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Protein

HTH-type transcriptional regulator YtlI

Gene

ytlI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Positively regulates the expression of ytmI operon in response to the availability of sulfur sources.2 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU29400-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator YtlI
Gene namesi
Name:ytlI
Ordered Locus Names:BSU29400
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001058201 – 308HTH-type transcriptional regulator YtlIAdd BLAST308

Proteomic databases

PaxDbiO35038
PRIDEiO35038

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100016046

Structurei

3D structure databases

ProteinModelPortaliO35038
SMRiO35038
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 57HTH lysR-typePROSITE-ProRule annotationAdd BLAST57

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4108KSA Bacteria
ENOG410XQIB LUCA
HOGENOMiHOG000009116
InParanoidiO35038
KOiK21960
OMAiQSTVTMQ
PhylomeDBiO35038

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

O35038-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MELRSIKTFH TIVKFGSFYK AAEILNYSQP TISMRMKQLE QDLGVLLFER
60 70 80 90 100
GKSLQLTKAG KLFYERTGDL LMQYEALKHN LSDLKEEEAG IINIGVSEPT
110 120 130 140 150
ASLIFPEILK DFLMDYPKIT VNIKVDDANT CSQKLLDGTI DFAVCGEPEL
160 170 180 190 200
ILENYYHPFF YDTLNVIVSD QHPLAEKKAV HLSDLAEERF IFTPANCPIR
210 220 230 240 250
LQIEQHLHRE LGNRYKKMEL TSSMSHEYYV RENIGISIFT STAHSKPFNG
260 270 280 290 300
TKVIPILNLD ITPPIGLLTN QKEVHFDRAT KDLIARITKR FQQRSKELEG

TSDKTITG
Length:308
Mass (Da):35,233
Last modified:January 1, 1998 - v1
Checksum:iCF3773D9CAE34F56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF008220 Genomic DNA Translation: AAC00402.1
AL009126 Genomic DNA Translation: CAB14900.1
PIRiE69995
RefSeqiNP_390818.1, NC_000964.3
WP_004398915.1, NZ_JNCM01000036.1

Genome annotation databases

EnsemblBacteriaiCAB14900; CAB14900; BSU29400
GeneIDi938452
KEGGibsu:BSU29400
PATRICifig|224308.179.peg.3194

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF008220 Genomic DNA Translation: AAC00402.1
AL009126 Genomic DNA Translation: CAB14900.1
PIRiE69995
RefSeqiNP_390818.1, NC_000964.3
WP_004398915.1, NZ_JNCM01000036.1

3D structure databases

ProteinModelPortaliO35038
SMRiO35038
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100016046

Proteomic databases

PaxDbiO35038
PRIDEiO35038

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB14900; CAB14900; BSU29400
GeneIDi938452
KEGGibsu:BSU29400
PATRICifig|224308.179.peg.3194

Phylogenomic databases

eggNOGiENOG4108KSA Bacteria
ENOG410XQIB LUCA
HOGENOMiHOG000009116
InParanoidiO35038
KOiK21960
OMAiQSTVTMQ
PhylomeDBiO35038

Enzyme and pathway databases

BioCyciBSUB:BSU29400-MONOMER

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiYTLI_BACSU
AccessioniPrimary (citable) accession number: O35038
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: October 10, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
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Main funding by: National Institutes of Health

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