UniProtKB - O43541 (SMAD6_HUMAN)
Mothers against decapentaplegic homolog 6
SMAD6
Functioni
Transforming growth factor-beta superfamily receptors signaling occurs through the Smad family of intracellular mediators. SMAD6 is an inhibitory Smad (i-Smad) that negatively regulates signaling downstream of type I transforming growth factor-beta (PubMed:9436979, PubMed:16951688, PubMed:22275001, PubMed:9759503, PubMed:10647776, PubMed:10708948, PubMed:10708949, PubMed:30848080).
Acts as a mediator of TGF-beta and BMP anti-inflammatory activities. Suppresses IL1R-TLR signaling through its direct interaction with PEL1, preventing NF-kappa-B activation, nuclear transport and NF-kappa-B-mediated expression of proinflammatory genes (PubMed:16951688).
Blocks the BMP-SMAD1 signaling pathway by competing with SMAD4 for receptor-activated SMAD1-binding (PubMed:9436979, PubMed:30848080).
Binds to regulatory elements in target promoter regions (PubMed:16491121).
4 Publications5 PublicationsSites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 205 | ZincBy similarity | 1 | |
Metal bindingi | 247 | ZincBy similarity | 1 | |
Metal bindingi | 260 | ZincBy similarity | 1 | |
Metal bindingi | 265 | ZincBy similarity | 1 |
GO - Molecular functioni
- chromatin binding Source: UniProtKB
- co-SMAD binding Source: BHF-UCL
- identical protein binding Source: IntAct
- I-SMAD binding Source: BHF-UCL
- metal ion binding Source: UniProtKB-KW
- R-SMAD binding Source: BHF-UCL
- transcription cis-regulatory region binding Source: UniProtKB
- transcription regulator inhibitor activity Source: BHF-UCL
- type I activin receptor binding Source: BHF-UCL
- type I transforming growth factor beta receptor binding Source: BHF-UCL
- ubiquitin protein ligase binding Source: BHF-UCL
GO - Biological processi
- anatomical structure morphogenesis Source: GO_Central
- aorta development Source: Ensembl
- aortic valve morphogenesis Source: BHF-UCL
- BMP signaling pathway Source: UniProtKB
- cell differentiation Source: GO_Central
- cell-substrate adhesion Source: UniProtKB
- coronary vasculature development Source: Ensembl
- fat cell differentiation Source: UniProtKB
- immune response Source: BHF-UCL
- mitral valve morphogenesis Source: BHF-UCL
- negative regulation of apoptotic process Source: BHF-UCL
- negative regulation of BMP signaling pathway Source: BHF-UCL
- negative regulation of cell population proliferation Source: BHF-UCL
- negative regulation of ossification Source: BHF-UCL
- negative regulation of osteoblast differentiation Source: BHF-UCL
- negative regulation of pathway-restricted SMAD protein phosphorylation Source: BHF-UCL
- negative regulation of SMAD protein complex assembly Source: BHF-UCL
- negative regulation of transforming growth factor beta receptor signaling pathway Source: BHF-UCL
- outflow tract septum morphogenesis Source: BHF-UCL
- positive regulation of pri-miRNA transcription by RNA polymerase II Source: Ensembl
- pulmonary valve morphogenesis Source: BHF-UCL
- response to estrogen Source: Ensembl
- response to laminar fluid shear stress Source: BHF-UCL
- response to lipopolysaccharide Source: ARUK-UCL
- SMAD protein signal transduction Source: GO_Central
- transforming growth factor beta receptor signaling pathway Source: GO_Central
- ureteric bud development Source: Ensembl
- ventricular septum development Source: Ensembl
- zygotic specification of dorsal/ventral axis Source: BHF-UCL
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Ligand | Metal-binding, Zinc |
Enzyme and pathway databases
PathwayCommonsi | O43541 |
Reactomei | R-HSA-201451, Signaling by BMP R-HSA-8941326, RUNX2 regulates bone development |
SignaLinki | O43541 |
SIGNORi | O43541 |
Names & Taxonomyi
