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Entry version 98 (07 Apr 2021)
Sequence version 1 (01 Jan 1998)
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Protein

Uncharacterized protein YvnB

Gene

yvnB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
BSUB:BSU35040-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein YvnB
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:yvnB
Ordered Locus Names:BSU35040
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus subtilis (strain 168)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri224308 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001570 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 23Sequence analysisAdd BLAST23
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000036109424 – 1289Uncharacterized protein YvnBAdd BLAST1266

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
O34986

PRoteomics IDEntifications database

More...
PRIDEi
O34986

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
224308.BSU35040

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini141 – 277LTDPROSITE-ProRule annotationAdd BLAST137

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Signal

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
COG1409, Bacteria

Identification of Orthologs from Complete Genome Data

More...
OMAi
IRYRYPK

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.60.21.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR004843, Calcineurin-like_PHP_ApaH
IPR001322, Lamin_tail_dom
IPR036415, Lamin_tail_dom_sf
IPR029052, Metallo-depent_PP-like
IPR011401, Pesterase_YvnB

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00149, Metallophos, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF036444, Pesterase_YvnB, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF74853, SSF74853, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51841, LTD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

O34986-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRKYTVIASI LLSFLSVLSG GHHESKAFPV VQQELFQTPH YIPLLENPPQ
60 70 80 90 100
IDVKAEMRSN LMIEAQVRDN SYQAFSAFLF YKQSNELGYK MVPMDPTPGA
110 120 130 140 150
VRKFLAQIPK RLIWNSELEY YIVMSNGKQR VESETKKLKL EGYQADLAHI
160 170 180 190 200
PELLITELAV DTKNIGRADG YEFIEIFNTT DRTIDFKDYH IRYRYPKEGP
210 220 230 240 250
DSDLIWRPDE RILIPSGETF VVWLKPAGHP ELTSADFNRY YQTQLKEGKN
260 270 280 290 300
LAVIDETEGM ANTRPRAVVI STNTGKDISV AHYRKHALRR LSSVLYKYPL
310 320 330 340 350
NGTAELLNIS IGEKNPSPGT VLQAQVPDQK RKIKLDKEKP VIEDLTDRKP
360 370 380 390 400
VRPAESIELR ADIRDRSLVK TVAFYYRTDE NKPFKRILAE KDRNDNLFHY
410 420 430 440 450
IVYSPELIGK DQLEYYVAAG DGINEARTPV KMIDIKQTSK AHGLRMNIEN
460 470 480 490 500
RDTLSGTQFL KATTEGRADS IKLWIDGKKQ VTEPAMEKEV YFAFDTRKTN
510 520 530 540 550
LYFKNAVTME GKVLKVFDDT TNKYRTYSVP LPETLLRKGK QLQRITIRSG
560 570 580 590 600
SKVSPFDTAE NRDDFLVKNA RLVLSDGTVI RDQRVSPEKE LFIGDNQRSN
610 620 630 640 650
KSWQFQFNLP DGLFTSQLLE WDTSKLSEGA HHIQASDGKE NVSLVVRVDN
660 670 680 690 700
SGPHIEPNIT EGQTYKGNLI LQADMYDKWS RIEEAEASLD GESITLPYHT
710 720 730 740 750
SSSDLLPGKH SLKVTATDLA GNKTVIERIF KTEREHPDQP EVIDSEADTH
760 770 780 790 800
KAKLSVRVKD PTNDAMDVGF YRGFQYTARN HVKIFKHASL TEPPKSFVPE
810 820 830 840 850
RETPFTNKEL ERVSAADGKT VSTENKELFP YHRFEVTVDP SIDENDLAES
860 870 880 890 900
VWKGSSLPGR KVTMYAWNYR TNEWQPVDSF VAKDDKPFTL KASVIAADFV
910 920 930 940 950
RESKMNVIVQ DEIPPAKDMY TFVWMSDTQY YAESYPHIFD KQTEWIKDNQ
960 970 980 990 1000
KQLNIKYVFH TGDIVDDSAD IRQWKNADRS MSVLDKSGIP YGVLAGNHDV
1010 1020 1030 1040 1050
GHKDGSYRAF GKYFGSDRFD KKFHYGGSYK NNRGHYDLIS SNGNDYIMLY
1060 1070 1080 1090 1100
MGWGITDEDI AWMNQVLKKH PDRMAILAFH EYLLVSGNRS PIGEKIFKEI
1110 1120 1130 1140 1150
VKPNPNVVMV LSGHYHSAMR KTDELDDDGD GKPDRLVHQM LADYQGGPEG
1160 1170 1180 1190 1200
GQGYLRLLQF DQANDMVHVS TYSPYVKDKN YYDTDTYGNK DEFSLSLDLK
1210 1220 1230 1240 1250
PRIKKVETDY FECNVYTNEE LGKREQVKSG DTAEFRWDHL EPQSVYYWYI
1260 1270 1280
IVEDSFNGKT KSPIWKFKTK KETYRPAPDQ FDFRHVSNP
Length:1,289
Mass (Da):148,108
Last modified:January 1, 1998 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF4D80691FF5C78F3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF017113 Genomic DNA Translation: AAC67282.1
AL009126 Genomic DNA Translation: CAB15509.1

Protein sequence database of the Protein Information Resource

More...
PIRi
C70044

NCBI Reference Sequences

More...
RefSeqi
NP_391384.1, NC_000964.3
WP_003228085.1, NZ_JNCM01000033.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
CAB15509; CAB15509; BSU_35040

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
936623

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bsu:BSU35040

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|224308.179.peg.3792

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF017113 Genomic DNA Translation: AAC67282.1
AL009126 Genomic DNA Translation: CAB15509.1
PIRiC70044
RefSeqiNP_391384.1, NC_000964.3
WP_003228085.1, NZ_JNCM01000033.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi224308.BSU35040

Proteomic databases

PaxDbiO34986
PRIDEiO34986

Genome annotation databases

EnsemblBacteriaiCAB15509; CAB15509; BSU_35040
GeneIDi936623
KEGGibsu:BSU35040
PATRICifig|224308.179.peg.3792

Phylogenomic databases

eggNOGiCOG1409, Bacteria
OMAiIRYRYPK

Enzyme and pathway databases

BioCyciBSUB:BSU35040-MONOMER

Family and domain databases

Gene3Di3.60.21.10, 1 hit
InterProiView protein in InterPro
IPR004843, Calcineurin-like_PHP_ApaH
IPR001322, Lamin_tail_dom
IPR036415, Lamin_tail_dom_sf
IPR029052, Metallo-depent_PP-like
IPR011401, Pesterase_YvnB
PfamiView protein in Pfam
PF00149, Metallophos, 1 hit
PIRSFiPIRSF036444, Pesterase_YvnB, 1 hit
SUPFAMiSSF74853, SSF74853, 1 hit
PROSITEiView protein in PROSITE
PS51841, LTD, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiYVNB_BACSU
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O34986
Secondary accession number(s): Q795E8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: April 7, 2021
This is version 98 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome
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