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Entry version 96 (07 Apr 2021)
Sequence version 1 (01 Jun 1998)
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Protein
Submitted name:

ArsR family transcriptional regulator

Gene

nolR

Organism
Rhizobium leguminosarum
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
ArsR family transcriptional regulatorImported
Submitted name:
Bacterial regulatory protein, arsR family proteinImported
Submitted name:
Metalloregulator ArsR/SmtB family transcription factorImported
Submitted name:
Nodulation repressorImported
Submitted name:
NolR proteinImported
Submitted name:
Transcriptional regulatorImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:nolRImported
ORF Names:A4A59_30830Imported, B5P46_16815Imported, BA011_13665Imported, CUJ84_Chr003430Imported, DLJ82_1706Imported, EHI44_13090Imported, ELG94_17945Imported, ELH90_19460Imported, ELI03_15925Imported, GR232_30135Imported, GR236_26835Imported, GUK36_15050Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRhizobium leguminosarumImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri384 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000238523 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome
  • UP000292974 Componenti: Unassembled WGS sequence
  • UP000468594 Componenti: Unassembled WGS sequence
  • UP000291892 Componenti: Unassembled WGS sequence
  • UP000076193 Componenti: Unassembled WGS sequence
  • UP000251166 Componenti: Chromosome
  • UP000471409 Componenti: Unassembled WGS sequence
  • UP000293652 Componenti: Unassembled WGS sequence
  • UP000092691 Componenti: Chromosome
  • UP000288119 Componenti: Unassembled WGS sequence
  • UP000470052 Componenti: Unassembled WGS sequence
  • UP000290767 Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini6 – 99HTH arsR-typeInterPro annotationAdd BLAST94

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00090, HTH_ARSR, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011991, ArsR-like_HTH
IPR001845, HTH_ArsR_DNA-bd_dom
IPR036388, WH-like_DNA-bd_sf
IPR036390, WH_DNA-bd_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01022, HTH_5, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00778, HTHARSR

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00418, HTH_ARSR, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46785, SSF46785, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50987, HTH_ARSR_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

O54057-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
METSDLADHT NVAAALLSAM ANPKRLLILC SLVKGEVAVG VLATQVGLSQ
60 70 80 90 100
SALSQHLSKL RAQKLVKTRR DAQTIYYSST SEPVMKILAT LEDIYLVQNR

NRSAA
Length:105
Mass (Da):11,368
Last modified:June 1, 1998 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF861C4DD61F73425
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
EU416274 Genomic DNA Translation: ABZ04159.1
CP016286 Genomic DNA Translation: ANP86672.1
CP025012 Genomic DNA Translation: AUW43767.1
CP030760 Genomic DNA Translation: AXA39308.1
AJ001934 Genomic DNA Translation: CAA05107.1
LVYU01000131 Genomic DNA Translation: KZA97629.1
WUEW01000030 Genomic DNA Translation: NEI31108.1
WUFU01000013 Genomic DNA Translation: NEK11474.1
WXXP01000006 Genomic DNA Translation: NEK50746.1
SBJE01000006 Genomic DNA Translation: RWY87973.1
MZMU01000012 Genomic DNA Translation: RXT23620.1
SIPC01000001 Genomic DNA Translation: TAX73136.1
SIOP01000001 Genomic DNA Translation: TAY53655.1
SIKX01000001 Genomic DNA Translation: TBF20085.1

NCBI Reference Sequences

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RefSeqi
WP_003561417.1, NZ_WXXQ01000010.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ANP86672; ANP86672; BA011_13665
AUW43767; AUW43767; CUJ84_Chr003430
AXA39308; AXA39308; DLJ82_1706
KZA97629; KZA97629; A4A59_30830

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
57673502

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU416274 Genomic DNA Translation: ABZ04159.1
CP016286 Genomic DNA Translation: ANP86672.1
CP025012 Genomic DNA Translation: AUW43767.1
CP030760 Genomic DNA Translation: AXA39308.1
AJ001934 Genomic DNA Translation: CAA05107.1
LVYU01000131 Genomic DNA Translation: KZA97629.1
WUEW01000030 Genomic DNA Translation: NEI31108.1
WUFU01000013 Genomic DNA Translation: NEK11474.1
WXXP01000006 Genomic DNA Translation: NEK50746.1
SBJE01000006 Genomic DNA Translation: RWY87973.1
MZMU01000012 Genomic DNA Translation: RXT23620.1
SIPC01000001 Genomic DNA Translation: TAX73136.1
SIOP01000001 Genomic DNA Translation: TAY53655.1
SIKX01000001 Genomic DNA Translation: TBF20085.1
RefSeqiWP_003561417.1, NZ_WXXQ01000010.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiANP86672; ANP86672; BA011_13665
AUW43767; AUW43767; CUJ84_Chr003430
AXA39308; AXA39308; DLJ82_1706
KZA97629; KZA97629; A4A59_30830
GeneIDi57673502

Family and domain databases

CDDicd00090, HTH_ARSR, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR011991, ArsR-like_HTH
IPR001845, HTH_ArsR_DNA-bd_dom
IPR036388, WH-like_DNA-bd_sf
IPR036390, WH_DNA-bd_sf
PfamiView protein in Pfam
PF01022, HTH_5, 1 hit
PRINTSiPR00778, HTHARSR
SMARTiView protein in SMART
SM00418, HTH_ARSR, 1 hit
SUPFAMiSSF46785, SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50987, HTH_ARSR_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiO54057_RHILE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O54057
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: April 7, 2021
This is version 96 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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