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Protein

Transgelin

Gene

cpn-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
TransgelinUniRule annotation
Gene namesi
Name:cpn-2Imported
ORF Names:CELE_D1069.2Imported, D1069.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiD1069.2a ; CE38495 ; WBGene00000778 ; cpn-2

PTM / Processingi

Proteomic databases

EPDiO44788
PaxDbiO44788
PeptideAtlasiO44788

Expressioni

Gene expression databases

BgeeiWBGene00000778
ExpressionAtlasiO44788 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi6239.D1069.2.1

Structurei

3D structure databases

ProteinModelPortaliO44788
SMRiO44788
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 138Calponin-homology (CH)InterPro annotationAdd BLAST115

Sequence similaritiesi

Belongs to the calponin family.UniRule annotation

Phylogenomic databases

eggNOGiKOG2046 Eukaryota
COG5199 LUCA
GeneTreeiENSGT00550000074447
HOGENOMiHOG000232113
InParanoidiO44788
KOiK20526
OMAiWFFKKAQ
OrthoDBiEOG091G0LY2

Family and domain databases

CDDicd00014 CH, 1 hit
Gene3Di1.10.418.10, 1 hit
InterProiView protein in InterPro
IPR000557 Calponin_repeat
IPR001715 CH-domain
IPR036872 CH_dom_sf
IPR003096 SM22_calponin
PfamiView protein in Pfam
PF00402 Calponin, 1 hit
PF00307 CH, 1 hit
PRINTSiPR00888 SM22CALPONIN
SMARTiView protein in SMART
SM00033 CH, 1 hit
SUPFAMiSSF47576 SSF47576, 1 hit
PROSITEiView protein in PROSITE
PS01052 CALPONIN_1, 1 hit
PS51122 CALPONIN_2, 1 hit
PS50021 CH, 1 hit

Sequencei

Sequence statusi: Complete.

O44788-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANHGPSYGL SRELQKKNDA RFVLEEAIEV LKWIENVTGE RFSFDVTTCE
60 70 80 90 100
SSTDVSNLLK DGVMLCKLIE KLDPSCRVVY NKKPKMAFPM MENISNFLAA
110 120 130 140 150
AKQFGVMEIS CFQTVDLYEN KQCYKVIECL RLLAAVAQSR SSHLEHPAWV
160 170 180 190 200
VKLAQSSPRQ FPEAVMRRGE MVIPLQYGTN KCASQKGMSP YGLPRQIKPD

PHG
Length:203
Mass (Da):22,921
Last modified:January 25, 2012 - v2
Checksum:i5D17B49922342C14
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA Translation: CCD67128.1
RefSeqiNP_493713.2, NM_061312.3
UniGeneiCel.15589

Genome annotation databases

EnsemblMetazoaiD1069.2a.1; D1069.2a.1; WBGene00000778
D1069.2a.2; D1069.2a.2; WBGene00000778
GeneIDi173424
KEGGicel:CELE_D1069.2
UCSCiD1069.2.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiO44788_CAEEL
AccessioniPrimary (citable) accession number: O44788
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: January 25, 2012
Last modified: May 23, 2018
This is version 114 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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