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Protein

40S ribosomal protein S26

Gene

rps-26

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

  • cytoplasmic translation Source: UniProtKB
  • determination of adult lifespan Source: WormBase

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S26
Gene namesi
Name:rps-26
ORF Names:F39B2.6
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF39B2.6 ; CE16012 ; WBGene00004495 ; rps-26

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002045181 – 11740S ribosomal protein S26Add BLAST117

Proteomic databases

EPDiO45499
PaxDbiO45499
PeptideAtlasiO45499
PRIDEiO45499

Expressioni

Gene expression databases

BgeeiWBGene00004495

Interactioni

Subunit structurei

Component of the 40S small ribosomal subunit.By similarity

Protein-protein interaction databases

STRINGi6239.F39B2.6.2

Structurei

3D structure databases

ProteinModelPortaliO45499
SMRiO45499
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1768 Eukaryota
COG4830 LUCA
GeneTreeiENSGT00390000002517
HOGENOMiHOG000108824
InParanoidiO45499
KOiK02976
OMAiDKAICVT
OrthoDBiEOG091G19WY
PhylomeDBiO45499

Family and domain databases

Gene3Di3.30.1740.20, 1 hit
InterProiView protein in InterPro
IPR000892 Ribosomal_S26e
IPR038551 Ribosomal_S26e_sf
PANTHERiPTHR12538 PTHR12538, 1 hit
PfamiView protein in Pfam
PF01283 Ribosomal_S26e, 1 hit
PROSITEiView protein in PROSITE
PS00733 RIBOSOMAL_S26E, 1 hit

Sequencei

Sequence statusi: Complete.

O45499-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFKRRNHGR NKKNRGHVAF IRCTNCGRCC PKDKAIKKFV VRNIVEAAAV
60 70 80 90 100
RDIGDASAYT QYALPKLYHK LHYCIACAIH SKVVRNRSRE ARRDRNPPPR
110
FGQRAAAARP GAPGPRP
Length:117
Mass (Da):13,249
Last modified:June 1, 1998 - v1
Checksum:i0FB79092B80B605D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z92834 Genomic DNA Translation: CAB07387.1
PIRiT21988
RefSeqiNP_493571.1, NM_061170.5
UniGeneiCel.18312

Genome annotation databases

EnsemblMetazoaiF39B2.6.1; F39B2.6.1; WBGene00004495
F39B2.6.2; F39B2.6.2; WBGene00004495
F39B2.6.3; F39B2.6.3; WBGene00004495
GeneIDi173342
KEGGicel:CELE_F39B2.6
UCSCiF39B2.6.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRS26_CAEEL
AccessioniPrimary (citable) accession number: O45499
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2003
Last sequence update: June 1, 1998
Last modified: March 28, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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