CQSCFFSGRT AKGHKLHYPM 
      3110       3120       3130       3140       3150
VEYCIPTTSG EDVRDFTKVL KNKFRSKKYF AKHPRLGYLP VQTVLEGDNL 
      3160       3170       3180       3190       3200
ETPITLISMW PEHYDPSQSP QLFHDDTHSR IEQYATRLAQ MERTNGSFLT 
      3210       3220       3230       3240       3250
DSSSTTGSVE DEHALIQQYC QTLGGESPVS QPQSPAQILK SVEKEERGEL 
      3260       3270       3280       3290       3300
ERIIADLEEE QRNLQVEYEQ LKEQHLRRGL PLGSPPDSIV SPHHTSEDSE 
      3310       3320       3330       3340       3350
LIAEAKLLRQ HKGRLEARMQ ILEDHNKQLE SQLHRLRQLL EQPDSDSRIN 
      3360       3370       3380       3390       3400
GVSPWASPQH PSLSYSLDPD PGPQSHQAAS EDLLAPPHDT STDLTDVMEQ 
      3410 
LNSTFPSCSP NVPSRPQAI
Length:3,419
Mass (Da):391,075
Last modified:June 1, 1998 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i74CF4ECC19EC5E63
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AJ002967 mRNA Translation: CAA05775.1

NCBI Reference Sequences

More...RefSeqi		NP_037202.1, NM_013070.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		25600

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		rno:25600

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ002967 mRNA Translation: CAA05775.1
RefSeqiNP_037202.1, NM_013070.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3UULX-ray1.95A/B308-425[»]
3UUMX-ray2.00A/B308-430[»]
SMRiO55147
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

CORUMiO55147
IntActiO55147, 2 interactors

PTM databases

iPTMnetiO55147
PhosphoSitePlusiO55147

Genome annotation databases

GeneIDi25600
KEGGirno:25600

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		7402
RGDi3947, Utrn

Gene expression databases

GenevisibleiO55147, RN

Family and domain databases

CDDicd00014, CH, 2 hits
cd00201, WW, 1 hit
Gene3Di1.10.418.10, 2 hits
3.30.60.90, 1 hit
InterProiView protein in InterPro
IPR001589, Actinin_actin-bd_CS
IPR001715, CH-domain
IPR036872, CH_dom_sf
IPR035436, Dystrophin/utrophin
IPR011992, EF-hand-dom_pair
IPR015153, EF-hand_dom_typ1
IPR015154, EF-hand_dom_typ2
IPR018159, Spectrin/alpha-actinin
IPR002017, Spectrin_repeat
IPR001202, WW_dom
IPR036020, WW_dom_sf
IPR000433, Znf_ZZ
IPR043145, Znf_ZZ_sf
PfamiView protein in Pfam
PF00307, CH, 2 hits
PF09068, EF-hand_2, 1 hit
PF09069, EF-hand_3, 1 hit
PF00435, Spectrin, 8 hits
PF00397, WW, 1 hit
PF00569, ZZ, 1 hit
PIRSFiPIRSF002341, Dystrophin/utrophin, 3 hits
SMARTiView protein in SMART
SM00033, CH, 2 hits
SM00150, SPEC, 19 hits
SM00456, WW, 1 hit
SM00291, ZnF_ZZ, 1 hit
SUPFAMiSSF47473, SSF47473, 2 hits
SSF47576, SSF47576, 1 hit
SSF51045, SSF51045, 1 hit
PROSITEiView protein in PROSITE
PS00019, ACTININ_1, 1 hit
PS00020, ACTININ_2, 1 hit
PS50021, CH, 2 hits
PS01159, WW_DOMAIN_1, 1 hit
PS50020, WW_DOMAIN_2, 1 hit
PS01357, ZF_ZZ_1, 1 hit
PS50135, ZF_ZZ_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiO55147_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O55147
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: October 7, 2020
This is version 145 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again