UniProtKB - O49549 (O49549_ARATH)
Protein
Submitted name:
Uncharacterized protein F7J7.10
Gene
F7J7.10
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
GO - Molecular functioni
- zinc ion binding Source: InterPro
GO - Biological processi
- DNA repair Source: InterPro
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Uncharacterized protein F7J7.10Imported |
Gene namesi | Name:F7J7.10Imported |
Organismi | Arabidopsis thaliana (Mouse-ear cress)Imported |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Repeati | 4 – 38 | PPRPROSITE-ProRule annotationAdd BLAST | 35 | |
Repeati | 39 – 73 | PPRPROSITE-ProRule annotationAdd BLAST | 35 | |
Repeati | 74 – 100 | PPRPROSITE-ProRule annotationAdd BLAST | 27 | |
Repeati | 106 – 136 | PPRPROSITE-ProRule annotationAdd BLAST | 31 | |
Repeati | 142 – 172 | PPRPROSITE-ProRule annotationAdd BLAST | 31 | |
Repeati | 208 – 242 | PPRPROSITE-ProRule annotationAdd BLAST | 35 | |
Domaini | 381 – 419 | RING-typeInterPro annotationAdd BLAST | 39 | |
Domaini | 926 – 1051 | PHD-typeInterPro annotationAdd BLAST | 126 | |
Domaini | 1128 – 1209 | BRCTInterPro annotationAdd BLAST | 82 | |
Domaini | 1230 – 1322 | BRCTInterPro annotationAdd BLAST | 93 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 452 – 893 | DisorderedSequence analysisAdd BLAST | 442 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 1291 – 1311 | Sequence analysisAdd BLAST | 21 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 462 – 500 | PolyampholyteSequence analysisAdd BLAST | 39 | |
Compositional biasi | 514 – 535 | PolarSequence analysisAdd BLAST | 22 | |
Compositional biasi | 536 – 561 | PolyampholyteSequence analysisAdd BLAST | 26 | |
Compositional biasi | 570 – 584 | PolyampholyteSequence analysisAdd BLAST | 15 | |
Compositional biasi | 585 – 607 | PolarSequence analysisAdd BLAST | 23 | |
Compositional biasi | 608 – 624 | PolyampholyteSequence analysisAdd BLAST | 17 | |
Compositional biasi | 689 – 728 | PolarSequence analysisAdd BLAST | 40 | |
Compositional biasi | 742 – 759 | PolarSequence analysisAdd BLAST | 18 | |
Compositional biasi | 800 – 822 | PolyampholyteSequence analysisAdd BLAST | 23 | |
Compositional biasi | 838 – 853 | PolyampholyteSequence analysisAdd BLAST | 16 | |
Compositional biasi | 854 – 878 | PolarSequence analysisAdd BLAST | 25 | |
Compositional biasi | 879 – 893 | PolyampholyteSequence analysisAdd BLAST | 15 |
Sequence similaritiesi
Keywords - Domaini
Coiled coilSequence analysis, RepeatARBA annotation, Zinc-fingerPROSITE-ProRule annotationARBA annotationFamily and domain databases
Gene3Di | 1.25.40.10, 2 hits 3.30.40.10, 2 hits 3.40.50.10190, 2 hits |
InterProi | View protein in InterPro IPR031099, BRCA1-associated IPR001357, BRCT_dom IPR036420, BRCT_dom_sf IPR032867, DYW_dom IPR034732, EPHD IPR002885, Pentatricopeptide_repeat IPR011990, TPR-like_helical_dom_sf IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD IPR017907, Znf_RING_CS |
PANTHERi | PTHR13763, PTHR13763, 1 hit |
Pfami | View protein in Pfam PF00533, BRCT, 1 hit PF16589, BRCT_2, 1 hit PF14432, DYW_deaminase, 1 hit PF01535, PPR, 4 hits |
SMARTi | View protein in SMART SM00292, BRCT, 2 hits SM00184, RING, 1 hit |
SUPFAMi | SSF52113, SSF52113, 2 hits |
TIGRFAMsi | TIGR00756, PPR, 2 hits |
PROSITEi | View protein in PROSITE PS50172, BRCT, 2 hits PS51805, EPHD, 1 hit PS51375, PPR, 6 hits PS00518, ZF_RING_1, 1 hit PS50089, ZF_RING_2, 1 hit |
i Sequence
Sequence statusi: Fragment.
