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UniProtKB - O34986 (YVNB_BACSU)

Entry version 98 (07 Apr 2021)
Sequence version 1 (01 Jan 1998)
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Protein

Uncharacterized protein YvnB

Gene

yvnB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		BSUB:BSU35040-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein YvnB
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:yvnB
Ordered Locus Names:BSU35040
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus subtilis (strain 168)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri224308 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001570 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 23Sequence analysisAdd BLAST23
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000036109424 – 1289Uncharacterized protein YvnBAdd BLAST1266

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		O34986

PRoteomics IDEntifications database

More...PRIDEi		O34986

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		224308.BSU35040

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini141 – 277LTDPROSITE-ProRule annotationAdd BLAST137

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Signal

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		COG1409, Bacteria

Identification of Orthologs from Complete Genome Data

More...OMAi		IRYRYPK

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.60.21.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR004843, Calcineurin-like_PHP_ApaH
IPR001322, Lamin_tail_dom
IPR036415, Lamin_tail_dom_sf
IPR029052, Metallo-depent_PP-like
IPR011401, Pesterase_YvnB

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00149, Metallophos, 1 hit

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF036444, Pesterase_YvnB, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF74853, SSF74853, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51841, LTD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

O34986-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRKYTVIASI LLSFLSVLSG GHHESKAFPV VQQELFQTPH YIPLLENPPQ 
        60         70         80         90        100
IDVKAEMRSN LMIEAQVRDN SYQAFSAFLF YKQSNELGYK MVPMDPTPGA 
       110        120        130        140        150
VRKFLAQIPK RLIWNSELEY YIVMSNGKQR VESETKKLKL EGYQADLAHI 
       160        170        180        190        200
PELLITELAV DTKNIGRADG YEFIEIFNTT DRTIDFKDYH IRYRYPKEGP 
       210        220        230        240        250
DSDLIWRPDE RILIPSGETF VVWLKPAGHP ELTSADFNRY YQTQLKEGKN 
       260        270        280        290        300
LAVIDETEGM ANTRPRAVVI STNTGKDISV AHYRKHALRR LSSVLYKYPL 
       310        320        330        340        350
NGTAELLNIS IGEKNPSPGT VLQAQVPDQK RKIKLDKEKP VIEDLTDRKP 
       360        370        380        390        400
VRPAESIELR ADIRDRSLVK TVAFYYRTDE NKPFKRILAE KDRNDNLFHY 
       410        420        430        440        450
IVYSPELIGK DQLEYYVAAG DGINEARTPV KMIDIKQTSK AHGLRMNIEN 
       460        470        480        490        500
RDTLSGTQFL KATTEGRADS IKLWIDGKKQ VTEPAMEKEV YFAFDTRKTN 
       510        520        530        540        550
LYFKNAVTME GKVLKVFDDT TNKYRTYSVP LPETLLRKGK QLQRITIRSG 
       560        570        580        590        600
SKVSPFDTAE NRDDFLVKNA RLVLSDGTVI RDQRVSPEKE LFIGDNQRSN 
       610        620        630        640        650
KSWQFQFNLP DGLFTSQLLE WDTSKLSEGA HHIQASDGKE NVSLVVRVDN 
       660        670        680        690        700
SGPHIEPNIT EGQTYKGNLI LQADMYDKWS RIEEAEASLD GESITLPYHT 
       710        720        730        740        750
SSSDLLPGKH SLKVTATDLA GNKTVIERIF KTEREHPDQP EVIDSEADTH 
       760        770        780        790        800
KAKLSVRVKD PTNDAMDVGF YRGFQYTARN HVKIFKHASL TEPPKSFVPE 
       810        820        830        840        850
RETPFTNKEL ERVSAADGKT VSTENKELFP YHRFEVTVDP SIDENDLAES 
       860        870        880        890        900
VWKGSSLPGR KVTMYAWNYR TNEWQPVDSF VAKDDKPFTL KASVIAADFV 
       910        920        930        940        950
RESKMNVIVQ DEIPPAKDMY TFVWMSDTQY YAESYPHIFD KQTEWIKDNQ 
       960        970        980        990       1000
KQLNIKYVFH TGDIVDDSAD IRQWKNADRS MSVLDKSGIP YGVLAGNHDV 
      1010       1020       1030       1040       1050
GHKDGSYRAF GKYFGSDRFD KKFHYGGSYK NNRGHYDLIS SNGNDYIMLY 
      1060       1070       1080       1090       1100
MGWGITDEDI AWMNQVLKKH PDRMAILAFH EYLLVSGNRS PIGEKIFKEI 
      1110       1120       1130       1140       1150
VKPNPNVVMV LSGHYHSAMR KTDELDDDGD GKPDRLVHQM LADYQGGPEG 
      1160       1170       1180       1190       1200
GQGYLRLLQF DQANDMVHVS TYSPYVKDKN YYDTDTYGNK DEFSLSLDLK 
      1210       1220       1230       1240       1250
PRIKKVETDY FECNVYTNEE LGKREQVKSG DTAEFRWDHL EPQSVYYWYI 
      1260       1270       1280 
IVEDSFNGKT KSPIWKFKTK KETYRPAPDQ FDFRHVSNP
Length:1,289
Mass (Da):148,108
Last modified:January 1, 1998 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF4D80691FF5C78F3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AF017113 Genomic DNA Translation: AAC67282.1
AL009126 Genomic DNA Translation: CAB15509.1

Protein sequence database of the Protein Information Resource

More...PIRi		C70044

NCBI Reference Sequences

More...RefSeqi		NP_391384.1, NC_000964.3
WP_003228085.1, NZ_JNCM01000033.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		CAB15509; CAB15509; BSU_35040

Database of genes from NCBI RefSeq genomes

More...GeneIDi		936623

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		bsu:BSU35040

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|224308.179.peg.3792

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF017113 Genomic DNA Translation: AAC67282.1
AL009126 Genomic DNA Translation: CAB15509.1
PIRiC70044
RefSeqiNP_391384.1, NC_000964.3
WP_003228085.1, NZ_JNCM01000033.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi224308.BSU35040

Proteomic databases

PaxDbiO34986
PRIDEiO34986

Genome annotation databases

EnsemblBacteriaiCAB15509; CAB15509; BSU_35040
GeneIDi936623
KEGGibsu:BSU35040
PATRICifig|224308.179.peg.3792

Phylogenomic databases

eggNOGiCOG1409, Bacteria
OMAiIRYRYPK

Enzyme and pathway databases

BioCyciBSUB:BSU35040-MONOMER

Family and domain databases

Gene3Di3.60.21.10, 1 hit
InterProiView protein in InterPro
IPR004843, Calcineurin-like_PHP_ApaH
IPR001322, Lamin_tail_dom
IPR036415, Lamin_tail_dom_sf
IPR029052, Metallo-depent_PP-like
IPR011401, Pesterase_YvnB
PfamiView protein in Pfam
PF00149, Metallophos, 1 hit
PIRSFiPIRSF036444, Pesterase_YvnB, 1 hit
SUPFAMiSSF74853, SSF74853, 1 hit
PROSITEiView protein in PROSITE
PS51841, LTD, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiYVNB_BACSU
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O34986
Secondary accession number(s): Q795E8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: April 7, 2021
This is version 98 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome
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