Protein namesi | Recommended name: Mothers against decapentaplegic homolog 6Short name: MAD homolog 6 Short name: Mothers against DPP homolog 6 Alternative name(s): SMAD family member 6 Short name: SMAD 6 Short name: Smad6 Short name: hSMAD6 |
Gene namesi | Name:SMAD6 Synonyms:MADH6 |
Organismi | Homo sapiens (Human) |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
HGNCi | HGNC:6772, SMAD6 |
MIMi | 602931, gene |
neXtProti | NX_O43541 |
VEuPathDBi | HostDB:ENSG00000137834 |
Subcellular locationi
Nucleus
- Nucleus 1 Publication
Cytosol
- cytosol Source: HPA
Golgi apparatus
- Golgi apparatus Source: HPA
Nucleus
- heteromeric SMAD protein complex Source: GO_Central
- nuclear body Source: HPA
- nucleoplasm Source: HPA
- nucleus Source: UniProtKB
Other locations
- chromatin Source: NTNU_SB
- cytoplasm Source: BHF-UCL
- protein-containing complex Source: MGI
Keywords - Cellular componenti
NucleusPathology & Biotechi
Involvement in diseasei
Aortic valve disease 2 (AOVD2)3 Publications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural variantiVAR_084468 | 14 – 496 | Missing in AOVD2. 1 PublicationAdd BLAST | 483 | |
Natural variantiVAR_084473 | 204 | G → A in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs768542939EnsemblClinVar. | 1 | |
Natural variantiVAR_084475 | 231 | R → G in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1395007983EnsemblClinVar. | 1 | |
Natural variantiVAR_084476 | 231 | R → P in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1419095990EnsemblClinVar. | 1 | |
Natural variantiVAR_084481 | 335 | A → E in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs900988907EnsemblClinVar. | 1 | |
Natural variantiVAR_084485 | 391 | I → IGI in AOVD2; decreased inhibition of BMP signaling pathway. 1 Publication | 1 | |
Natural variantiVAR_068075 | 415 | P → L in AOVD2; decreased inhibition of BMP signaling pathway. 1 PublicationCorresponds to variant dbSNP:rs387907284EnsemblClinVar. | 1 | |
Natural variantiVAR_068076 | 484 | C → F in AOVD2; decreased inhibition of BMP signaling pathway. 2 PublicationsCorresponds to variant dbSNP:rs387907283EnsemblClinVar. | 1 |
Craniosynostosis 7 (CRS7)1 Publication
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural variantiVAR_078924 | 223 – 496 | Missing in CRS7; associated with disease susceptibility. 1 PublicationAdd BLAST | 274 | |
Natural variantiVAR_078925 | 287 | E → K in CRS7; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs570279865EnsemblClinVar. | 1 | |
Natural variantiVAR_077592 | 306 | T → A in CRS7; associated with disease susceptibility. 1 Publication | 1 | |
Natural variantiVAR_077593 | 323 | P → L in CRS7; associated with disease susceptibility. 1 PublicationCorresponds to variant dbSNP:rs1374099442Ensembl. | 1 | |
Natural variantiVAR_078926 | 374 – 496 | Missing in CRS7; associated with disease susceptibility. 1 PublicationAdd BLAST | 123 | |
Natural variantiVAR_077594 | 390 | G → C in CRS7; associated with disease susceptibility; de novo mutation. 1 Publication | 1 | |
Natural variantiVAR_078927 | 407 – 496 | Missing in CRS7; associated with disease susceptibility. 1 PublicationAdd BLAST | 90 | |
Natural variantiVAR_077595 | 465 | R → C in CRS7; associated with disease susceptibility. 1 PublicationCorresponds to variant dbSNP:rs761888345EnsemblClinVar. | 1 | |
Natural variantiVAR_078928 | 490 | I → T in CRS7; associated with disease susceptibility. 1 PublicationCorresponds to variant dbSNP:rs1338294058Ensembl. | 1 |
Radioulnar synostosis, non-syndromic (RUS)1 Publication
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural variantiVAR_084470 | 115 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 382 | |
Natural variantiVAR_084472 | 187 | S → L in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1359442505EnsemblClinVar. | 1 | |
Natural variantiVAR_084474 | 205 | C → S in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1595757271EnsemblClinVar. | 1 | |
Natural variantiVAR_084477 | 267 | S → N in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1396117157EnsemblClinVar. | 1 | |
Natural variantiVAR_084478 | 279 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 218 | |
Natural variantiVAR_084480 | 315 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 182 | |
Natural variantiVAR_084482 | 339 | H → P in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs142278375EnsemblClinVar. | 1 | |
Natural variantiVAR_084483 | 350 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 147 | |
Natural variantiVAR_084484 | 370 | Q → R in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1567115899EnsemblClinVar. | 1 | |
Natural variantiVAR_084486 | 447 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 50 | |
Natural variantiVAR_084487 | 471 | G → D in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1595805424EnsemblClinVar. | 1 |
Mutagenesis
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Mutagenesisi | 173 | K → R: Abolishes monoubiquitination by UBE2O. 1 Publication | 1 | |
Mutagenesisi | 435 | S → A: Loss of in vitro phosphorylation by PRKX. 1 Publication | 1 | |
Mutagenesisi | 471 | G → S: Loss of SMAD1-binding and of inhibition of BMP-SMAD1 signaling. No effect on interaction with BMPR1B and TGFBR1. 1 Publication | 1 | |
Mutagenesisi | 478 – 496 | Missing : Loss of interaction with BMPR1B, TGFBR1 and SMAD1. 1 PublicationAdd BLAST | 19 |
Keywords - Diseasei
Craniosynostosis, Disease variantOrganism-specific databases
DisGeNETi | 4091 |
MalaCardsi | SMAD6 |
MIMi | 179300, phenotype 614823, phenotype 617439, phenotype |
OpenTargetsi | ENSG00000137834 |
Orphaneti | 3269, Congenital radioulnar synostosis 402075, Familial bicuspid aortic valve |
PharmGKBi | PA30529 |
Miscellaneous databases
Pharosi | O43541, Tbio |
Genetic variation databases
BioMutai | SMAD6 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000090869 | 1 – 496 | Mothers against decapentaplegic homolog 6Add BLAST | 496 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 75 | Dimethylated arginine; alternateBy similarity | 1 | |
Modified residuei | 75 | Omega-N-methylarginine; alternateBy similarity | 1 | |
Modified residuei | 82 | Dimethylated arginine; alternateBy similarity | 1 | |
Modified residuei | 82 | Omega-N-methylarginine; alternateBy similarity | 1 | |
Cross-linki | 173 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)1 Publication | ||
Modified residuei | 435 | Phosphoserine; by PRKX; in vitroPROSITE-ProRule annotation1 Publication | 1 |
Post-translational modificationi
Keywords - PTMi
Isopeptide bond, Methylation, Phosphoprotein, Ubl conjugationProteomic databases
MassIVEi | O43541 |
MaxQBi | O43541 |
PaxDbi | O43541 |
PeptideAtlasi | O43541 |
PRIDEi | O43541 |
ProteomicsDBi | 49038 [O43541-1] 49039 [O43541-2] 49040 [O43541-4] |
PTM databases
iPTMneti | O43541 |
PhosphoSitePlusi | O43541 |
Expressioni
Tissue specificityi
Gene expression databases
Bgeei | ENSG00000137834, Expressed in upper lobe of lung and 225 other tissues |
ExpressionAtlasi | O43541, baseline and differential |
Genevisiblei | O43541, HS |
Organism-specific databases
HPAi | ENSG00000137834, Tissue enhanced (lung) |
Interactioni
Subunit structurei
Interacts with NEDD4L (By similarity).
Interacts with WWP1 (By similarity).
Interacts with STAMBP and PRKX.
Interacts with RNF111 and AXIN1.
Interacts with TGF-beta type I receptor superfamily members, including ACVR1B, BMPR1B and TGFBR1. In response to BMP2, but not to TGFB treatment, interacts with SMAD1, but not with SMAD2, nor with SMAD4; this interaction may inhibit SMAD1 binding to SMAD4.
Interacts with HOXC8 and HOXC9.
Interacts with PELI1; this interaction interferes with PELI1 complex formation with TRAF6, IRAK1, IRAK4 and MYD88 in response to IL1B and hence negatively regulates IL1R-TLR signaling.
By similarity7 PublicationsBinary interactionsi
O43541
With | #Exp. | IntAct |
---|---|---|
PRKX [P51817] | 5 | EBI-976374,EBI-4302903 |
RUNX2 [Q13950] | 3 | EBI-976374,EBI-976402 |
SMAD1 [Q15797] | 4 | EBI-976374,EBI-1567153 |
itself | 2 | EBI-976374,EBI-976374 |
Isoform B [O43541-2]
With | #Exp. | IntAct |
---|---|---|
STAMBP [O95630] | 2 | EBI-4324970,EBI-396676 |
GO - Molecular functioni
- co-SMAD binding Source: BHF-UCL
- identical protein binding Source: IntAct
- I-SMAD binding Source: BHF-UCL
- R-SMAD binding Source: BHF-UCL
- type I activin receptor binding Source: BHF-UCL
- type I transforming growth factor beta receptor binding Source: BHF-UCL
- ubiquitin protein ligase binding Source: BHF-UCL
Protein-protein interaction databases
BioGRIDi | 110266, 51 interactors |
CORUMi | O43541 |
DIPi | DIP-36708N |
IntActi | O43541, 14 interactors |
MINTi | O43541 |
STRINGi | 9606.ENSP00000288840 |
Miscellaneous databases
RNActi | O43541, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 148 – 275 | MH1PROSITE-ProRule annotationAdd BLAST | 128 | |
Domaini | 331 – 496 | MH2PROSITE-ProRule annotationAdd BLAST | 166 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 116 | DisorderedSequence analysisAdd BLAST | 116 | |
Regioni | 136 – 156 | DisorderedSequence analysisAdd BLAST | 21 |
Sequence similaritiesi
Phylogenomic databases
eggNOGi | KOG3701, Eukaryota |
GeneTreei | ENSGT00940000158146 |
HOGENOMi | CLU_026736_2_1_1 |
InParanoidi | O43541 |
OMAi | CKSFGAQ |
OrthoDBi | 395665at2759 |
PhylomeDBi | O43541 |
TreeFami | TF314923 |
Family and domain databases
Gene3Di | 2.60.200.10, 1 hit 3.90.520.10, 1 hit |
InterProi | View protein in InterPro IPR013790, Dwarfin IPR003619, MAD_homology1_Dwarfin-type IPR013019, MAD_homology_MH1 IPR017855, SMAD-like_dom_sf IPR001132, SMAD_dom_Dwarfin-type IPR008984, SMAD_FHA_dom_sf IPR036578, SMAD_MH1_sf |
PANTHERi | PTHR13703, PTHR13703, 1 hit |
Pfami | View protein in Pfam PF03165, MH1, 1 hit PF03166, MH2, 1 hit |
SMARTi | View protein in SMART SM00523, DWA, 1 hit SM00524, DWB, 1 hit |
SUPFAMi | SSF49879, SSF49879, 1 hit SSF56366, SSF56366, 1 hit |
PROSITEi | View protein in PROSITE PS51075, MH1, 1 hit PS51076, MH2, 1 hit |
s (3+)i Sequence
Sequence statusi: Complete.
This entry describes 3 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 3 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MFRSKRSGLV RRLWRSRVVP DREEGGSGGG GGGDEDGSLG SRAEPAPRAR
60 70 80 90 100
EGGGCGRSEV RPVAPRRPRD AVGQRGAQGA GRRRRAGGPP RPMSEPGAGA
110 120 130 140 150
GSSLLDVAEP GGPGWLPESD CETVTCCLFS ERDAAGAPRD ASDPLAGAAL
160 170 180 190 200
EPAGGGRSRE ARSRLLLLEQ ELKTVTYSLL KRLKERSLDT LLEAVESRGG
210 220 230 240 250
VPGGCVLVPR ADLRLGGQPA PPQLLLGRLF RWPDLQHAVE LKPLCGCHSF
260 270 280 290 300
AAAADGPTVC CNPYHFSRLC GPESPPPPYS RLSPRDEYKP LDLSDSTLSY
310 320 330 340 350
TETEATNSLI TAPGEFSDAS MSPDATKPSH WCSVAYWEHR TRVGRLYAVY
360 370 380 390 400
DQAVSIFYDL PQGSGFCLGQ LNLEQRSESV RRTRSKIGFG ILLSKEPDGV
410 420 430 440 450
WAYNRGEHPI FVNSPTLDAP GGRALVVRKV PPGYSIKVFD FERSGLQHAP
460 470 480 490
EPDAADGPYD PNSVRISFAK GWGPCYSRQF ITSCPCWLEI LLNNPR
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketH0YM33 | H0YM33_HUMAN | Mothers against decapentaplegic hom... | SMAD6 | 62 | Annotation score: | ||
H0YK80 | H0YK80_HUMAN | Mothers against decapentaplegic hom... | SMAD6 | 55 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 21 | D → N in AAB94137 (PubMed:9436979).Curated | 1 |
Natural variant
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural variantiVAR_084468 | 14 – 496 | Missing in AOVD2. 1 PublicationAdd BLAST | 483 | |
Natural variantiVAR_084469 | 75 – 496 | Missing Probable disease-associated variant found in a patient with radioulnar synostosis and macrocephaly; associated with disease susceptibility. 1 PublicationAdd BLAST | 422 | |
Natural variantiVAR_084470 | 115 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 382 | |
Natural variantiVAR_084471 | 130 – 496 | Missing Probable disease-associated variant found in a patient with radioulnar synostosis and microcephaly; associated with disease susceptibility. 1 PublicationAdd BLAST | 367 | |
Natural variantiVAR_084472 | 187 | S → L in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1359442505EnsemblClinVar. | 1 | |
Natural variantiVAR_084473 | 204 | G → A in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs768542939EnsemblClinVar. | 1 | |
Natural variantiVAR_084474 | 205 | C → S in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1595757271EnsemblClinVar. | 1 | |
Natural variantiVAR_078924 | 223 – 496 | Missing in CRS7; associated with disease susceptibility. 1 PublicationAdd BLAST | 274 | |
Natural variantiVAR_084475 | 231 | R → G in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1395007983EnsemblClinVar. | 1 | |
Natural variantiVAR_084476 | 231 | R → P in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1419095990EnsemblClinVar. | 1 | |
Natural variantiVAR_084477 | 267 | S → N in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1396117157EnsemblClinVar. | 1 | |
Natural variantiVAR_084478 | 279 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 218 | |
Natural variantiVAR_078925 | 287 | E → K in CRS7; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs570279865EnsemblClinVar. | 1 | |
Natural variantiVAR_084479 | 300 – 496 | Missing Probable disease-associated variant found in a patient with radioulnar synostosis, pectus carinatum and macrocephaly. 1 PublicationAdd BLAST | 197 | |
Natural variantiVAR_077592 | 306 | T → A in CRS7; associated with disease susceptibility. 1 Publication | 1 | |
Natural variantiVAR_084480 | 315 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 182 | |
Natural variantiVAR_077593 | 323 | P → L in CRS7; associated with disease susceptibility. 1 PublicationCorresponds to variant dbSNP:rs1374099442Ensembl. | 1 | |
Natural variantiVAR_068074 | 325 | A → T Found in a patient with congenital mitral valve prolapse. 1 PublicationCorresponds to variant dbSNP:rs199822239EnsemblClinVar. | 1 | |
