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Protein
Submitted name:

Probable transcriptional regulator

Gene

SCO5914

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi20 – 39H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO5914Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5914

Structurei

3D structure databases

ProteinModelPortaliO54110
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 60HTH lysR-typeInterPro annotationAdd BLAST58

Phylogenomic databases

HOGENOMiHOG000233514
InParanoidiO54110
OMAiRMICAIA
OrthoDBiPOG091H0CHD
PhylomeDBiO54110

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

O54110-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MELELRHLRV LCAIADAGGV GRAAAALGYT QPAMSTQLRR IEGLLGEGVF
60 70 80 90 100
LRSSAGVELT AYGAQVVGRA REILALSDNL ARLRPPRSSG ATRRLRLGAI
110 120 130 140 150
NTPVVPTLLD VLREACPDLT VSVSSVYATG ELIDLLEAGE LDVALGCDYP
160 170 180 190 200
GLPLRHSPKL DHRAIRTVPV FVATPADHPL AHRLEVSLAD LSEDAWFVSA
210 220 230 240 250
DDGVGWPGAF YDACGAAGFR PAVTHEFHML DQLQSMIAKG LGVAAVQPTM
260 270 280 290 300
RPVGGVLVKP LAGDPLWQRH LLVWRRDSVE ASAVEVVHHH AVRAHWQLLS
310 320 330
QAPHFQKWVT RAYAPARPTN GAGKALPGTV
Length:330
Mass (Da):35,358
Last modified:June 1, 1998 - v1
Checksum:i61FED591DBDCCA9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939125 Genomic DNA Translation: CAA16451.1
PIRiT34586
RefSeqiNP_630032.1, NC_003888.3
WP_011030530.1, NC_003888.3

Genome annotation databases

EnsemblBacteriaiCAA16451; CAA16451; CAA16451
GeneIDi1101356
KEGGisco:SCO5914
PATRICifig|100226.15.peg.6011

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939125 Genomic DNA Translation: CAA16451.1
PIRiT34586
RefSeqiNP_630032.1, NC_003888.3
WP_011030530.1, NC_003888.3

3D structure databases

ProteinModelPortaliO54110
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO5914

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA16451; CAA16451; CAA16451
GeneIDi1101356
KEGGisco:SCO5914
PATRICifig|100226.15.peg.6011

Phylogenomic databases

HOGENOMiHOG000233514
InParanoidiO54110
OMAiRMICAIA
OrthoDBiPOG091H0CHD
PhylomeDBiO54110

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiO54110_STRCO
AccessioniPrimary (citable) accession number: O54110
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: September 12, 2018
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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