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Protein

HTH-type transcriptional regulator ArgP

Gene

argP

Organism
Edwardsiella ictaluri (strain 93-146)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Controls the transcription of genes involved in arginine and lysine metabolism.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi21 – 40H-T-H motifUniRule annotationAdd BLAST20

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEICT634503:G1GVC-3069-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator ArgPUniRule annotation
Gene namesi
Name:argPUniRule annotation
Synonyms:iciA
Ordered Locus Names:NT01EI_3363
OrganismiEdwardsiella ictaluri (strain 93-146)
Taxonomic identifieri634503 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesHafniaceaeEdwardsiella
Proteomesi
  • UP000001485 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001056441 – 297HTH-type transcriptional regulator ArgPAdd BLAST297

Proteomic databases

PRIDEiO52399

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi634503.NT01EI_3363

Structurei

3D structure databases

ProteinModelPortaliO52399
SMRiO52399
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 60HTH lysR-typeUniRule annotationAdd BLAST57

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CXD Bacteria
COG0583 LUCA
HOGENOMiHOG000219802
KOiK05596
OMAiSTCCMIP
OrthoDBiPOG091H09MH

Family and domain databases

Gene3Di1.10.10.10, 1 hit
HAMAPiMF_00513 HTH_type_ArgP, 1 hit
InterProiView protein in InterPro
IPR017685 ArgP
IPR023490 ArgP_Gammaproteobact
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
TIGRFAMsiTIGR03298 argP, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

O52399-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKRPDYRTLQ ALDAVIRERG FERAAQKLCI TQSAVSQRIK QLENLFGQPL
60 70 80 90 100
LVRTVPPRPT EQGQRLLALL HQVELLEEEW LGNDNSSDGP LLLSLAVNAD
110 120 130 140 150
SLATWLLPAL KPVLADSPLR LNLQVEDESR TQERLRRGEV VGAVSLQPQP
160 170 180 190 200
LPSCLVDRLG ALDYLFCASP AFAARYFPNG VTRSSLLKAP AVAFDHLDDM
210 220 230 240 250
HQAFLQQNFE LPPGSVPCHI VNSSEAFVQL ALQGTTCCML PHLQVERELR
260 270 280 290
KGVLIDLTPG MVQRRMLYWH RFAPESRLMR RVTDALISHG RDVLRQD
Length:297
Mass (Da):33,393
Last modified:June 1, 1998 - v1
Checksum:i93BEC456B2419989
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF037440 Genomic DNA Translation: AAB92569.1
CP001600 Genomic DNA Translation: ACR70500.1
RefSeqiWP_015872573.1, NC_012779.2

Genome annotation databases

EnsemblBacteriaiACR70500; ACR70500; NT01EI_3363
GeneIDi7959662
KEGGieic:NT01EI_3363
PATRICifig|634503.3.peg.2989

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF037440 Genomic DNA Translation: AAB92569.1
CP001600 Genomic DNA Translation: ACR70500.1
RefSeqiWP_015872573.1, NC_012779.2

3D structure databases

ProteinModelPortaliO52399
SMRiO52399
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi634503.NT01EI_3363

Proteomic databases

PRIDEiO52399

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACR70500; ACR70500; NT01EI_3363
GeneIDi7959662
KEGGieic:NT01EI_3363
PATRICifig|634503.3.peg.2989

Phylogenomic databases

eggNOGiENOG4105CXD Bacteria
COG0583 LUCA
HOGENOMiHOG000219802
KOiK05596
OMAiSTCCMIP
OrthoDBiPOG091H09MH

Enzyme and pathway databases

BioCyciEICT634503:G1GVC-3069-MONOMER

Family and domain databases

Gene3Di1.10.10.10, 1 hit
HAMAPiMF_00513 HTH_type_ArgP, 1 hit
InterProiView protein in InterPro
IPR017685 ArgP
IPR023490 ArgP_Gammaproteobact
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
TIGRFAMsiTIGR03298 argP, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiARGP_EDWI9
AccessioniPrimary (citable) accession number: O52399
Secondary accession number(s): C5BAU1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: June 1, 1998
Last modified: November 7, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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