Natural variantiVAR_084481 | 335 | A → E in AOVD2; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs900988907EnsemblClinVar. | 1 | |
Natural variantiVAR_084482 | 339 | H → P in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs142278375EnsemblClinVar. | 1 | |
Natural variantiVAR_084483 | 350 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 147 | |
Natural variantiVAR_084484 | 370 | Q → R in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1567115899EnsemblClinVar. | 1 | |
Natural variantiVAR_078926 | 374 – 496 | Missing in CRS7; associated with disease susceptibility. 1 PublicationAdd BLAST | 123 | |
Natural variantiVAR_077594 | 390 | G → C in CRS7; associated with disease susceptibility; de novo mutation. 1 Publication | 1 | |
Natural variantiVAR_084485 | 391 | I → IGI in AOVD2; decreased inhibition of BMP signaling pathway. 1 Publication | 1 | |
Natural variantiVAR_078927 | 407 – 496 | Missing in CRS7; associated with disease susceptibility. 1 PublicationAdd BLAST | 90 | |
Natural variantiVAR_068075 | 415 | P → L in AOVD2; decreased inhibition of BMP signaling pathway. 1 PublicationCorresponds to variant dbSNP:rs387907284EnsemblClinVar. | 1 | |
Natural variantiVAR_084486 | 447 – 496 | Missing in RUS; associated with disease susceptibility. 1 PublicationAdd BLAST | 50 | |
Natural variantiVAR_077595 | 465 | R → C in CRS7; associated with disease susceptibility. 1 PublicationCorresponds to variant dbSNP:rs761888345EnsemblClinVar. | 1 | |
Natural variantiVAR_084487 | 471 | G → D in RUS; unknown pathological significance. 1 PublicationCorresponds to variant dbSNP:rs1595805424EnsemblClinVar. | 1 | |
Natural variantiVAR_068076 | 484 | C → F in AOVD2; decreased inhibition of BMP signaling pathway. 2 PublicationsCorresponds to variant dbSNP:rs387907283EnsemblClinVar. | 1 | |
Natural variantiVAR_078928 | 490 | I → T in CRS7; associated with disease susceptibility. 1 PublicationCorresponds to variant dbSNP:rs1338294058Ensembl. | 1 |
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_006179 | 1 – 261 | Missing in isoform B. 1 PublicationAdd BLAST | 261 | |
Alternative sequenceiVSP_006180 | 262 – 273 | NPYHF…LCGPE → MSRMGKPIETQK in isoform B. 1 PublicationAdd BLAST | 12 | |
Alternative sequenceiVSP_035489 | 318 – 338 | DASMS…VAYWE → AADAGIGSRGNRGLESSVPC S in isoform D. 1 PublicationAdd BLAST | 21 | |
Alternative sequenceiVSP_035490 | 339 – 496 | Missing in isoform D. 1 PublicationAdd BLAST | 158 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U59914 mRNA Translation: AAC50792.1 AF035528 mRNA Translation: AAB94137.1 AF043640 mRNA Translation: AAC00497.1 AF037469 mRNA Translation: AAC82331.1 AF041065 , AF041062, AF041063, AF041064 Genomic DNA Translation: AAF14343.1 AM909653 mRNA Translation: CAP20377.1 BC012986 mRNA Translation: AAH12986.1 AF101474 Genomic DNA Translation: AAF06841.1 |
CCDSi | CCDS10221.1 [O43541-1] |
RefSeqi | NP_005576.3, NM_005585.4 [O43541-1] XP_011519863.1, XM_011521561.2 [O43541-2] |
Genome annotation databases
Ensembli | ENST00000288840; ENSP00000288840; ENSG00000137834 ENST00000557916; ENSP00000452955; ENSG00000137834 [O43541-4] |
GeneIDi | 4091 |
KEGGi | hsa:4091 |
MANE-Selecti | ENST00000288840.10; ENSP00000288840.5; NM_005585.5; NP_005576.3 |
UCSCi | uc002aqf.4, human [O43541-1] |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U59914 mRNA Translation: AAC50792.1 AF035528 mRNA Translation: AAB94137.1 AF043640 mRNA Translation: AAC00497.1 AF037469 mRNA Translation: AAC82331.1 AF041065 , AF041062, AF041063, AF041064 Genomic DNA Translation: AAF14343.1 AM909653 mRNA Translation: CAP20377.1 BC012986 mRNA Translation: AAH12986.1 AF101474 Genomic DNA Translation: AAF06841.1 |
CCDSi | CCDS10221.1 [O43541-1] |
RefSeqi | NP_005576.3, NM_005585.4 [O43541-1] XP_011519863.1, XM_011521561.2 [O43541-2] |
3D structure databases
SMRi | O43541 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 110266, 51 interactors |
CORUMi | O43541 |
DIPi | DIP-36708N |
IntActi | O43541, 14 interactors |
MINTi | O43541 |
STRINGi | 9606.ENSP00000288840 |
PTM databases
iPTMneti | O43541 |
PhosphoSitePlusi | O43541 |
Genetic variation databases
BioMutai | SMAD6 |
Proteomic databases
MassIVEi | O43541 |
MaxQBi | O43541 |
PaxDbi | O43541 |
PeptideAtlasi | O43541 |
PRIDEi | O43541 |
ProteomicsDBi | 49038 [O43541-1] 49039 [O43541-2] 49040 [O43541-4] |
Protocols and materials databases
Antibodypediai | 13795, 579 antibodies from 36 providers |
DNASUi | 4091 |
Genome annotation databases
Ensembli | ENST00000288840; ENSP00000288840; ENSG00000137834 ENST00000557916; ENSP00000452955; ENSG00000137834 [O43541-4] |
GeneIDi | 4091 |
KEGGi | hsa:4091 |
MANE-Selecti | ENST00000288840.10; ENSP00000288840.5; NM_005585.5; NP_005576.3 |
UCSCi | uc002aqf.4, human [O43541-1] |
Organism-specific databases
CTDi | 4091 |
DisGeNETi | 4091 |
GeneCardsi | SMAD6 |
HGNCi | HGNC:6772, SMAD6 |
HPAi | ENSG00000137834, Tissue enhanced (lung) |
MalaCardsi | SMAD6 |
MIMi | 179300, phenotype 602931, gene 614823, phenotype 617439, phenotype |
neXtProti | NX_O43541 |
OpenTargetsi | ENSG00000137834 |
Orphaneti | 3269, Congenital radioulnar synostosis 402075, Familial bicuspid aortic valve |
PharmGKBi | PA30529 |
VEuPathDBi | HostDB:ENSG00000137834 |
GenAtlasi | Search... |
Phylogenomic databases
eggNOGi | KOG3701, Eukaryota |
GeneTreei | ENSGT00940000158146 |
HOGENOMi | CLU_026736_2_1_1 |
InParanoidi | O43541 |
OMAi | CKSFGAQ |
OrthoDBi | 395665at2759 |
PhylomeDBi | O43541 |
TreeFami | TF314923 |
Enzyme and pathway databases
PathwayCommonsi | O43541 |
Reactomei | R-HSA-201451, Signaling by BMP R-HSA-8941326, RUNX2 regulates bone development |
SignaLinki | O43541 |
SIGNORi | O43541 |
Miscellaneous databases
BioGRID-ORCSi | 4091, 23 hits in 1067 CRISPR screens |
ChiTaRSi | SMAD6, human |
GeneWikii | Mothers_against_decapentaplegic_homolog_6 |
GenomeRNAii | 4091 |
Pharosi | O43541, Tbio |
PROi | PR:O43541 |
RNActi | O43541, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSG00000137834, Expressed in upper lobe of lung and 225 other tissues |
ExpressionAtlasi | O43541, baseline and differential |
Genevisiblei | O43541, HS |
Family and domain databases
Gene3Di | 2.60.200.10, 1 hit 3.90.520.10, 1 hit |
InterProi | View protein in InterPro IPR013790, Dwarfin IPR003619, MAD_homology1_Dwarfin-type IPR013019, MAD_homology_MH1 IPR017855, SMAD-like_dom_sf IPR001132, SMAD_dom_Dwarfin-type IPR008984, SMAD_FHA_dom_sf IPR036578, SMAD_MH1_sf |
PANTHERi | PTHR13703, PTHR13703, 1 hit |
Pfami | View protein in Pfam PF03165, MH1, 1 hit PF03166, MH2, 1 hit |
SMARTi | View protein in SMART SM00523, DWA, 1 hit SM00524, DWB, 1 hit |
SUPFAMi | SSF49879, SSF49879, 1 hit SSF56366, SSF56366, 1 hit |
PROSITEi | View protein in PROSITE PS51075, MH1, 1 hit PS51076, MH2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | SMAD6_HUMAN | |
Accessioni | O43541Primary (citable) accession number: O43541 Secondary accession number(s): A9J6M5 Q9UKZ3 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 4, 2001 |
Last sequence update: | October 3, 2006 | |
Last modified: | February 23, 2022 | |
This is version 199 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Human chromosome 15
Human chromosome 15: entries, gene names and cross-references to MIM - Human entries with genetic variants
List of human entries with genetic variants - Human variants curated from literature reports
Index of human variants curated from literature reports - MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot - SIMILARITY comments
Index of protein domains and families