O49549-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
IKPDGFTIVS LLSACAKIGA LTLGKRVHVY MIKVGLTRNL HSSNVLLDLY
60 70 80 90 100
ARCGRVEEAK TLFDEMVDKN SVSWTSLIVG LAVNGFGKEA IELFKYMEST
110 120 130 140 150
EGLLPCEITF VGILYACSHC GMVKEGFEYF RRMREEYKIE PRIEHFGCMV
160 170 180 190 200
DLLARAGQVK KAYEYIKSMP MQPNVVIWRT LLGACTVHGD SDLAEFARIQ
210 220 230 240 250
ILQLEPNHSG DYVLLSNMYA SEQRWSDVQK IRKQMLRDGV KKVPGHSLVE
260 270 280 290 300
VGNRVHEFLM GDKSHPQSDA IYAKLKEMTG RLRSEGYVPQ ISNVYVDVEE
310 320 330 340 350
EEKENAVVYH SEKIAIAFML ISTPERSPIT VVKNLRVCAD CHLAIKLVSK
360 370 380 390 400
VYNREIVVRD RSRSKMADTS HLERMGRELK CPICLSLYNS AVSLSCNHVF
410 420 430 440 450
CNACIVKSMK MDATCPVCKI PYHRREIRGA PHMDSLVSIY KNMEDASGIK
460 470 480 490 500
LFVSQNNPSP SDKEKQVRDA SVEKASDKNR QGSRKGRASK RNEYGKTKEI
510 520 530 540 550
DVDAPGPIVM KPSSQTKKRV QLLQNLSAES LTKPTESVET AEKPKDYTEN
560 570 580 590 600
TVIRLDEHPS LNKEGNLSPF FWLRDEDDGE NSSQRTESDQ LLGTTPVNVP
610 620 630 640 650
SFSDLMDSDH ESPSKEDEQQ KPNPGDMFDS EMFEWTQRPC SPEILPSPVK
660 670 680 690 700
AKVLGRDEID LTQKKLPKVK VASSKCKNRK AGSARNTVAR RSIGVSQEDN
710 720 730 740 750
MESSAAATIS EQQDSRGTSG TIIRNDVNTD ENVKAKRATR SKAQSTRVQS
760 770 780 790 800
DLNVSNEADG KQGTKRKRSS IKSSPAHPIA GPNELSLGTE IVGKGDQDQA
810 820 830 840 850
HGPSDTHPEK RSPTEKPSLK KRGRKSNASS SLKDLSGKTQ KKTSEKKLKL
860 870 880 890 900
DSHMISSKAT QPHGNGILTA GLNQGGDKQD SRNNRKSTVG KDDHTMQVIE
910 920 930 940 950
KCSTINKSSS GGSAHLRRCN GSLTKKFTCA FCQCSEDTEA SGEMTHYYRG
960 970 980 990 1000
EPVSADFNGG SKVIHVHKNC AEWAPNVYFN DLTIVNLDVE LTRSRRISCS
1010 1020 1030 1040 1050
CCGLKGAALG CYNKSCKNSF HVTCAKLIPE CRWDNVSVAY IVEALYSPLH
1060 1070 1080 1090 1100
SSFNTFSYQQ VKFVMLCPLD ASIKLPCEEA NSKDRKCKRT PKEPLHSQPK
1110 1120 1130 1140 1150
QVSGKANIRE LHIKQFHGFS KKLVLSCSGL TVEEKTVIAE FAELSGVTIS
1160 1170 1180 1190 1200
KNWDSTVTHV IASINENGAC KRTLKFMMAI LEGKWILTID WIKACMKNTK
1210 1220 1230 1240 1250
YVSEEPYEIT MDVHGIREGP YLGRQRALKK KPKLFTGLKF YIMGDFELAY
1260 1270 1280 1290 1300
KGYLQDLIVA AGGTILRRRP VSSDDNEAST IVVFSVEPSK KKTLTQRRSD
1310 1320 1330
AEALAKSARA RAASSSWVLD SIAGCQILVL I
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 1 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL021960 Genomic DNA Translation: CAA17526.1 |
PIRi | T04938 |
Genome annotation databases
EnsemblPlantsi | AT4G21065.1; AT4G21065.1; AT4G21065 |
Gramenei | AT4G21065.1; AT4G21065.1; AT4G21065 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL021960 Genomic DNA Translation: CAA17526.1 |
PIRi | T04938 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PRIDEi | O49549 |
Genome annotation databases
EnsemblPlantsi | AT4G21065.1; AT4G21065.1; AT4G21065 |
Gramenei | AT4G21065.1; AT4G21065.1; AT4G21065 |
Gene expression databases
ExpressionAtlasi | O49549, baseline and differential |
Family and domain databases
Gene3Di | 1.25.40.10, 2 hits 3.30.40.10, 2 hits 3.40.50.10190, 2 hits |
InterProi | View protein in InterPro IPR031099, BRCA1-associated IPR001357, BRCT_dom IPR036420, BRCT_dom_sf IPR032867, DYW_dom IPR034732, EPHD IPR002885, Pentatricopeptide_repeat IPR011990, TPR-like_helical_dom_sf IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD IPR017907, Znf_RING_CS |
PANTHERi | PTHR13763, PTHR13763, 1 hit |
Pfami | View protein in Pfam PF00533, BRCT, 1 hit PF16589, BRCT_2, 1 hit PF14432, DYW_deaminase, 1 hit PF01535, PPR, 4 hits |
SMARTi | View protein in SMART SM00292, BRCT, 2 hits SM00184, RING, 1 hit |
SUPFAMi | SSF52113, SSF52113, 2 hits |
TIGRFAMsi | TIGR00756, PPR, 2 hits |
PROSITEi | View protein in PROSITE PS50172, BRCT, 2 hits PS51805, EPHD, 1 hit PS51375, PPR, 6 hits PS00518, ZF_RING_1, 1 hit PS50089, ZF_RING_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | O49549_ARATH | |
Accessioni | O49549Primary (citable) accession number: O49549 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | June 1, 1998 |
Last sequence update: | November 1, 1998 | |
Last modified: | April 7, 2021 | |
This is version 128 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |